Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_09730

Experiment: LB_Aerobic_18HR_ZN18A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB_Aerobic_18HR_ZN18A
2,093,376	+				+0.3
2,093,376	+				+0.3
2,093,396	+				-0.0
2,093,423	+				-0.1
2,093,549	+				-0.5
2,093,666	+		CSW01_09725	0.19	-0.0
2,093,708	+		CSW01_09725	0.23	-0.0
2,093,749	-		CSW01_09725	0.28	-1.1
2,093,805	+		CSW01_09725	0.35	+0.4
2,093,825	+		CSW01_09725	0.37	-1.0
2,093,866	-		CSW01_09725	0.42	+0.2
2,093,866	-		CSW01_09725	0.42	-0.1
2,093,890	+		CSW01_09725	0.44	+0.6
2,093,896	+		CSW01_09725	0.45	+0.2
2,094,000	+		CSW01_09725	0.57	-1.0
2,094,096	+		CSW01_09725	0.68	+1.1
2,094,096	+		CSW01_09725	0.68	-0.7
2,094,104	-		CSW01_09725	0.69	-0.2
2,094,110	+		CSW01_09725	0.70	-0.1
2,094,110	+		CSW01_09725	0.70	-0.9
2,094,118	-		CSW01_09725	0.71	-2.9
2,094,128	-		CSW01_09725	0.72	+0.4
2,094,160	+		CSW01_09725	0.76	+0.6
2,094,167	+		CSW01_09725	0.77	-3.5
2,094,175	+		CSW01_09725	0.77	+0.5
2,094,180	-		CSW01_09725	0.78	+1.2
2,094,180	-		CSW01_09725	0.78	+0.4
2,094,200	+		CSW01_09725	0.80	-0.1
2,094,265	-		CSW01_09725	0.88	+0.2
2,094,330	-				+1.8
2,094,346	-				+0.1
2,094,393	+				+1.6
2,094,401	-				-0.1
2,094,401	-				+1.5
2,094,402	+				+0.3
2,094,418	+				+0.4
2,094,418	+				-1.6
2,094,418	+				-0.3
2,094,426	-				-0.3
2,094,426	-				+1.2
2,094,426	-				+1.8
2,094,426	-				+0.2
2,094,426	-				-1.8
2,094,426	-				-0.2
2,094,426	-				-0.1
2,094,428	+				-1.0
2,094,436	+				+0.5
2,094,436	-				+0.3
2,094,464	+				+0.0
2,094,511	+		CSW01_09730	0.11	+0.4
2,094,511	+		CSW01_09730	0.11	+0.2
2,094,511	+		CSW01_09730	0.11	-0.1
2,094,511	+		CSW01_09730	0.11	-0.2
2,094,511	+		CSW01_09730	0.11	-0.3
2,094,511	+		CSW01_09730	0.11	-0.5
2,094,511	+		CSW01_09730	0.11	+0.1
2,094,511	+		CSW01_09730	0.11	-0.0
2,094,511	+		CSW01_09730	0.11	+0.2
2,094,511	+		CSW01_09730	0.11	-0.4
2,094,511	+		CSW01_09730	0.11	+0.2
2,094,511	+		CSW01_09730	0.11	-1.4
2,094,511	+		CSW01_09730	0.11	+0.2
2,094,519	-		CSW01_09730	0.11	+1.2
2,094,519	-		CSW01_09730	0.11	-0.4
2,094,519	-		CSW01_09730	0.11	+0.6
2,094,519	-		CSW01_09730	0.11	+1.2
2,094,519	-		CSW01_09730	0.11	-1.3
2,094,519	-		CSW01_09730	0.11	+2.6
2,094,519	-		CSW01_09730	0.11	+0.5
2,094,519	-		CSW01_09730	0.11	+0.6
2,094,519	-		CSW01_09730	0.11	+0.2
2,094,519	-		CSW01_09730	0.11	+0.5
2,094,519	-		CSW01_09730	0.11	+0.8
2,094,519	-		CSW01_09730	0.11	-0.0
2,094,519	-		CSW01_09730	0.11	-0.1
2,094,519	-		CSW01_09730	0.11	-0.4
2,094,519	-		CSW01_09730	0.11	+2.0
2,094,519	-		CSW01_09730	0.11	+0.2
2,094,521	+		CSW01_09730	0.11	+0.3
2,094,555	-		CSW01_09730	0.14	+0.0
2,094,577	-		CSW01_09730	0.15	+0.0
2,094,633	+		CSW01_09730	0.19	-0.4
2,094,739	+		CSW01_09730	0.26	+0.1
2,094,739	+		CSW01_09730	0.26	+0.3
2,094,747	-		CSW01_09730	0.27	+1.8
2,094,747	-		CSW01_09730	0.27	+0.0
2,094,829	+		CSW01_09730	0.32	+0.2
2,094,847	-		CSW01_09730	0.34	+0.9
2,094,970	-		CSW01_09730	0.42	-1.4
2,094,976	+		CSW01_09730	0.42	+0.1
2,095,051	+		CSW01_09730	0.48	-0.1
2,095,118	+		CSW01_09730	0.52	-0.2
2,095,126	-		CSW01_09730	0.53	-0.6
2,095,166	-		CSW01_09730	0.55	+0.2
2,095,189	-		CSW01_09730	0.57	+1.8
2,095,209	-		CSW01_09730	0.58	-0.4
2,095,214	-		CSW01_09730	0.59	+0.5
2,095,233	+		CSW01_09730	0.60	+1.6
2,095,266	-		CSW01_09730	0.62	-1.4
2,095,266	-		CSW01_09730	0.62	+0.2
2,095,280	+		CSW01_09730	0.63	-0.0
2,095,355	+		CSW01_09730	0.68	-0.1
2,095,363	-		CSW01_09730	0.69	+0.8
2,095,367	-		CSW01_09730	0.69	-0.1
2,095,408	+		CSW01_09730	0.72	+0.3
2,095,419	+		CSW01_09730	0.73	+0.2
2,095,419	+		CSW01_09730	0.73	-0.1
2,095,419	+		CSW01_09730	0.73	-0.6
2,095,427	-		CSW01_09730	0.73	-0.1
2,095,483	+		CSW01_09730	0.77	-0.6
2,095,488	+		CSW01_09730	0.77	+0.2
2,095,494	+		CSW01_09730	0.78	+0.1
2,095,496	-		CSW01_09730	0.78	-0.3
2,095,502	-		CSW01_09730	0.78	-0.0
2,095,559	-		CSW01_09730	0.82	+1.0
2,095,571	-		CSW01_09730	0.83	-0.2
2,095,571	-		CSW01_09730	0.83	-0.0
2,095,646	-		CSW01_09730	0.88	+0.1
2,095,671	+				-0.4
2,095,671	+				-0.5
2,095,696	-				-0.4
2,095,713	+				+0.0
2,095,745	+				+0.6
2,095,763	+				+0.0
2,095,763	+				+1.2
2,095,841	-				+0.4
2,095,858	-				-0.2
2,095,922	+				+0.2
2,095,941	+				+0.5
2,095,941	-				+0.6
2,095,945	+				+1.4
2,095,945	+				+0.1
2,095,961	+				-0.7
2,096,197	-		CSW01_09735	0.27	+0.2
2,096,226	+		CSW01_09735	0.30	-0.3
2,096,247	+		CSW01_09735	0.32	+0.6
2,096,278	-		CSW01_09735	0.35	-3.5
2,096,278	-		CSW01_09735	0.35	+0.5
2,096,280	+		CSW01_09735	0.36	+0.2
2,096,288	-		CSW01_09735	0.37	+1.0
2,096,334	-		CSW01_09735	0.42	+0.8
2,096,387	-		CSW01_09735	0.47	-1.4
2,096,475	+		CSW01_09735	0.57	+0.5
2,096,495	+		CSW01_09735	0.59	+0.0
2,096,505	+		CSW01_09735	0.60	+0.6
2,096,581	+		CSW01_09735	0.68	-0.6
2,096,599	-		CSW01_09735	0.70	+0.6
2,096,645	-		CSW01_09735	0.75	+1.6
2,096,645	-		CSW01_09735	0.75	+1.0
2,096,650	-		CSW01_09735	0.75	+0.7
2,096,708	-		CSW01_09735	0.82	+0.0
2,096,720	+		CSW01_09735	0.83	+0.1
2,096,722	+		CSW01_09735	0.83	-1.1
2,096,727	+		CSW01_09735	0.84	+0.3
2,096,728	-		CSW01_09735	0.84	-1.0
2,096,728	-		CSW01_09735	0.84	-0.1
2,096,728	-		CSW01_09735	0.84	+0.3
2,096,730	+		CSW01_09735	0.84	-0.7
2,096,739	+		CSW01_09735	0.85	-0.0
2,096,739	+		CSW01_09735	0.85	-0.1
2,096,739	+		CSW01_09735	0.85	+0.2
2,096,739	+		CSW01_09735	0.85	-0.0
2,096,739	+		CSW01_09735	0.85	-0.2
2,096,739	+		CSW01_09735	0.85	-0.1
2,096,739	+		CSW01_09735	0.85	-0.2
2,096,739	+		CSW01_09735	0.85	+1.2
2,096,739	+		CSW01_09735	0.85	-0.3
2,096,739	+		CSW01_09735	0.85	-0.1
2,096,739	+		CSW01_09735	0.85	-0.2
2,096,739	+		CSW01_09735	0.85	-0.1
2,096,739	+		CSW01_09735	0.85	-0.2
2,096,739	+		CSW01_09735	0.85	-1.8
2,096,740	-		CSW01_09735	0.85	-0.3
2,096,746	-		CSW01_09735	0.86	+1.2
2,096,747	-		CSW01_09735	0.86	+1.8
2,096,747	-		CSW01_09735	0.86	+1.7
2,096,747	-		CSW01_09735	0.86	+0.7
2,096,747	-		CSW01_09735	0.86	+0.9
2,096,747	-		CSW01_09735	0.86	-1.2
2,096,747	-		CSW01_09735	0.86	+1.1
2,096,747	-		CSW01_09735	0.86	+0.6
2,096,747	-		CSW01_09735	0.86	+0.6
2,096,747	-		CSW01_09735	0.86	+1.2
2,096,747	-		CSW01_09735	0.86	-0.7
2,096,747	-		CSW01_09735	0.86	+0.0
2,096,747	-		CSW01_09735	0.86	+0.2
2,096,747	-		CSW01_09735	0.86	-0.0
2,096,747	-		CSW01_09735	0.86	-0.0
2,096,747	-		CSW01_09735	0.86	+0.5
2,096,747	-		CSW01_09735	0.86	-0.4
2,096,747	-		CSW01_09735	0.86	-0.8
2,096,747	-		CSW01_09735	0.86	-0.2
2,096,747	-		CSW01_09735	0.86	+0.3
2,096,747	-		CSW01_09735	0.86	+1.3
2,096,749	+		CSW01_09735	0.86	-0.5
2,096,754	+		CSW01_09735	0.87	+1.6
2,096,755	+		CSW01_09735	0.87	+0.1
2,096,755	+		CSW01_09735	0.87	+0.2
2,096,756	+		CSW01_09735	0.87	+0.1
2,096,762	-		CSW01_09735	0.88	+1.0
2,096,763	-		CSW01_09735	0.88	-0.3
2,096,763	-		CSW01_09735	0.88	+0.6
2,096,791	-				+0.2