Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30045 and AO356_30050 are separated by 15 nucleotides AO356_30050 and AO356_30055 are separated by 75 nucleotides
AO356_30045: AO356_30045 - potassium transporter, at 7,010,085 to 7,011,452
_30045
AO356_30050: AO356_30050 - aminomethyltransferase, at 7,011,468 to 7,013,810
_30050
AO356_30055: AO356_30055 - amino acid permease, at 7,013,886 to 7,015,565
_30055
Position (kb)
7011
7012
7013
7014 Strain fitness (log2 ratio)
-1
0
1 at 7010.740 kb on - strand, within AO356_30045 at 7010.740 kb on - strand, within AO356_30045 at 7010.825 kb on - strand, within AO356_30045 at 7010.980 kb on - strand, within AO356_30045 at 7010.980 kb on - strand, within AO356_30045 at 7011.207 kb on + strand, within AO356_30045 at 7011.207 kb on + strand, within AO356_30045 at 7011.705 kb on - strand, within AO356_30050 at 7012.004 kb on - strand, within AO356_30050 at 7012.495 kb on + strand, within AO356_30050 at 7012.495 kb on + strand, within AO356_30050 at 7012.694 kb on + strand, within AO356_30050 at 7012.829 kb on + strand, within AO356_30050 at 7012.830 kb on - strand, within AO356_30050 at 7012.872 kb on + strand, within AO356_30050 at 7012.872 kb on + strand, within AO356_30050 at 7013.017 kb on - strand, within AO356_30050 at 7013.863 kb on + strand at 7013.879 kb on + strand at 7013.879 kb on + strand at 7013.880 kb on - strand at 7013.897 kb on + strand at 7014.099 kb on + strand, within AO356_30055 at 7014.100 kb on - strand, within AO356_30055 at 7014.100 kb on - strand, within AO356_30055 at 7014.264 kb on + strand, within AO356_30055 at 7014.265 kb on - strand, within AO356_30055 at 7014.397 kb on + strand, within AO356_30055 at 7014.428 kb on + strand, within AO356_30055 at 7014.678 kb on + strand, within AO356_30055 at 7014.678 kb on + strand, within AO356_30055
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 7,010,740 - AO356_30045 0.48 +0.5 7,010,740 - AO356_30045 0.48 -1.4 7,010,825 - AO356_30045 0.54 +0.8 7,010,980 - AO356_30045 0.65 -0.8 7,010,980 - AO356_30045 0.65 -0.6 7,011,207 + AO356_30045 0.82 +0.5 7,011,207 + AO356_30045 0.82 -0.9 7,011,705 - AO356_30050 0.10 -0.2 7,012,004 - AO356_30050 0.23 +0.3 7,012,495 + AO356_30050 0.44 -0.1 7,012,495 + AO356_30050 0.44 +0.8 7,012,694 + AO356_30050 0.52 +0.1 7,012,829 + AO356_30050 0.58 -0.7 7,012,830 - AO356_30050 0.58 +0.9 7,012,872 + AO356_30050 0.60 +0.2 7,012,872 + AO356_30050 0.60 +1.1 7,013,017 - AO356_30050 0.66 +1.7 7,013,863 + +1.0 7,013,879 + +0.5 7,013,879 + +0.5 7,013,880 - +0.2 7,013,897 + -0.4 7,014,099 + AO356_30055 0.13 -0.9 7,014,100 - AO356_30055 0.13 +0.4 7,014,100 - AO356_30055 0.13 -0.8 7,014,264 + AO356_30055 0.23 +1.0 7,014,265 - AO356_30055 0.23 +1.1 7,014,397 + AO356_30055 0.30 -0.1 7,014,428 + AO356_30055 0.32 -1.0 7,014,678 + AO356_30055 0.47 +1.3 7,014,678 + AO356_30055 0.47 +0.4
Or see this region's nucleotide sequence