Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28380 and AO356_28385 are separated by 11 nucleotides AO356_28385 and AO356_28390 are separated by 67 nucleotides AO356_28390 and AO356_28395 are separated by 13 nucleotides
AO356_28380: AO356_28380 - ABC transporter permease, at 6,600,697 to 6,601,764
_28380
AO356_28385: AO356_28385 - ABC transporter permease, at 6,601,776 to 6,602,657
_28385
AO356_28390: AO356_28390 - ABC transporter ATP-binding protein, at 6,602,725 to 6,603,507
_28390
AO356_28395: AO356_28395 - long-chain fatty acid--CoA ligase, at 6,603,521 to 6,604,681
_28395
Position (kb) 6602
6603
6604 Strain fitness (log2 ratio) -1
0
1 at 6601.821 kb on + strand at 6601.895 kb on - strand, within AO356_28385 at 6602.573 kb on - strand at 6602.606 kb on - strand at 6602.606 kb on - strand at 6602.606 kb on - strand at 6602.606 kb on - strand at 6602.606 kb on - strand at 6602.606 kb on - strand at 6602.668 kb on - strand at 6602.773 kb on + strand at 6603.029 kb on + strand, within AO356_28390 at 6603.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 6,601,821 + -0.1 6,601,895 - AO356_28385 0.13 -0.2 6,602,573 - -0.7 6,602,606 - +0.1 6,602,606 - +0.2 6,602,606 - +0.4 6,602,606 - -0.5 6,602,606 - -0.9 6,602,606 - -0.3 6,602,668 - +1.0 6,602,773 + -0.4 6,603,029 + AO356_28390 0.39 +0.4 6,603,466 - +0.0
Or see this region's nucleotide sequence