Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16385 and AO356_16390 are separated by 61 nucleotides AO356_16390 and AO356_16395 are separated by 103 nucleotides
AO356_16385: AO356_16385 - transcriptional regulator, at 3,701,533 to 3,702,447
_16385
AO356_16390: AO356_16390 - tRNA-Met, at 3,702,509 to 3,702,585
_16390
AO356_16395: AO356_16395 - chemotaxis protein, at 3,702,689 to 3,704,746
_16395
Position (kb)
3702
3703 Strain fitness (log2 ratio)
-1
0
1 at 3701.514 kb on - strand at 3701.531 kb on - strand at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.734 kb on + strand, within AO356_16385 at 3701.734 kb on + strand, within AO356_16385 at 3701.734 kb on + strand, within AO356_16385 at 3701.735 kb on - strand, within AO356_16385 at 3702.062 kb on + strand, within AO356_16385 at 3702.062 kb on + strand, within AO356_16385 at 3702.063 kb on - strand, within AO356_16385 at 3702.069 kb on + strand, within AO356_16385 at 3702.307 kb on + strand, within AO356_16385 at 3702.307 kb on + strand, within AO356_16385 at 3702.403 kb on + strand at 3702.404 kb on - strand at 3702.425 kb on + strand at 3702.425 kb on + strand at 3702.425 kb on + strand at 3702.426 kb on - strand at 3702.426 kb on - strand at 3702.426 kb on - strand at 3702.426 kb on - strand at 3702.426 kb on - strand at 3702.468 kb on + strand at 3702.482 kb on - strand at 3702.482 kb on - strand at 3702.641 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 3,701,514 - +0.3 3,701,531 - +1.2 3,701,703 + AO356_16385 0.19 +0.1 3,701,703 + AO356_16385 0.19 +0.4 3,701,703 + AO356_16385 0.19 +1.5 3,701,703 + AO356_16385 0.19 +0.2 3,701,703 + AO356_16385 0.19 +1.3 3,701,704 - AO356_16385 0.19 +0.7 3,701,704 - AO356_16385 0.19 +1.4 3,701,704 - AO356_16385 0.19 +0.2 3,701,704 - AO356_16385 0.19 -1.2 3,701,704 - AO356_16385 0.19 +0.9 3,701,734 + AO356_16385 0.22 +1.1 3,701,734 + AO356_16385 0.22 +0.3 3,701,734 + AO356_16385 0.22 -0.2 3,701,735 - AO356_16385 0.22 -0.5 3,702,062 + AO356_16385 0.58 +0.9 3,702,062 + AO356_16385 0.58 -0.3 3,702,063 - AO356_16385 0.58 -0.1 3,702,069 + AO356_16385 0.59 -0.4 3,702,307 + AO356_16385 0.85 +0.4 3,702,307 + AO356_16385 0.85 +0.2 3,702,403 + -0.6 3,702,404 - -0.2 3,702,425 + +0.8 3,702,425 + +0.3 3,702,425 + +0.0 3,702,426 - +1.0 3,702,426 - +0.6 3,702,426 - +0.1 3,702,426 - +0.3 3,702,426 - -0.1 3,702,468 + -0.4 3,702,482 - +0.2 3,702,482 - -0.3 3,702,641 - -0.8
Or see this region's nucleotide sequence