Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09365 and AO356_09370 are separated by 253 nucleotides AO356_09370 and AO356_09375 are separated by 33 nucleotides
AO356_09365: AO356_09365 - uroporphyrinogen decarboxylase, at 2,116,357 to 2,117,424
_09365
AO356_09370: AO356_09370 - glutamate synthase, at 2,117,678 to 2,119,096
_09370
AO356_09375: AO356_09375 - glutamate synthase, at 2,119,130 to 2,123,578
_09375
Position (kb)
2117
2118
2119
2120 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2117.500 kb on - strand at 2117.504 kb on - strand at 2117.534 kb on + strand at 2117.535 kb on - strand at 2117.535 kb on - strand at 2117.535 kb on - strand at 2117.691 kb on + strand at 2117.692 kb on - strand at 2117.692 kb on - strand at 2117.808 kb on + strand at 2117.808 kb on + strand at 2117.808 kb on + strand at 2117.809 kb on - strand at 2117.809 kb on - strand at 2117.809 kb on - strand at 2118.060 kb on + strand, within AO356_09370 at 2118.060 kb on + strand, within AO356_09370 at 2118.061 kb on - strand, within AO356_09370 at 2118.316 kb on - strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.357 kb on + strand, within AO356_09370 at 2118.358 kb on - strand, within AO356_09370 at 2118.358 kb on - strand, within AO356_09370 at 2118.358 kb on - strand, within AO356_09370 at 2118.358 kb on - strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.363 kb on + strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.364 kb on - strand, within AO356_09370 at 2118.393 kb on + strand, within AO356_09370 at 2118.394 kb on - strand, within AO356_09370 at 2118.394 kb on - strand, within AO356_09370 at 2118.591 kb on - strand, within AO356_09370 at 2118.714 kb on + strand, within AO356_09370 at 2118.714 kb on + strand, within AO356_09370 at 2118.714 kb on + strand, within AO356_09370 at 2118.714 kb on + strand, within AO356_09370 at 2118.714 kb on + strand, within AO356_09370 at 2118.714 kb on + strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2118.715 kb on - strand, within AO356_09370 at 2119.101 kb on - strand at 2119.101 kb on - strand at 2119.101 kb on - strand at 2119.101 kb on - strand at 2119.212 kb on + strand at 2119.212 kb on + strand at 2119.212 kb on + strand at 2119.213 kb on - strand at 2119.213 kb on - strand at 2119.269 kb on + strand at 2119.270 kb on - strand at 2119.270 kb on - strand at 2119.270 kb on - strand at 2119.302 kb on + strand at 2119.392 kb on + strand at 2119.393 kb on - strand at 2119.393 kb on - strand at 2119.393 kb on - strand at 2119.393 kb on - strand at 2119.426 kb on + strand at 2119.426 kb on + strand at 2119.426 kb on + strand at 2119.427 kb on - strand at 2119.427 kb on - strand at 2119.427 kb on - strand at 2119.428 kb on + strand at 2119.428 kb on + strand at 2119.439 kb on - strand at 2119.470 kb on + strand at 2119.470 kb on + strand at 2119.471 kb on - strand at 2119.471 kb on - strand at 2119.522 kb on + strand at 2119.522 kb on + strand at 2119.522 kb on + strand at 2119.584 kb on + strand, within AO356_09375 at 2119.626 kb on + strand, within AO356_09375 at 2119.626 kb on + strand, within AO356_09375 at 2119.626 kb on + strand, within AO356_09375 at 2119.626 kb on + strand, within AO356_09375 at 2119.627 kb on - strand, within AO356_09375 at 2119.627 kb on - strand, within AO356_09375 at 2119.627 kb on - strand, within AO356_09375 at 2119.687 kb on - strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.710 kb on + strand, within AO356_09375 at 2119.711 kb on - strand, within AO356_09375 at 2119.711 kb on - strand, within AO356_09375 at 2119.711 kb on - strand, within AO356_09375 at 2119.868 kb on - strand, within AO356_09375
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 2,117,500 - +0.6 2,117,504 - +0.4 2,117,534 + +0.2 2,117,535 - +0.3 2,117,535 - +0.7 2,117,535 - +0.2 2,117,691 + -1.8 2,117,692 - -1.8 2,117,692 - -3.0 2,117,808 + -1.5 2,117,808 + -2.1 2,117,808 + -2.3 2,117,809 - -1.6 2,117,809 - -1.3 2,117,809 - +0.7 2,118,060 + AO356_09370 0.27 -2.3 2,118,060 + AO356_09370 0.27 -1.2 2,118,061 - AO356_09370 0.27 -1.4 2,118,316 - AO356_09370 0.45 -3.5 2,118,357 + AO356_09370 0.48 -1.6 2,118,357 + AO356_09370 0.48 -1.0 2,118,357 + AO356_09370 0.48 -3.2 2,118,357 + AO356_09370 0.48 -1.3 2,118,357 + AO356_09370 0.48 -1.8 2,118,357 + AO356_09370 0.48 -2.8 2,118,357 + AO356_09370 0.48 +1.5 2,118,357 + AO356_09370 0.48 -1.8 2,118,357 + AO356_09370 0.48 -3.1 2,118,357 + AO356_09370 0.48 -2.6 2,118,358 - AO356_09370 0.48 -0.3 2,118,358 - AO356_09370 0.48 -2.3 2,118,358 - AO356_09370 0.48 +0.2 2,118,358 - AO356_09370 0.48 -1.9 2,118,363 + AO356_09370 0.48 -2.9 2,118,363 + AO356_09370 0.48 -2.1 2,118,363 + AO356_09370 0.48 -1.3 2,118,363 + AO356_09370 0.48 -1.7 2,118,363 + AO356_09370 0.48 -1.8 2,118,363 + AO356_09370 0.48 -3.7 2,118,363 + AO356_09370 0.48 -1.9 2,118,363 + AO356_09370 0.48 -1.1 2,118,363 + AO356_09370 0.48 -1.1 2,118,364 - AO356_09370 0.48 -3.2 2,118,364 - AO356_09370 0.48 -1.7 2,118,364 - AO356_09370 0.48 -1.9 2,118,364 - AO356_09370 0.48 -2.4 2,118,364 - AO356_09370 0.48 -2.4 2,118,364 - AO356_09370 0.48 -2.9 2,118,364 - AO356_09370 0.48 -2.0 2,118,364 - AO356_09370 0.48 -0.1 2,118,364 - AO356_09370 0.48 -3.4 2,118,364 - AO356_09370 0.48 -2.8 2,118,364 - AO356_09370 0.48 -3.3 2,118,393 + AO356_09370 0.50 -0.3 2,118,394 - AO356_09370 0.50 -1.7 2,118,394 - AO356_09370 0.50 -3.2 2,118,591 - AO356_09370 0.64 -2.8 2,118,714 + AO356_09370 0.73 -1.7 2,118,714 + AO356_09370 0.73 -2.5 2,118,714 + AO356_09370 0.73 -0.7 2,118,714 + AO356_09370 0.73 -2.8 2,118,714 + AO356_09370 0.73 -1.9 2,118,714 + AO356_09370 0.73 +0.2 2,118,715 - AO356_09370 0.73 -2.1 2,118,715 - AO356_09370 0.73 -2.2 2,118,715 - AO356_09370 0.73 -1.0 2,118,715 - AO356_09370 0.73 -1.5 2,118,715 - AO356_09370 0.73 -2.8 2,118,715 - AO356_09370 0.73 -2.0 2,118,715 - AO356_09370 0.73 -2.2 2,118,715 - AO356_09370 0.73 -2.0 2,119,101 - -2.9 2,119,101 - -3.5 2,119,101 - -1.0 2,119,101 - -2.5 2,119,212 + -2.6 2,119,212 + -2.1 2,119,212 + -3.8 2,119,213 - -2.2 2,119,213 - -2.4 2,119,269 + -1.0 2,119,270 - -3.1 2,119,270 - -1.2 2,119,270 - -1.0 2,119,302 + -2.4 2,119,392 + -2.2 2,119,393 - -1.4 2,119,393 - -1.6 2,119,393 - -1.0 2,119,393 - -1.5 2,119,426 + -3.1 2,119,426 + -1.6 2,119,426 + -1.7 2,119,427 - -3.4 2,119,427 - -0.7 2,119,427 - -2.8 2,119,428 + -2.2 2,119,428 + -1.0 2,119,439 - -2.1 2,119,470 + -2.9 2,119,470 + -0.8 2,119,471 - -2.3 2,119,471 - -2.3 2,119,522 + -0.6 2,119,522 + +0.4 2,119,522 + -2.3 2,119,584 + AO356_09375 0.10 -3.2 2,119,626 + AO356_09375 0.11 -1.4 2,119,626 + AO356_09375 0.11 -1.3 2,119,626 + AO356_09375 0.11 -1.6 2,119,626 + AO356_09375 0.11 -2.6 2,119,627 - AO356_09375 0.11 -2.1 2,119,627 - AO356_09375 0.11 -2.5 2,119,627 - AO356_09375 0.11 -3.0 2,119,687 - AO356_09375 0.13 -2.6 2,119,710 + AO356_09375 0.13 -1.8 2,119,710 + AO356_09375 0.13 -1.0 2,119,710 + AO356_09375 0.13 -2.9 2,119,710 + AO356_09375 0.13 -2.6 2,119,710 + AO356_09375 0.13 -2.1 2,119,710 + AO356_09375 0.13 -2.7 2,119,710 + AO356_09375 0.13 -2.1 2,119,711 - AO356_09375 0.13 -2.7 2,119,711 - AO356_09375 0.13 -1.9 2,119,711 - AO356_09375 0.13 -2.1 2,119,868 - AO356_09375 0.17 -2.2
Or see this region's nucleotide sequence