Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00395 and AO356_00400 overlap by 1 nucleotides AO356_00400 and AO356_00405 are separated by 26 nucleotides
AO356_00395: AO356_00395 - peptide ABC transporter permease, at 78,717 to 79,775
_00395
AO356_00400: AO356_00400 - ABC transporter permease, at 79,775 to 80,797
_00400
AO356_00405: AO356_00405 - microcin ABC transporter ATP-binding protein, at 80,824 to 82,404
_00405
Position (kb) 79
80
81 Strain fitness (log2 ratio) -1
0
1
2 at 78.951 kb on + strand, within AO356_00395 at 78.951 kb on + strand, within AO356_00395 at 78.951 kb on + strand, within AO356_00395 at 78.952 kb on - strand, within AO356_00395 at 79.002 kb on + strand, within AO356_00395 at 79.003 kb on - strand, within AO356_00395 at 79.003 kb on - strand, within AO356_00395 at 79.003 kb on - strand, within AO356_00395 at 79.117 kb on - strand, within AO356_00395 at 79.449 kb on + strand, within AO356_00395 at 79.449 kb on + strand, within AO356_00395 at 79.450 kb on - strand, within AO356_00395 at 79.497 kb on + strand, within AO356_00395 at 79.498 kb on - strand, within AO356_00395 at 79.629 kb on + strand, within AO356_00395 at 79.728 kb on + strand at 79.728 kb on + strand at 79.926 kb on - strand, within AO356_00400 at 79.940 kb on + strand, within AO356_00400 at 80.018 kb on + strand, within AO356_00400 at 80.018 kb on + strand, within AO356_00400 at 80.019 kb on - strand, within AO356_00400 at 80.019 kb on - strand, within AO356_00400 at 80.096 kb on + strand, within AO356_00400 at 80.097 kb on - strand, within AO356_00400 at 80.097 kb on - strand, within AO356_00400 at 80.097 kb on - strand, within AO356_00400 at 80.097 kb on - strand, within AO356_00400 at 80.345 kb on + strand, within AO356_00400 at 80.346 kb on - strand, within AO356_00400 at 80.346 kb on - strand, within AO356_00400 at 80.534 kb on - strand, within AO356_00400 at 81.695 kb on - strand, within AO356_00405 at 81.695 kb on - strand, within AO356_00405
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 78,951 + AO356_00395 0.22 +1.0 78,951 + AO356_00395 0.22 -0.9 78,951 + AO356_00395 0.22 -0.4 78,952 - AO356_00395 0.22 -0.1 79,002 + AO356_00395 0.27 +1.1 79,003 - AO356_00395 0.27 -0.4 79,003 - AO356_00395 0.27 +0.5 79,003 - AO356_00395 0.27 +0.8 79,117 - AO356_00395 0.38 +0.8 79,449 + AO356_00395 0.69 +0.8 79,449 + AO356_00395 0.69 +0.0 79,450 - AO356_00395 0.69 -0.3 79,497 + AO356_00395 0.74 +0.9 79,498 - AO356_00395 0.74 -1.0 79,629 + AO356_00395 0.86 +0.9 79,728 + +1.6 79,728 + +0.2 79,926 - AO356_00400 0.15 -0.5 79,940 + AO356_00400 0.16 +0.2 80,018 + AO356_00400 0.24 +0.4 80,018 + AO356_00400 0.24 +0.1 80,019 - AO356_00400 0.24 -0.7 80,019 - AO356_00400 0.24 +0.6 80,096 + AO356_00400 0.31 -0.0 80,097 - AO356_00400 0.31 -0.3 80,097 - AO356_00400 0.31 +1.6 80,097 - AO356_00400 0.31 +1.8 80,097 - AO356_00400 0.31 +0.8 80,345 + AO356_00400 0.56 +0.7 80,346 - AO356_00400 0.56 +0.4 80,346 - AO356_00400 0.56 +0.6 80,534 - AO356_00400 0.74 +0.9 81,695 - AO356_00405 0.55 +0.8 81,695 - AO356_00405 0.55 +0.7
Or see this region's nucleotide sequence