Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3989 and Dshi_3990 overlap by 14 nucleotides Dshi_3990 and Dshi_3991 are separated by 561 nucleotides Dshi_3991 and Dshi_3992 are separated by 1 nucleotides
Dshi_3989: Dshi_3989 - Relaxase/mobilization nuclease family protein (RefSeq), at 50,603 to 52,936
_3989
Dshi_3990: Dshi_3990 - hypothetical protein (RefSeq), at 52,923 to 53,516
_3990
Dshi_3991: Dshi_3991 - hypothetical protein (RefSeq), at 54,078 to 54,284
_3991
Dshi_3992: Dshi_3992 - no description, at 54,286 to 54,797
_3992
Position (kb) 52
53
54 Strain fitness (log2 ratio) -2
-1
0
1
2 at 51.939 kb on + strand, within Dshi_3989 at 52.155 kb on + strand, within Dshi_3989 at 52.245 kb on + strand, within Dshi_3989 at 52.515 kb on + strand, within Dshi_3989 at 52.569 kb on + strand, within Dshi_3989 at 52.711 kb on + strand at 52.866 kb on + strand at 52.957 kb on + strand at 53.100 kb on + strand, within Dshi_3990 at 53.101 kb on - strand, within Dshi_3990 at 53.117 kb on - strand, within Dshi_3990 at 53.205 kb on - strand, within Dshi_3990 at 53.365 kb on + strand, within Dshi_3990 at 53.454 kb on + strand, within Dshi_3990 at 53.462 kb on - strand at 53.502 kb on - strand at 53.519 kb on - strand at 53.698 kb on + strand at 53.715 kb on + strand at 53.715 kb on + strand at 53.723 kb on - strand at 53.723 kb on - strand at 53.806 kb on + strand at 53.806 kb on + strand at 53.813 kb on - strand at 54.012 kb on - strand at 54.309 kb on + strand at 54.460 kb on + strand, within Dshi_3992 at 54.469 kb on + strand, within Dshi_3992 at 54.474 kb on + strand, within Dshi_3992 at 54.516 kb on - strand, within Dshi_3992
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 51,939 + Dshi_3989 0.57 -0.2 52,155 + Dshi_3989 0.66 -0.6 52,245 + Dshi_3989 0.70 +1.3 52,515 + Dshi_3989 0.82 -2.6 52,569 + Dshi_3989 0.84 -0.6 52,711 + +1.8 52,866 + +0.0 52,957 + -0.1 53,100 + Dshi_3990 0.30 +0.8 53,101 - Dshi_3990 0.30 -0.4 53,117 - Dshi_3990 0.33 +0.2 53,205 - Dshi_3990 0.47 -0.7 53,365 + Dshi_3990 0.74 +0.2 53,454 + Dshi_3990 0.89 -1.6 53,462 - -0.3 53,502 - +0.3 53,519 - +0.6 53,698 + +1.1 53,715 + -1.2 53,715 + -0.6 53,723 - -0.1 53,723 - +0.2 53,806 + +0.4 53,806 + -1.0 53,813 - +1.0 54,012 - +0.1 54,309 + -0.5 54,460 + Dshi_3992 0.34 +0.6 54,469 + Dshi_3992 0.36 -1.3 54,474 + Dshi_3992 0.37 +0.3 54,516 - Dshi_3992 0.45 +2.2
Or see this region's nucleotide sequence