Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3527
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,706,148 | - | Dshi_3526 | 0.61 | +0.5 | |
3,706,185 | + | Dshi_3526 | 0.63 | +0.1 | |
3,706,190 | + | Dshi_3526 | 0.64 | +0.1 | |
3,706,192 | - | Dshi_3526 | 0.64 | +2.2 | |
3,706,195 | + | Dshi_3526 | 0.64 | -1.1 | |
3,706,266 | - | Dshi_3526 | 0.67 | -1.4 | |
3,706,414 | - | Dshi_3526 | 0.75 | -0.2 | |
3,706,488 | - | Dshi_3526 | 0.79 | +0.9 | |
3,706,508 | + | Dshi_3526 | 0.80 | +0.2 | |
3,706,511 | - | Dshi_3526 | 0.80 | -0.7 | |
3,706,571 | - | Dshi_3526 | 0.83 | -0.1 | |
3,706,663 | + | Dshi_3526 | 0.88 | -1.8 | |
3,706,896 | - | +0.2 | |||
3,707,780 | - | Dshi_3528 | 0.19 | +1.5 | |
3,707,800 | + | Dshi_3528 | 0.21 | +0.8 | |
3,707,812 | + | Dshi_3528 | 0.22 | +1.0 | |
3,708,023 | + | Dshi_3528 | 0.40 | +1.1 | |
3,708,067 | + | Dshi_3528 | 0.44 | -2.1 | |
3,708,072 | + | Dshi_3528 | 0.44 | +1.5 | |
3,708,236 | + | Dshi_3528 | 0.58 | -1.0 | |
3,708,549 | - | Dshi_3528 | 0.84 | +1.4 | |
3,708,549 | - | Dshi_3528 | 0.84 | +0.7 |
Or see this region's nucleotide sequence