Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3302
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,466,824 | + | +0.6 | |||
3,466,904 | + | -0.4 | |||
3,466,972 | + | -0.4 | |||
3,467,133 | + | Dshi_3302 | 0.11 | +2.2 | |
3,467,141 | - | Dshi_3302 | 0.13 | +0.8 | |
3,467,167 | - | Dshi_3302 | 0.22 | +0.5 | |
3,467,486 | + | -1.5 | |||
3,467,486 | + | -0.9 | |||
3,467,565 | - | Dshi_3303 | 0.14 | -0.4 | |
3,467,597 | - | Dshi_3303 | 0.17 | +1.1 | |
3,467,597 | - | Dshi_3303 | 0.17 | -0.4 | |
3,467,629 | - | Dshi_3303 | 0.20 | -0.1 | |
3,467,633 | + | Dshi_3303 | 0.21 | +0.5 | |
3,467,633 | + | Dshi_3303 | 0.21 | +1.3 | |
3,467,646 | - | Dshi_3303 | 0.22 | -0.3 | |
3,467,711 | + | Dshi_3303 | 0.28 | -1.4 | |
3,467,819 | - | Dshi_3303 | 0.38 | +0.2 | |
3,467,893 | + | Dshi_3303 | 0.44 | +0.3 | |
3,467,913 | + | Dshi_3303 | 0.46 | -1.3 | |
3,468,103 | - | Dshi_3303 | 0.63 | -0.0 | |
3,468,210 | - | Dshi_3303 | 0.73 | -0.2 | |
3,468,315 | + | Dshi_3303 | 0.82 | +0.6 | |
3,468,321 | + | +0.6 |
Or see this region's nucleotide sequence