Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3200 and Dshi_3201 are separated by 204 nucleotides Dshi_3201 and Dshi_3202 are separated by 74 nucleotides
Dshi_3200: Dshi_3200 - protein of unknown function DUF861 cupin_3 (RefSeq), at 3,364,993 to 3,365,862
_3200
Dshi_3201: Dshi_3201 - Endoribonuclease L-PSP (RefSeq), at 3,366,067 to 3,366,408
_3201
Dshi_3202: Dshi_3202 - uracil-xanthine permease (RefSeq), at 3,366,483 to 3,367,907
_3202
Position (kb)
3366
3367 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3365.442 kb on + strand, within Dshi_3200 at 3365.812 kb on - strand at 3365.814 kb on + strand at 3365.922 kb on + strand at 3365.927 kb on + strand at 3365.927 kb on + strand at 3366.038 kb on + strand at 3366.041 kb on - strand at 3366.046 kb on - strand at 3366.078 kb on + strand at 3366.153 kb on + strand, within Dshi_3201 at 3366.161 kb on - strand, within Dshi_3201 at 3366.266 kb on + strand, within Dshi_3201 at 3366.303 kb on - strand, within Dshi_3201 at 3366.348 kb on + strand, within Dshi_3201 at 3366.397 kb on + strand at 3366.405 kb on - strand at 3366.486 kb on + strand at 3366.509 kb on + strand at 3366.509 kb on + strand at 3366.509 kb on + strand at 3366.586 kb on - strand at 3366.620 kb on + strand at 3366.628 kb on - strand, within Dshi_3202 at 3366.694 kb on - strand, within Dshi_3202 at 3366.786 kb on - strand, within Dshi_3202 at 3366.842 kb on + strand, within Dshi_3202 at 3366.842 kb on + strand, within Dshi_3202 at 3366.847 kb on + strand, within Dshi_3202 at 3366.850 kb on - strand, within Dshi_3202 at 3366.860 kb on - strand, within Dshi_3202 at 3366.918 kb on + strand, within Dshi_3202 at 3366.965 kb on - strand, within Dshi_3202 at 3367.104 kb on - strand, within Dshi_3202 at 3367.173 kb on - strand, within Dshi_3202 at 3367.176 kb on + strand, within Dshi_3202 at 3367.203 kb on + strand, within Dshi_3202 at 3367.210 kb on - strand, within Dshi_3202 at 3367.212 kb on + strand, within Dshi_3202 at 3367.221 kb on - strand, within Dshi_3202 at 3367.238 kb on - strand, within Dshi_3202 at 3367.270 kb on - strand, within Dshi_3202 at 3367.306 kb on - strand, within Dshi_3202 at 3367.357 kb on + strand, within Dshi_3202 at 3367.359 kb on + strand, within Dshi_3202 at 3367.401 kb on + strand, within Dshi_3202
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,365,442 + Dshi_3200 0.52 -2.7 3,365,812 - -0.5 3,365,814 + -1.7 3,365,922 + -0.8 3,365,927 + +0.8 3,365,927 + +0.3 3,366,038 + -0.9 3,366,041 - +1.9 3,366,046 - -0.0 3,366,078 + +0.4 3,366,153 + Dshi_3201 0.25 +0.2 3,366,161 - Dshi_3201 0.27 +0.2 3,366,266 + Dshi_3201 0.58 +0.8 3,366,303 - Dshi_3201 0.69 -3.0 3,366,348 + Dshi_3201 0.82 -2.3 3,366,397 + +1.6 3,366,405 - +1.0 3,366,486 + +0.1 3,366,509 + +1.2 3,366,509 + -0.3 3,366,509 + -0.4 3,366,586 - -1.0 3,366,620 + +0.2 3,366,628 - Dshi_3202 0.10 +0.5 3,366,694 - Dshi_3202 0.15 -2.4 3,366,786 - Dshi_3202 0.21 -0.4 3,366,842 + Dshi_3202 0.25 +0.9 3,366,842 + Dshi_3202 0.25 -3.0 3,366,847 + Dshi_3202 0.26 -1.3 3,366,850 - Dshi_3202 0.26 -0.8 3,366,860 - Dshi_3202 0.26 -0.0 3,366,918 + Dshi_3202 0.31 -1.0 3,366,965 - Dshi_3202 0.34 +0.6 3,367,104 - Dshi_3202 0.44 +3.3 3,367,173 - Dshi_3202 0.48 -1.0 3,367,176 + Dshi_3202 0.49 +0.6 3,367,203 + Dshi_3202 0.51 -1.7 3,367,210 - Dshi_3202 0.51 +0.5 3,367,212 + Dshi_3202 0.51 -1.1 3,367,221 - Dshi_3202 0.52 +1.6 3,367,238 - Dshi_3202 0.53 -1.0 3,367,270 - Dshi_3202 0.55 -1.0 3,367,306 - Dshi_3202 0.58 +0.6 3,367,357 + Dshi_3202 0.61 +0.2 3,367,359 + Dshi_3202 0.61 -0.2 3,367,401 + Dshi_3202 0.64 -1.4
Or see this region's nucleotide sequence