Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3020 and Dshi_3021 are separated by 26 nucleotides Dshi_3021 and Dshi_3022 are separated by 182 nucleotides
Dshi_3020: Dshi_3020 - acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase (RefSeq), at 3,189,351 to 3,190,646
_3020
Dshi_3021: Dshi_3021 - aldehyde dehydrogenase (RefSeq), at 3,190,673 to 3,192,130
_3021
Dshi_3022: Dshi_3022 - PfkB domain protein (RefSeq), at 3,192,313 to 3,193,314
_3022
Position (kb)
3190
3191
3192
3193 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3189.686 kb on + strand, within Dshi_3020 at 3189.877 kb on - strand, within Dshi_3020 at 3189.877 kb on - strand, within Dshi_3020 at 3189.896 kb on + strand, within Dshi_3020 at 3190.021 kb on + strand, within Dshi_3020 at 3190.067 kb on + strand, within Dshi_3020 at 3190.112 kb on + strand, within Dshi_3020 at 3190.120 kb on + strand, within Dshi_3020 at 3190.178 kb on - strand, within Dshi_3020 at 3190.190 kb on - strand, within Dshi_3020 at 3190.207 kb on + strand, within Dshi_3020 at 3190.264 kb on + strand, within Dshi_3020 at 3190.291 kb on - strand, within Dshi_3020 at 3190.301 kb on - strand, within Dshi_3020 at 3190.322 kb on - strand, within Dshi_3020 at 3190.356 kb on + strand, within Dshi_3020 at 3190.646 kb on + strand at 3190.656 kb on + strand at 3190.672 kb on - strand at 3190.703 kb on - strand at 3190.763 kb on - strand at 3190.763 kb on - strand at 3190.820 kb on + strand, within Dshi_3021 at 3190.879 kb on + strand, within Dshi_3021 at 3190.954 kb on + strand, within Dshi_3021 at 3191.061 kb on - strand, within Dshi_3021 at 3191.093 kb on - strand, within Dshi_3021 at 3191.156 kb on - strand, within Dshi_3021 at 3191.183 kb on + strand, within Dshi_3021 at 3191.398 kb on + strand, within Dshi_3021 at 3191.414 kb on + strand, within Dshi_3021 at 3191.539 kb on - strand, within Dshi_3021 at 3191.539 kb on - strand, within Dshi_3021 at 3191.596 kb on + strand, within Dshi_3021 at 3191.608 kb on + strand, within Dshi_3021 at 3191.623 kb on + strand, within Dshi_3021 at 3191.627 kb on - strand, within Dshi_3021 at 3191.639 kb on - strand, within Dshi_3021 at 3191.744 kb on + strand, within Dshi_3021 at 3191.893 kb on + strand, within Dshi_3021 at 3191.934 kb on - strand, within Dshi_3021 at 3191.989 kb on - strand at 3192.000 kb on + strand at 3192.008 kb on - strand at 3192.028 kb on + strand at 3192.061 kb on - strand at 3192.157 kb on - strand at 3192.269 kb on - strand at 3192.311 kb on + strand at 3192.392 kb on - strand at 3192.629 kb on + strand, within Dshi_3022 at 3192.642 kb on - strand, within Dshi_3022 at 3192.642 kb on - strand, within Dshi_3022 at 3192.642 kb on - strand, within Dshi_3022 at 3192.749 kb on - strand, within Dshi_3022 at 3192.788 kb on + strand, within Dshi_3022 at 3192.979 kb on - strand, within Dshi_3022
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,189,686 + Dshi_3020 0.26 +0.6 3,189,877 - Dshi_3020 0.41 +1.0 3,189,877 - Dshi_3020 0.41 -0.4 3,189,896 + Dshi_3020 0.42 +0.5 3,190,021 + Dshi_3020 0.52 +0.6 3,190,067 + Dshi_3020 0.55 -2.4 3,190,112 + Dshi_3020 0.59 +2.1 3,190,120 + Dshi_3020 0.59 +0.3 3,190,178 - Dshi_3020 0.64 -1.5 3,190,190 - Dshi_3020 0.65 +0.1 3,190,207 + Dshi_3020 0.66 -0.1 3,190,264 + Dshi_3020 0.70 +0.1 3,190,291 - Dshi_3020 0.73 +0.5 3,190,301 - Dshi_3020 0.73 -0.1 3,190,322 - Dshi_3020 0.75 -0.2 3,190,356 + Dshi_3020 0.78 +0.1 3,190,646 + +1.2 3,190,656 + -2.1 3,190,672 - +0.7 3,190,703 - -0.1 3,190,763 - -1.0 3,190,763 - -0.7 3,190,820 + Dshi_3021 0.10 +0.8 3,190,879 + Dshi_3021 0.14 +0.6 3,190,954 + Dshi_3021 0.19 -2.1 3,191,061 - Dshi_3021 0.27 +0.1 3,191,093 - Dshi_3021 0.29 +0.6 3,191,156 - Dshi_3021 0.33 -0.9 3,191,183 + Dshi_3021 0.35 +0.4 3,191,398 + Dshi_3021 0.50 +0.9 3,191,414 + Dshi_3021 0.51 +0.0 3,191,539 - Dshi_3021 0.59 +0.7 3,191,539 - Dshi_3021 0.59 +0.9 3,191,596 + Dshi_3021 0.63 -0.0 3,191,608 + Dshi_3021 0.64 -1.7 3,191,623 + Dshi_3021 0.65 -0.2 3,191,627 - Dshi_3021 0.65 +0.4 3,191,639 - Dshi_3021 0.66 -1.8 3,191,744 + Dshi_3021 0.73 +0.7 3,191,893 + Dshi_3021 0.84 +1.3 3,191,934 - Dshi_3021 0.86 +1.2 3,191,989 - +0.1 3,192,000 + +1.1 3,192,008 - -0.0 3,192,028 + +0.6 3,192,061 - -0.3 3,192,157 - -1.5 3,192,269 - +1.5 3,192,311 + +0.3 3,192,392 - -0.3 3,192,629 + Dshi_3022 0.32 -1.8 3,192,642 - Dshi_3022 0.33 -1.4 3,192,642 - Dshi_3022 0.33 -3.3 3,192,642 - Dshi_3022 0.33 -0.6 3,192,749 - Dshi_3022 0.44 -2.3 3,192,788 + Dshi_3022 0.47 -0.9 3,192,979 - Dshi_3022 0.66 -0.8
Or see this region's nucleotide sequence