Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3017 and Dshi_3018 are separated by 159 nucleotides Dshi_3018 and Dshi_3019 are separated by 1 nucleotides Dshi_3019 and Dshi_3020 are separated by 126 nucleotides
Dshi_3017: Dshi_3017 - aldehyde dehydrogenase (RefSeq), at 3,185,825 to 3,188,167
_3017
Dshi_3018: Dshi_3018 - protein of unknown function DUF1523 (RefSeq), at 3,188,327 to 3,188,980
_3018
Dshi_3019: Dshi_3019 - hypothetical protein (RefSeq), at 3,188,982 to 3,189,224
_3019
Dshi_3020: Dshi_3020 - acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase (RefSeq), at 3,189,351 to 3,190,646
_3020
Position (kb)
3188
3189 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3187.411 kb on + strand, within Dshi_3017 at 3187.419 kb on - strand, within Dshi_3017 at 3187.424 kb on + strand, within Dshi_3017 at 3187.618 kb on - strand, within Dshi_3017 at 3187.636 kb on - strand, within Dshi_3017 at 3187.724 kb on + strand, within Dshi_3017 at 3187.732 kb on - strand, within Dshi_3017 at 3187.754 kb on + strand, within Dshi_3017 at 3187.907 kb on - strand, within Dshi_3017 at 3188.077 kb on - strand at 3188.190 kb on - strand at 3188.245 kb on - strand at 3188.477 kb on - strand, within Dshi_3018 at 3188.539 kb on - strand, within Dshi_3018 at 3188.558 kb on + strand, within Dshi_3018 at 3188.711 kb on + strand, within Dshi_3018 at 3188.719 kb on - strand, within Dshi_3018 at 3188.751 kb on + strand, within Dshi_3018 at 3188.871 kb on - strand, within Dshi_3018 at 3188.903 kb on - strand, within Dshi_3018 at 3188.930 kb on - strand at 3188.970 kb on + strand at 3188.988 kb on - strand at 3189.056 kb on - strand, within Dshi_3019 at 3189.127 kb on + strand, within Dshi_3019 at 3189.135 kb on - strand, within Dshi_3019 at 3189.200 kb on - strand at 3189.231 kb on - strand at 3189.249 kb on - strand at 3189.285 kb on - strand at 3189.423 kb on - strand at 3189.447 kb on - strand at 3189.465 kb on + strand at 3189.587 kb on + strand, within Dshi_3020 at 3189.686 kb on + strand, within Dshi_3020 at 3189.877 kb on - strand, within Dshi_3020 at 3189.877 kb on - strand, within Dshi_3020 at 3189.896 kb on + strand, within Dshi_3020
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,187,411 + Dshi_3017 0.68 -2.4 3,187,419 - Dshi_3017 0.68 -0.1 3,187,424 + Dshi_3017 0.68 -2.1 3,187,618 - Dshi_3017 0.77 +0.7 3,187,636 - Dshi_3017 0.77 -0.2 3,187,724 + Dshi_3017 0.81 -0.1 3,187,732 - Dshi_3017 0.81 -3.5 3,187,754 + Dshi_3017 0.82 +0.4 3,187,907 - Dshi_3017 0.89 -1.1 3,188,077 - -0.2 3,188,190 - -2.8 3,188,245 - +0.0 3,188,477 - Dshi_3018 0.23 -1.3 3,188,539 - Dshi_3018 0.32 +0.1 3,188,558 + Dshi_3018 0.35 -0.8 3,188,711 + Dshi_3018 0.59 +0.3 3,188,719 - Dshi_3018 0.60 -1.8 3,188,751 + Dshi_3018 0.65 +0.1 3,188,871 - Dshi_3018 0.83 -0.9 3,188,903 - Dshi_3018 0.88 +0.0 3,188,930 - +0.7 3,188,970 + -2.6 3,188,988 - -1.3 3,189,056 - Dshi_3019 0.30 -1.2 3,189,127 + Dshi_3019 0.60 -1.5 3,189,135 - Dshi_3019 0.63 -2.6 3,189,200 - -1.5 3,189,231 - +0.1 3,189,249 - +0.3 3,189,285 - +1.0 3,189,423 - +0.0 3,189,447 - -0.5 3,189,465 + +0.8 3,189,587 + Dshi_3020 0.18 -0.2 3,189,686 + Dshi_3020 0.26 +0.6 3,189,877 - Dshi_3020 0.41 +1.0 3,189,877 - Dshi_3020 0.41 -0.4 3,189,896 + Dshi_3020 0.42 +0.5
Or see this region's nucleotide sequence