Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3013 and Dshi_3014 are separated by 9 nucleotides Dshi_3014 and Dshi_3015 are separated by 89 nucleotides Dshi_3015 and Dshi_3016 are separated by 68 nucleotides
Dshi_3013: Dshi_3013 - protein of unknown function DUF606 (RefSeq), at 3,182,474 to 3,182,914
_3013
Dshi_3014: Dshi_3014 - Phytanoyl-CoA dioxygenase (RefSeq), at 3,182,924 to 3,183,751
_3014
Dshi_3015: Dshi_3015 - transcriptional regulator, AraC family (RefSeq), at 3,183,841 to 3,184,692
_3015
Dshi_3016: Dshi_3016 - deoxyribose-phosphate aldolase (RefSeq), at 3,184,761 to 3,185,780
_3016
Position (kb)
3183
3184
3185 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3182.855 kb on - strand, within Dshi_3013 at 3182.916 kb on - strand at 3182.946 kb on - strand at 3183.051 kb on - strand, within Dshi_3014 at 3183.053 kb on + strand, within Dshi_3014 at 3183.084 kb on - strand, within Dshi_3014 at 3183.092 kb on - strand, within Dshi_3014 at 3183.119 kb on + strand, within Dshi_3014 at 3183.192 kb on - strand, within Dshi_3014 at 3183.245 kb on + strand, within Dshi_3014 at 3183.263 kb on + strand, within Dshi_3014 at 3183.285 kb on - strand, within Dshi_3014 at 3183.348 kb on - strand, within Dshi_3014 at 3183.374 kb on + strand, within Dshi_3014 at 3183.528 kb on + strand, within Dshi_3014 at 3183.538 kb on + strand, within Dshi_3014 at 3183.633 kb on - strand, within Dshi_3014 at 3183.655 kb on - strand, within Dshi_3014 at 3183.668 kb on - strand, within Dshi_3014 at 3183.670 kb on + strand at 3183.719 kb on + strand at 3183.726 kb on + strand at 3183.844 kb on + strand at 3183.881 kb on - strand at 3183.940 kb on + strand, within Dshi_3015 at 3184.178 kb on + strand, within Dshi_3015 at 3184.249 kb on - strand, within Dshi_3015 at 3184.259 kb on - strand, within Dshi_3015 at 3184.323 kb on + strand, within Dshi_3015 at 3184.331 kb on - strand, within Dshi_3015 at 3184.343 kb on - strand, within Dshi_3015 at 3184.364 kb on + strand, within Dshi_3015 at 3184.364 kb on + strand, within Dshi_3015 at 3184.366 kb on + strand, within Dshi_3015 at 3184.374 kb on - strand, within Dshi_3015 at 3184.534 kb on + strand, within Dshi_3015 at 3184.551 kb on + strand, within Dshi_3015 at 3184.563 kb on - strand, within Dshi_3015 at 3184.696 kb on - strand at 3184.747 kb on + strand at 3184.771 kb on + strand at 3184.781 kb on - strand at 3184.836 kb on + strand at 3184.844 kb on - strand at 3184.893 kb on + strand, within Dshi_3016 at 3184.929 kb on - strand, within Dshi_3016 at 3185.031 kb on + strand, within Dshi_3016 at 3185.445 kb on + strand, within Dshi_3016 at 3185.485 kb on + strand, within Dshi_3016 at 3185.541 kb on + strand, within Dshi_3016 at 3185.587 kb on - strand, within Dshi_3016 at 3185.626 kb on + strand, within Dshi_3016
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,182,855 - Dshi_3013 0.86 +0.3 3,182,916 - +0.2 3,182,946 - -1.5 3,183,051 - Dshi_3014 0.15 -0.4 3,183,053 + Dshi_3014 0.16 -1.3 3,183,084 - Dshi_3014 0.19 -1.7 3,183,092 - Dshi_3014 0.20 -1.0 3,183,119 + Dshi_3014 0.24 -1.9 3,183,192 - Dshi_3014 0.32 -0.2 3,183,245 + Dshi_3014 0.39 -0.8 3,183,263 + Dshi_3014 0.41 +0.2 3,183,285 - Dshi_3014 0.44 +1.2 3,183,348 - Dshi_3014 0.51 -0.8 3,183,374 + Dshi_3014 0.54 -0.2 3,183,528 + Dshi_3014 0.73 +1.3 3,183,538 + Dshi_3014 0.74 +0.6 3,183,633 - Dshi_3014 0.86 +0.1 3,183,655 - Dshi_3014 0.88 +0.2 3,183,668 - Dshi_3014 0.90 -0.8 3,183,670 + +1.7 3,183,719 + -2.1 3,183,726 + -1.4 3,183,844 + -0.4 3,183,881 - -1.5 3,183,940 + Dshi_3015 0.12 +0.1 3,184,178 + Dshi_3015 0.40 -3.0 3,184,249 - Dshi_3015 0.48 -0.0 3,184,259 - Dshi_3015 0.49 -2.0 3,184,323 + Dshi_3015 0.57 -0.8 3,184,331 - Dshi_3015 0.58 +0.3 3,184,343 - Dshi_3015 0.59 -0.6 3,184,364 + Dshi_3015 0.61 -1.5 3,184,364 + Dshi_3015 0.61 +0.3 3,184,366 + Dshi_3015 0.62 +0.1 3,184,374 - Dshi_3015 0.63 -0.7 3,184,534 + Dshi_3015 0.81 +0.1 3,184,551 + Dshi_3015 0.83 +0.0 3,184,563 - Dshi_3015 0.85 +0.9 3,184,696 - -0.2 3,184,747 + +0.3 3,184,771 + -0.5 3,184,781 - +0.7 3,184,836 + +0.6 3,184,844 - -2.0 3,184,893 + Dshi_3016 0.13 -1.4 3,184,929 - Dshi_3016 0.16 +0.0 3,185,031 + Dshi_3016 0.26 +0.6 3,185,445 + Dshi_3016 0.67 -0.4 3,185,485 + Dshi_3016 0.71 -2.2 3,185,541 + Dshi_3016 0.76 -0.8 3,185,587 - Dshi_3016 0.81 -0.8 3,185,626 + Dshi_3016 0.85 -1.3
Or see this region's nucleotide sequence