Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2865 and Dshi_2866 are separated by 16 nucleotides Dshi_2866 and Dshi_2867 are separated by 11 nucleotides Dshi_2867 and Dshi_2868 are separated by 299 nucleotides Dshi_2868 and Dshi_2869 are separated by 9 nucleotides
Dshi_2865: Dshi_2865 - succinate dehydrogenase, flavoprotein subunit (RefSeq), at 3,021,696 to 3,023,498
_2865
Dshi_2866: Dshi_2866 - Succinate dehydrogenase hydrophobic membrane anchor (RefSeq), at 3,023,515 to 3,023,886
_2866
Dshi_2867: Dshi_2867 - Succinate dehydrogenase cytochrome b556 subunit (RefSeq), at 3,023,898 to 3,024,281
_2867
Dshi_2868: Dshi_2868 - cytochrome c class II (RefSeq), at 3,024,581 to 3,025,060
_2868
Dshi_2869: Dshi_2869 - Gluconate 2-dehydrogenase (acceptor) (RefSeq), at 3,025,070 to 3,025,948
_2869
Position (kb)
3023
3024
3025 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3024.467 kb on - strand at 3024.608 kb on + strand at 3024.659 kb on + strand, within Dshi_2868 at 3024.659 kb on + strand, within Dshi_2868 at 3024.729 kb on - strand, within Dshi_2868 at 3024.745 kb on + strand, within Dshi_2868 at 3024.993 kb on - strand, within Dshi_2868 at 3024.996 kb on + strand, within Dshi_2868 at 3025.006 kb on + strand, within Dshi_2868 at 3025.099 kb on + strand at 3025.149 kb on - strand at 3025.215 kb on - strand, within Dshi_2869 at 3025.270 kb on + strand, within Dshi_2869
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,024,467 - -0.4 3,024,608 + +1.0 3,024,659 + Dshi_2868 0.16 -1.0 3,024,659 + Dshi_2868 0.16 -2.5 3,024,729 - Dshi_2868 0.31 +0.4 3,024,745 + Dshi_2868 0.34 -0.7 3,024,993 - Dshi_2868 0.86 +0.0 3,024,996 + Dshi_2868 0.86 -1.3 3,025,006 + Dshi_2868 0.89 +0.8 3,025,099 + +2.1 3,025,149 - +0.4 3,025,215 - Dshi_2869 0.16 -3.9 3,025,270 + Dshi_2869 0.23 +0.7
Or see this region's nucleotide sequence