Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2679 and Dshi_2680 are separated by 410 nucleotides Dshi_2680 and Dshi_2681 are separated by 91 nucleotides Dshi_2681 and Dshi_2682 are separated by 13 nucleotides
Dshi_2679: Dshi_2679 - protein of unknown function DUF214 (RefSeq), at 2,836,269 to 2,838,797
_2679
Dshi_2680: Dshi_2680 - glycine dehydrogenase (RefSeq), at 2,839,208 to 2,842,072
_2680
Dshi_2681: Dshi_2681 - glycine cleavage system H protein (RefSeq), at 2,842,164 to 2,842,532
_2681
Dshi_2682: Dshi_2682 - glycine cleavage system T protein (RefSeq), at 2,842,546 to 2,843,631
_2682
Position (kb)
2839
2840
2841
2842
2843 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2838.252 kb on + strand, within Dshi_2679 at 2838.274 kb on + strand, within Dshi_2679 at 2838.295 kb on - strand, within Dshi_2679 at 2838.795 kb on - strand at 2839.071 kb on + strand at 2839.111 kb on + strand at 2839.213 kb on - strand at 2839.229 kb on + strand at 2839.312 kb on - strand at 2839.412 kb on - strand at 2839.771 kb on - strand, within Dshi_2680 at 2839.979 kb on - strand, within Dshi_2680 at 2840.327 kb on - strand, within Dshi_2680 at 2840.360 kb on - strand, within Dshi_2680 at 2840.531 kb on + strand, within Dshi_2680 at 2840.618 kb on - strand, within Dshi_2680 at 2840.799 kb on - strand, within Dshi_2680 at 2840.850 kb on - strand, within Dshi_2680 at 2840.990 kb on + strand, within Dshi_2680 at 2841.057 kb on + strand, within Dshi_2680 at 2841.079 kb on + strand, within Dshi_2680 at 2841.102 kb on + strand, within Dshi_2680 at 2841.171 kb on + strand, within Dshi_2680 at 2841.441 kb on - strand, within Dshi_2680 at 2841.456 kb on - strand, within Dshi_2680 at 2841.735 kb on - strand, within Dshi_2680 at 2841.744 kb on + strand at 2842.108 kb on - strand at 2842.161 kb on + strand at 2842.236 kb on - strand, within Dshi_2681 at 2842.293 kb on - strand, within Dshi_2681 at 2842.359 kb on - strand, within Dshi_2681 at 2842.847 kb on + strand, within Dshi_2682
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,838,252 + Dshi_2679 0.78 +0.8 2,838,274 + Dshi_2679 0.79 +0.9 2,838,295 - Dshi_2679 0.80 +1.2 2,838,795 - -0.9 2,839,071 + -0.8 2,839,111 + -2.1 2,839,213 - +0.0 2,839,229 + -0.4 2,839,312 - -2.8 2,839,412 - -1.2 2,839,771 - Dshi_2680 0.20 -0.2 2,839,979 - Dshi_2680 0.27 +0.3 2,840,327 - Dshi_2680 0.39 -1.8 2,840,360 - Dshi_2680 0.40 -2.1 2,840,531 + Dshi_2680 0.46 -1.0 2,840,618 - Dshi_2680 0.49 -0.7 2,840,799 - Dshi_2680 0.56 -0.7 2,840,850 - Dshi_2680 0.57 +0.3 2,840,990 + Dshi_2680 0.62 -1.6 2,841,057 + Dshi_2680 0.65 -3.5 2,841,079 + Dshi_2680 0.65 +0.1 2,841,102 + Dshi_2680 0.66 -2.2 2,841,171 + Dshi_2680 0.69 -1.0 2,841,441 - Dshi_2680 0.78 -0.7 2,841,456 - Dshi_2680 0.78 -1.3 2,841,735 - Dshi_2680 0.88 -1.7 2,841,744 + -0.2 2,842,108 - -1.8 2,842,161 + -2.4 2,842,236 - Dshi_2681 0.20 -2.0 2,842,293 - Dshi_2681 0.35 -2.4 2,842,359 - Dshi_2681 0.53 +0.3 2,842,847 + Dshi_2682 0.28 -2.4
Or see this region's nucleotide sequence