Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2579
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,743,741 | + | -0.5 | |||
2,743,855 | + | +0.2 | |||
2,744,681 | - | -0.2 | |||
2,744,810 | + | Dshi_2579 | 0.19 | -0.2 | |
2,744,825 | + | Dshi_2579 | 0.23 | +0.9 | |
2,744,833 | - | Dshi_2579 | 0.25 | +0.3 | |
2,744,833 | - | Dshi_2579 | 0.25 | +1.8 | |
2,744,833 | - | Dshi_2579 | 0.25 | -0.0 | |
2,744,942 | - | Dshi_2579 | 0.52 | +1.4 | |
2,744,942 | - | Dshi_2579 | 0.52 | +1.6 | |
2,744,945 | + | Dshi_2579 | 0.52 | -0.2 | |
2,744,985 | - | Dshi_2579 | 0.62 | +0.0 | |
2,745,115 | + | -0.5 | |||
2,745,123 | - | +1.6 | |||
2,745,123 | - | -0.5 | |||
2,745,177 | + | +0.4 | |||
2,745,308 | - | +0.4 | |||
2,745,335 | - | -0.8 | |||
2,745,384 | + | +0.2 | |||
2,745,414 | - | +0.8 | |||
2,745,515 | + | +0.4 | |||
2,745,605 | - | Dshi_2580 | 0.12 | -0.8 | |
2,745,712 | + | Dshi_2580 | 0.16 | -0.4 | |
2,745,746 | + | Dshi_2580 | 0.18 | +0.5 | |
2,745,810 | - | Dshi_2580 | 0.20 | +0.4 | |
2,745,810 | - | Dshi_2580 | 0.20 | -0.6 | |
2,745,810 | - | Dshi_2580 | 0.20 | -0.6 | |
2,745,810 | - | Dshi_2580 | 0.20 | -3.0 | |
2,745,810 | - | Dshi_2580 | 0.20 | +0.5 | |
2,745,823 | + | Dshi_2580 | 0.21 | +1.3 | |
2,746,071 | - | Dshi_2580 | 0.31 | +0.2 | |
2,746,075 | - | Dshi_2580 | 0.31 | -2.5 |
Or see this region's nucleotide sequence