Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2401
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,534,402 | - | +0.9 | |||
2,534,642 | - | Dshi_2400 | 0.39 | -0.0 | |
2,534,787 | - | Dshi_2400 | 0.60 | +2.9 | |
2,534,856 | - | Dshi_2400 | 0.70 | +0.3 | |
2,534,894 | - | Dshi_2400 | 0.75 | -0.5 | |
2,534,919 | + | Dshi_2400 | 0.79 | -0.0 | |
2,534,946 | - | Dshi_2400 | 0.83 | +0.3 | |
2,534,946 | - | Dshi_2400 | 0.83 | +0.2 | |
2,535,082 | - | +1.2 | |||
2,535,471 | - | +0.3 | |||
2,535,669 | + | Dshi_2401 | 0.17 | +0.9 | |
2,535,769 | + | Dshi_2401 | 0.20 | +0.9 | |
2,535,838 | + | Dshi_2401 | 0.23 | -2.3 | |
2,535,918 | - | Dshi_2401 | 0.26 | -0.1 | |
2,535,974 | + | Dshi_2401 | 0.28 | -1.8 | |
2,536,237 | + | Dshi_2401 | 0.39 | -0.2 | |
2,536,334 | + | Dshi_2401 | 0.42 | +0.8 | |
2,536,344 | + | Dshi_2401 | 0.43 | +1.0 | |
2,536,344 | + | Dshi_2401 | 0.43 | +0.3 | |
2,536,352 | - | Dshi_2401 | 0.43 | +0.4 | |
2,536,533 | + | Dshi_2401 | 0.50 | +0.8 | |
2,537,142 | - | Dshi_2401 | 0.73 | +1.6 | |
2,537,197 | + | Dshi_2401 | 0.76 | +1.9 | |
2,537,197 | + | Dshi_2401 | 0.76 | +0.4 | |
2,537,254 | + | Dshi_2401 | 0.78 | +0.8 | |
2,537,339 | + | Dshi_2401 | 0.81 | +0.8 | |
2,537,463 | + | Dshi_2401 | 0.86 | +1.3 | |
2,537,466 | - | Dshi_2401 | 0.86 | +0.7 | |
2,537,784 | + | -0.2 | |||
2,537,848 | - | +0.1 | |||
2,537,872 | - | -1.8 |
Or see this region's nucleotide sequence