Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2140 and Dshi_2141 are separated by 86 nucleotides Dshi_2141 and Dshi_2142 are separated by 109 nucleotides Dshi_2142 and Dshi_2143 are separated by 84 nucleotides
Dshi_2140: Dshi_2140 - sodium/hydrogen exchanger (RefSeq), at 2,269,849 to 2,271,162
_2140
Dshi_2141: Dshi_2141 - hypothetical protein (RefSeq), at 2,271,249 to 2,271,968
_2141
Dshi_2142: Dshi_2142 - ferric uptake regulator, Fur family (RefSeq), at 2,272,078 to 2,272,491
_2142
Dshi_2143: Dshi_2143 - Pirin domain protein (RefSeq), at 2,272,576 to 2,273,487
_2143
Position (kb)
2271
2272 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2270.390 kb on + strand, within Dshi_2140 at 2270.494 kb on + strand, within Dshi_2140 at 2270.494 kb on + strand, within Dshi_2140 at 2270.502 kb on - strand, within Dshi_2140 at 2270.510 kb on + strand, within Dshi_2140 at 2270.561 kb on + strand, within Dshi_2140 at 2270.582 kb on + strand, within Dshi_2140 at 2270.638 kb on + strand, within Dshi_2140 at 2270.646 kb on - strand, within Dshi_2140 at 2270.678 kb on - strand, within Dshi_2140 at 2271.068 kb on - strand at 2271.081 kb on + strand at 2271.163 kb on + strand at 2271.324 kb on + strand, within Dshi_2141 at 2271.502 kb on + strand, within Dshi_2141 at 2271.590 kb on - strand, within Dshi_2141 at 2271.766 kb on - strand, within Dshi_2141 at 2271.821 kb on + strand, within Dshi_2141 at 2271.821 kb on + strand, within Dshi_2141 at 2272.250 kb on + strand, within Dshi_2142 at 2272.252 kb on + strand, within Dshi_2142 at 2272.314 kb on + strand, within Dshi_2142 at 2272.509 kb on - strand at 2272.647 kb on - strand at 2272.728 kb on - strand, within Dshi_2143 at 2272.738 kb on + strand, within Dshi_2143 at 2272.792 kb on + strand, within Dshi_2143 at 2272.959 kb on + strand, within Dshi_2143
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,270,390 + Dshi_2140 0.41 -0.4 2,270,494 + Dshi_2140 0.49 -0.7 2,270,494 + Dshi_2140 0.49 +2.3 2,270,502 - Dshi_2140 0.50 +0.1 2,270,510 + Dshi_2140 0.50 -0.1 2,270,561 + Dshi_2140 0.54 -0.2 2,270,582 + Dshi_2140 0.56 +0.8 2,270,638 + Dshi_2140 0.60 -0.2 2,270,646 - Dshi_2140 0.61 +0.1 2,270,678 - Dshi_2140 0.63 +0.3 2,271,068 - -0.1 2,271,081 + -2.0 2,271,163 + +1.6 2,271,324 + Dshi_2141 0.10 +1.1 2,271,502 + Dshi_2141 0.35 +0.9 2,271,590 - Dshi_2141 0.47 +0.1 2,271,766 - Dshi_2141 0.72 +1.7 2,271,821 + Dshi_2141 0.79 +0.9 2,271,821 + Dshi_2141 0.79 +0.7 2,272,250 + Dshi_2142 0.42 +0.8 2,272,252 + Dshi_2142 0.42 +0.8 2,272,314 + Dshi_2142 0.57 -0.4 2,272,509 - +1.2 2,272,647 - +2.3 2,272,728 - Dshi_2143 0.17 +1.9 2,272,738 + Dshi_2143 0.18 -1.8 2,272,792 + Dshi_2143 0.24 -0.0 2,272,959 + Dshi_2143 0.42 +1.1
Or see this region's nucleotide sequence