Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2094 and Dshi_2095 are separated by 135 nucleotides Dshi_2095 and Dshi_2096 are separated by 165 nucleotides Dshi_2096 and Dshi_2097 are separated by 18 nucleotides Dshi_2097 and Dshi_2098 are separated by 119 nucleotides
Dshi_2094: Dshi_2094 - translation elongation factor P (RefSeq), at 2,217,877 to 2,218,518
_2094
Dshi_2095: Dshi_2095 - hypothetical protein (RefSeq), at 2,218,654 to 2,218,974
_2095
Dshi_2096: Dshi_2096 - cobyric acid synthase CobQ (RefSeq), at 2,219,140 to 2,220,600
_2096
Dshi_2097: Dshi_2097 - hypothetical protein (RefSeq), at 2,220,619 to 2,221,347
_2097
Dshi_2098: Dshi_2098 - type I secretion outer membrane protein, TolC family (RefSeq), at 2,221,467 to 2,222,837
_2098
Position (kb)
2219
2220
2221 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2218.346 kb on + strand, within Dshi_2094 at 2218.354 kb on - strand, within Dshi_2094 at 2218.490 kb on - strand at 2218.515 kb on + strand at 2218.973 kb on + strand at 2220.576 kb on + strand at 2220.576 kb on + strand at 2220.636 kb on + strand at 2220.670 kb on + strand at 2220.877 kb on - strand, within Dshi_2097 at 2220.877 kb on - strand, within Dshi_2097 at 2220.878 kb on + strand, within Dshi_2097 at 2221.026 kb on + strand, within Dshi_2097 at 2221.034 kb on - strand, within Dshi_2097 at 2221.036 kb on - strand, within Dshi_2097 at 2221.130 kb on + strand, within Dshi_2097
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,218,346 + Dshi_2094 0.73 -0.1 2,218,354 - Dshi_2094 0.74 -3.0 2,218,490 - -1.3 2,218,515 + +1.1 2,218,973 + -0.9 2,220,576 + -0.3 2,220,576 + +0.3 2,220,636 + +1.0 2,220,670 + +0.7 2,220,877 - Dshi_2097 0.35 -0.4 2,220,877 - Dshi_2097 0.35 -1.3 2,220,878 + Dshi_2097 0.36 +0.8 2,221,026 + Dshi_2097 0.56 -0.1 2,221,034 - Dshi_2097 0.57 -2.3 2,221,036 - Dshi_2097 0.57 -0.7 2,221,130 + Dshi_2097 0.70 +0.1
Or see this region's nucleotide sequence