Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2038 and Dshi_2039 are separated by 53 nucleotides Dshi_2039 and Dshi_2040 are separated by 46 nucleotides Dshi_2040 and Dshi_5005 overlap by 17 nucleotides
Dshi_2038: Dshi_2038 - Altronate dehydratase (RefSeq), at 2,157,081 to 2,158,262
_2038
Dshi_2039: Dshi_2039 - Malate/L-lactate dehydrogenase (RefSeq), at 2,158,316 to 2,159,335
_2039
Dshi_2040: Dshi_2040 - UspA domain protein (RefSeq), at 2,159,382 to 2,159,789
_2040
Dshi_5005: Dshi_5005 - hypothetical protein (RefSeq), at 2,159,773 to 2,160,468
_5005
Position (kb)
2158
2159
2160 Strain fitness (log2 ratio)
-1
0
1
2 at 2157.326 kb on - strand, within Dshi_2038 at 2157.358 kb on + strand, within Dshi_2038 at 2157.664 kb on - strand, within Dshi_2038 at 2157.818 kb on + strand, within Dshi_2038 at 2157.875 kb on + strand, within Dshi_2038 at 2157.887 kb on + strand, within Dshi_2038 at 2157.905 kb on + strand, within Dshi_2038 at 2157.905 kb on + strand, within Dshi_2038 at 2158.183 kb on + strand at 2158.332 kb on + strand at 2158.399 kb on + strand at 2158.417 kb on - strand at 2158.432 kb on + strand, within Dshi_2039 at 2158.440 kb on - strand, within Dshi_2039 at 2158.598 kb on + strand, within Dshi_2039 at 2158.661 kb on + strand, within Dshi_2039 at 2158.766 kb on + strand, within Dshi_2039 at 2158.817 kb on + strand, within Dshi_2039 at 2158.830 kb on - strand, within Dshi_2039 at 2158.864 kb on + strand, within Dshi_2039 at 2158.864 kb on + strand, within Dshi_2039 at 2159.180 kb on - strand, within Dshi_2039 at 2159.516 kb on - strand, within Dshi_2040 at 2159.552 kb on - strand, within Dshi_2040 at 2159.621 kb on + strand, within Dshi_2040 at 2159.624 kb on + strand, within Dshi_2040 at 2159.679 kb on + strand, within Dshi_2040 at 2159.679 kb on + strand, within Dshi_2040 at 2159.790 kb on + strand at 2160.099 kb on + strand, within Dshi_5005 at 2160.188 kb on + strand, within Dshi_5005 at 2160.285 kb on + strand, within Dshi_5005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,157,326 - Dshi_2038 0.21 +0.2 2,157,358 + Dshi_2038 0.23 -0.6 2,157,664 - Dshi_2038 0.49 -1.7 2,157,818 + Dshi_2038 0.62 -0.8 2,157,875 + Dshi_2038 0.67 -0.9 2,157,887 + Dshi_2038 0.68 +0.1 2,157,905 + Dshi_2038 0.70 +1.8 2,157,905 + Dshi_2038 0.70 +1.9 2,158,183 + -0.3 2,158,332 + +0.1 2,158,399 + +0.1 2,158,417 - -0.5 2,158,432 + Dshi_2039 0.11 +0.3 2,158,440 - Dshi_2039 0.12 -0.3 2,158,598 + Dshi_2039 0.28 +0.1 2,158,661 + Dshi_2039 0.34 +0.1 2,158,766 + Dshi_2039 0.44 +1.0 2,158,817 + Dshi_2039 0.49 +0.7 2,158,830 - Dshi_2039 0.50 +0.2 2,158,864 + Dshi_2039 0.54 +0.2 2,158,864 + Dshi_2039 0.54 +1.5 2,159,180 - Dshi_2039 0.85 +0.8 2,159,516 - Dshi_2040 0.33 +0.5 2,159,552 - Dshi_2040 0.42 -0.7 2,159,621 + Dshi_2040 0.59 -0.1 2,159,624 + Dshi_2040 0.59 -0.4 2,159,679 + Dshi_2040 0.73 -0.8 2,159,679 + Dshi_2040 0.73 -0.9 2,159,790 + -1.2 2,160,099 + Dshi_5005 0.47 -0.4 2,160,188 + Dshi_5005 0.60 -0.3 2,160,285 + Dshi_5005 0.74 +0.7
Or see this region's nucleotide sequence