Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2018
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,136,606 | + | Dshi_2017 | 0.39 | +0.9 | |
2,136,633 | - | Dshi_2017 | 0.42 | +1.1 | |
2,136,650 | - | Dshi_2017 | 0.43 | +1.1 | |
2,137,052 | + | Dshi_2017 | 0.83 | +0.3 | |
2,137,354 | + | +0.2 | |||
2,137,399 | + | Dshi_2018 | 0.11 | +0.3 | |
2,137,407 | - | Dshi_2018 | 0.14 | -1.0 | |
2,137,417 | - | Dshi_2018 | 0.18 | -0.3 | |
2,137,461 | - | Dshi_2018 | 0.35 | -0.5 | |
2,137,466 | - | Dshi_2018 | 0.37 | -0.7 | |
2,137,741 | - | -0.5 | |||
2,137,828 | + | +0.0 | |||
2,137,842 | - | +0.1 | |||
2,137,955 | - | Dshi_2019 | 0.15 | -2.1 | |
2,138,077 | + | Dshi_2019 | 0.23 | +0.5 | |
2,138,195 | - | Dshi_2019 | 0.30 | -0.7 | |
2,138,255 | + | Dshi_2019 | 0.34 | +1.0 | |
2,138,603 | - | Dshi_2019 | 0.55 | -2.0 |
Or see this region's nucleotide sequence