Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1740 and Dshi_1741 are separated by 35 nucleotides Dshi_1741 and Dshi_1742 are separated by 95 nucleotides Dshi_1742 and Dshi_1743 are separated by 3 nucleotides Dshi_1743 and Dshi_1744 are separated by 331 nucleotides
Dshi_1740: Dshi_1740 - glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq), at 1,807,000 to 1,808,001
_1740
Dshi_1741: Dshi_1741 - hypothetical protein (RefSeq), at 1,808,037 to 1,808,192
_1741
Dshi_1742: Dshi_1742 - glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq), at 1,808,288 to 1,809,310
_1742
Dshi_1743: Dshi_1743 - GCN5-related N-acetyltransferase (RefSeq), at 1,809,314 to 1,809,916
_1743
Dshi_1744: Dshi_1744 - pantetheine-phosphate adenylyltransferase (RefSeq), at 1,810,248 to 1,810,763
_1744
Position (kb)
1808
1809
1810 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1807.576 kb on + strand, within Dshi_1740 at 1807.595 kb on - strand, within Dshi_1740 at 1807.697 kb on + strand, within Dshi_1740 at 1807.731 kb on - strand, within Dshi_1740 at 1807.818 kb on - strand, within Dshi_1740 at 1807.818 kb on - strand, within Dshi_1740 at 1807.818 kb on - strand, within Dshi_1740 at 1807.913 kb on - strand at 1808.109 kb on + strand, within Dshi_1741 at 1809.540 kb on - strand, within Dshi_1743 at 1809.543 kb on + strand, within Dshi_1743 at 1809.622 kb on - strand, within Dshi_1743 at 1809.800 kb on - strand, within Dshi_1743 at 1809.948 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,807,576 + Dshi_1740 0.57 -0.5 1,807,595 - Dshi_1740 0.59 -0.9 1,807,697 + Dshi_1740 0.70 +0.3 1,807,731 - Dshi_1740 0.73 -0.2 1,807,818 - Dshi_1740 0.82 -0.1 1,807,818 - Dshi_1740 0.82 +1.1 1,807,818 - Dshi_1740 0.82 +0.0 1,807,913 - +2.1 1,808,109 + Dshi_1741 0.46 -2.0 1,809,540 - Dshi_1743 0.37 +0.5 1,809,543 + Dshi_1743 0.38 +0.3 1,809,622 - Dshi_1743 0.51 +0.7 1,809,800 - Dshi_1743 0.81 +0.5 1,809,948 + -1.2
Or see this region's nucleotide sequence