Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1677 and Dshi_1678 are separated by 62 nucleotides Dshi_1678 and Dshi_1679 are separated by 162 nucleotides Dshi_1679 and Dshi_1680 are separated by 135 nucleotides
Dshi_1677: Dshi_1677 - Methionine synthase (RefSeq), at 1,745,450 to 1,746,439
_1677
Dshi_1678: Dshi_1678 - hypothetical protein (RefSeq), at 1,746,502 to 1,747,206
_1678
Dshi_1679: Dshi_1679 - hypothetical protein (RefSeq), at 1,747,369 to 1,747,983
_1679
Dshi_1680: Dshi_1680 - ferredoxin (RefSeq), at 1,748,119 to 1,750,191
_1680
Position (kb)
1747
1748 Strain fitness (log2 ratio)
-2
-1
0
1 at 1746.449 kb on + strand at 1746.790 kb on - strand, within Dshi_1678 at 1746.798 kb on - strand, within Dshi_1678 at 1746.853 kb on + strand, within Dshi_1678 at 1746.859 kb on + strand, within Dshi_1678 at 1746.892 kb on - strand, within Dshi_1678 at 1746.953 kb on + strand, within Dshi_1678 at 1746.986 kb on + strand, within Dshi_1678 at 1746.994 kb on - strand, within Dshi_1678 at 1747.102 kb on - strand, within Dshi_1678 at 1747.133 kb on + strand, within Dshi_1678 at 1747.133 kb on + strand, within Dshi_1678 at 1747.138 kb on + strand at 1747.141 kb on - strand at 1747.141 kb on - strand at 1747.152 kb on + strand at 1747.170 kb on - strand at 1747.170 kb on - strand at 1747.227 kb on - strand at 1747.232 kb on + strand at 1747.237 kb on + strand at 1747.315 kb on + strand at 1747.333 kb on - strand at 1747.385 kb on + strand at 1747.403 kb on - strand at 1747.446 kb on - strand, within Dshi_1679 at 1747.447 kb on + strand, within Dshi_1679 at 1747.506 kb on - strand, within Dshi_1679 at 1747.522 kb on - strand, within Dshi_1679 at 1747.583 kb on + strand, within Dshi_1679 at 1747.583 kb on + strand, within Dshi_1679 at 1747.591 kb on - strand, within Dshi_1679 at 1747.608 kb on + strand, within Dshi_1679 at 1747.611 kb on - strand, within Dshi_1679 at 1747.680 kb on + strand, within Dshi_1679 at 1747.788 kb on + strand, within Dshi_1679 at 1747.798 kb on + strand, within Dshi_1679 at 1747.882 kb on + strand, within Dshi_1679 at 1747.885 kb on - strand, within Dshi_1679 at 1747.950 kb on + strand at 1747.961 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,746,449 + -1.1 1,746,790 - Dshi_1678 0.41 -1.3 1,746,798 - Dshi_1678 0.42 +0.9 1,746,853 + Dshi_1678 0.50 -0.3 1,746,859 + Dshi_1678 0.51 +0.1 1,746,892 - Dshi_1678 0.55 -0.2 1,746,953 + Dshi_1678 0.64 +0.5 1,746,986 + Dshi_1678 0.69 +1.1 1,746,994 - Dshi_1678 0.70 -0.6 1,747,102 - Dshi_1678 0.85 -0.3 1,747,133 + Dshi_1678 0.90 -0.6 1,747,133 + Dshi_1678 0.90 +0.6 1,747,138 + -0.2 1,747,141 - -0.6 1,747,141 - -0.4 1,747,152 + -0.8 1,747,170 - -0.9 1,747,170 - +0.7 1,747,227 - +1.3 1,747,232 + -0.4 1,747,237 + -0.7 1,747,315 + +0.5 1,747,333 - -0.4 1,747,385 + +1.3 1,747,403 - +0.1 1,747,446 - Dshi_1679 0.13 +0.3 1,747,447 + Dshi_1679 0.13 -0.7 1,747,506 - Dshi_1679 0.22 +0.6 1,747,522 - Dshi_1679 0.25 -0.2 1,747,583 + Dshi_1679 0.35 +1.2 1,747,583 + Dshi_1679 0.35 +0.5 1,747,591 - Dshi_1679 0.36 +0.4 1,747,608 + Dshi_1679 0.39 +0.7 1,747,611 - Dshi_1679 0.39 +0.4 1,747,680 + Dshi_1679 0.51 -0.2 1,747,788 + Dshi_1679 0.68 +1.0 1,747,798 + Dshi_1679 0.70 +0.0 1,747,882 + Dshi_1679 0.83 -0.2 1,747,885 - Dshi_1679 0.84 +0.5 1,747,950 + -2.3 1,747,961 + +0.6
Or see this region's nucleotide sequence