Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1270 and Dshi_1271 overlap by 4 nucleotides Dshi_1271 and Dshi_1272 are separated by 7 nucleotides
Dshi_1270: Dshi_1270 - oxidoreductase domain protein (RefSeq), at 1,319,800 to 1,320,918
_1270
Dshi_1271: Dshi_1271 - Xylose isomerase domain protein TIM barrel (RefSeq), at 1,320,915 to 1,321,811
_1271
Dshi_1272: Dshi_1272 - oxidoreductase domain protein (RefSeq), at 1,321,819 to 1,322,952
_1272
Position (kb)
1320
1321
1322 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1319.954 kb on - strand, within Dshi_1270 at 1319.959 kb on + strand, within Dshi_1270 at 1319.980 kb on + strand, within Dshi_1270 at 1320.185 kb on + strand, within Dshi_1270 at 1320.272 kb on - strand, within Dshi_1270 at 1320.508 kb on + strand, within Dshi_1270 at 1320.516 kb on - strand, within Dshi_1270 at 1320.652 kb on - strand, within Dshi_1270 at 1320.653 kb on - strand, within Dshi_1270 at 1320.682 kb on + strand, within Dshi_1270 at 1320.713 kb on + strand, within Dshi_1270 at 1320.721 kb on - strand, within Dshi_1270 at 1320.727 kb on - strand, within Dshi_1270 at 1320.832 kb on - strand at 1320.883 kb on - strand at 1321.044 kb on - strand, within Dshi_1271 at 1321.133 kb on - strand, within Dshi_1271 at 1321.219 kb on + strand, within Dshi_1271 at 1321.289 kb on + strand, within Dshi_1271 at 1321.305 kb on - strand, within Dshi_1271 at 1321.328 kb on + strand, within Dshi_1271 at 1321.351 kb on - strand, within Dshi_1271 at 1321.365 kb on - strand, within Dshi_1271 at 1321.375 kb on - strand, within Dshi_1271 at 1321.378 kb on + strand, within Dshi_1271 at 1321.440 kb on + strand, within Dshi_1271 at 1321.548 kb on - strand, within Dshi_1271 at 1321.714 kb on + strand, within Dshi_1271 at 1321.739 kb on - strand at 1321.750 kb on - strand at 1321.757 kb on + strand at 1321.766 kb on + strand at 1321.767 kb on + strand at 1321.778 kb on - strand at 1321.816 kb on + strand at 1321.833 kb on - strand at 1321.925 kb on - strand at 1321.966 kb on - strand, within Dshi_1272 at 1321.981 kb on + strand, within Dshi_1272 at 1322.102 kb on - strand, within Dshi_1272 at 1322.197 kb on + strand, within Dshi_1272 at 1322.205 kb on - strand, within Dshi_1272 at 1322.205 kb on - strand, within Dshi_1272 at 1322.304 kb on - strand, within Dshi_1272 at 1322.341 kb on + strand, within Dshi_1272 at 1322.423 kb on + strand, within Dshi_1272 at 1322.565 kb on + strand, within Dshi_1272 at 1322.630 kb on - strand, within Dshi_1272 at 1322.650 kb on - strand, within Dshi_1272 at 1322.662 kb on + strand, within Dshi_1272
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,319,954 - Dshi_1270 0.14 -0.4 1,319,959 + Dshi_1270 0.14 -1.5 1,319,980 + Dshi_1270 0.16 -1.0 1,320,185 + Dshi_1270 0.34 -2.7 1,320,272 - Dshi_1270 0.42 -0.0 1,320,508 + Dshi_1270 0.63 -1.5 1,320,516 - Dshi_1270 0.64 +0.4 1,320,652 - Dshi_1270 0.76 +0.1 1,320,653 - Dshi_1270 0.76 -0.9 1,320,682 + Dshi_1270 0.79 +0.6 1,320,713 + Dshi_1270 0.82 +0.9 1,320,721 - Dshi_1270 0.82 +0.2 1,320,727 - Dshi_1270 0.83 +0.2 1,320,832 - -0.4 1,320,883 - -1.0 1,321,044 - Dshi_1271 0.14 -1.3 1,321,133 - Dshi_1271 0.24 -1.5 1,321,219 + Dshi_1271 0.34 +0.6 1,321,289 + Dshi_1271 0.42 +0.7 1,321,305 - Dshi_1271 0.43 -0.5 1,321,328 + Dshi_1271 0.46 +1.8 1,321,351 - Dshi_1271 0.49 +0.7 1,321,365 - Dshi_1271 0.50 -3.0 1,321,375 - Dshi_1271 0.51 -1.4 1,321,378 + Dshi_1271 0.52 -2.3 1,321,440 + Dshi_1271 0.59 -0.3 1,321,548 - Dshi_1271 0.71 -0.4 1,321,714 + Dshi_1271 0.89 -0.6 1,321,739 - -0.8 1,321,750 - +1.6 1,321,757 + -0.1 1,321,766 + -0.2 1,321,767 + -1.3 1,321,778 - -0.3 1,321,816 + -0.9 1,321,833 - -1.1 1,321,925 - -1.0 1,321,966 - Dshi_1272 0.13 +0.3 1,321,981 + Dshi_1272 0.14 -2.3 1,322,102 - Dshi_1272 0.25 +0.3 1,322,197 + Dshi_1272 0.33 +1.2 1,322,205 - Dshi_1272 0.34 -1.8 1,322,205 - Dshi_1272 0.34 -1.6 1,322,304 - Dshi_1272 0.43 -0.1 1,322,341 + Dshi_1272 0.46 +0.0 1,322,423 + Dshi_1272 0.53 -0.0 1,322,565 + Dshi_1272 0.66 -0.1 1,322,630 - Dshi_1272 0.72 +0.0 1,322,650 - Dshi_1272 0.73 -1.6 1,322,662 + Dshi_1272 0.74 -0.1
Or see this region's nucleotide sequence