Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1268 and Dshi_1269 overlap by 4 nucleotides Dshi_1269 and Dshi_1270 are separated by 98 nucleotides
Dshi_1268: Dshi_1268 - PfkB domain protein (RefSeq), at 1,316,838 to 1,317,839
_1268
Dshi_1269: Dshi_1269 - thiamine pyrophosphate protein central region (RefSeq), at 1,317,836 to 1,319,701
_1269
Dshi_1270: Dshi_1270 - oxidoreductase domain protein (RefSeq), at 1,319,800 to 1,320,918
_1270
Position (kb)
1317
1318
1319
1320 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1316.836 kb on + strand at 1316.934 kb on - strand at 1317.079 kb on + strand, within Dshi_1268 at 1317.157 kb on + strand, within Dshi_1268 at 1317.180 kb on + strand, within Dshi_1268 at 1317.365 kb on + strand, within Dshi_1268 at 1317.371 kb on + strand, within Dshi_1268 at 1317.371 kb on + strand, within Dshi_1268 at 1317.397 kb on - strand, within Dshi_1268 at 1317.402 kb on + strand, within Dshi_1268 at 1317.448 kb on + strand, within Dshi_1268 at 1317.503 kb on - strand, within Dshi_1268 at 1317.513 kb on - strand, within Dshi_1268 at 1317.736 kb on - strand, within Dshi_1268 at 1317.911 kb on + strand at 1317.923 kb on + strand at 1317.923 kb on + strand at 1317.929 kb on - strand at 1318.019 kb on + strand at 1318.025 kb on - strand, within Dshi_1269 at 1318.025 kb on - strand, within Dshi_1269 at 1318.052 kb on - strand, within Dshi_1269 at 1318.141 kb on - strand, within Dshi_1269 at 1318.164 kb on + strand, within Dshi_1269 at 1318.235 kb on + strand, within Dshi_1269 at 1318.322 kb on - strand, within Dshi_1269 at 1318.333 kb on - strand, within Dshi_1269 at 1318.529 kb on - strand, within Dshi_1269 at 1318.741 kb on + strand, within Dshi_1269 at 1318.833 kb on - strand, within Dshi_1269 at 1318.925 kb on + strand, within Dshi_1269 at 1318.946 kb on + strand, within Dshi_1269 at 1319.063 kb on - strand, within Dshi_1269 at 1319.120 kb on + strand, within Dshi_1269 at 1319.123 kb on - strand, within Dshi_1269 at 1319.130 kb on + strand, within Dshi_1269 at 1319.148 kb on - strand, within Dshi_1269 at 1319.178 kb on - strand, within Dshi_1269 at 1319.178 kb on - strand, within Dshi_1269 at 1319.267 kb on + strand, within Dshi_1269 at 1319.330 kb on + strand, within Dshi_1269 at 1319.372 kb on - strand, within Dshi_1269 at 1319.378 kb on - strand, within Dshi_1269 at 1319.379 kb on - strand, within Dshi_1269 at 1319.417 kb on - strand, within Dshi_1269 at 1319.628 kb on + strand at 1319.631 kb on + strand at 1319.662 kb on - strand at 1319.734 kb on - strand at 1319.734 kb on - strand at 1319.807 kb on + strand at 1319.889 kb on - strand at 1319.954 kb on - strand, within Dshi_1270 at 1319.959 kb on + strand, within Dshi_1270 at 1319.980 kb on + strand, within Dshi_1270 at 1320.185 kb on + strand, within Dshi_1270 at 1320.272 kb on - strand, within Dshi_1270 at 1320.508 kb on + strand, within Dshi_1270 at 1320.516 kb on - strand, within Dshi_1270 at 1320.652 kb on - strand, within Dshi_1270 at 1320.653 kb on - strand, within Dshi_1270 at 1320.682 kb on + strand, within Dshi_1270
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,316,836 + -0.4 1,316,934 - +1.0 1,317,079 + Dshi_1268 0.24 +0.4 1,317,157 + Dshi_1268 0.32 +0.1 1,317,180 + Dshi_1268 0.34 -1.2 1,317,365 + Dshi_1268 0.53 -0.3 1,317,371 + Dshi_1268 0.53 +1.2 1,317,371 + Dshi_1268 0.53 +2.3 1,317,397 - Dshi_1268 0.56 -0.7 1,317,402 + Dshi_1268 0.56 -3.5 1,317,448 + Dshi_1268 0.61 +1.3 1,317,503 - Dshi_1268 0.66 +2.2 1,317,513 - Dshi_1268 0.67 -1.7 1,317,736 - Dshi_1268 0.90 +1.1 1,317,911 + -0.7 1,317,923 + +1.3 1,317,923 + +1.1 1,317,929 - -0.7 1,318,019 + +0.8 1,318,025 - Dshi_1269 0.10 -1.3 1,318,025 - Dshi_1269 0.10 +0.4 1,318,052 - Dshi_1269 0.12 -0.3 1,318,141 - Dshi_1269 0.16 +0.6 1,318,164 + Dshi_1269 0.18 +1.7 1,318,235 + Dshi_1269 0.21 -1.5 1,318,322 - Dshi_1269 0.26 -0.6 1,318,333 - Dshi_1269 0.27 +0.9 1,318,529 - Dshi_1269 0.37 -0.2 1,318,741 + Dshi_1269 0.48 +2.0 1,318,833 - Dshi_1269 0.53 -0.0 1,318,925 + Dshi_1269 0.58 +0.1 1,318,946 + Dshi_1269 0.59 -0.3 1,319,063 - Dshi_1269 0.66 +0.5 1,319,120 + Dshi_1269 0.69 +0.3 1,319,123 - Dshi_1269 0.69 +0.1 1,319,130 + Dshi_1269 0.69 +0.1 1,319,148 - Dshi_1269 0.70 +0.2 1,319,178 - Dshi_1269 0.72 +0.9 1,319,178 - Dshi_1269 0.72 +1.0 1,319,267 + Dshi_1269 0.77 -0.7 1,319,330 + Dshi_1269 0.80 -0.3 1,319,372 - Dshi_1269 0.82 -0.7 1,319,378 - Dshi_1269 0.83 -2.2 1,319,379 - Dshi_1269 0.83 +0.2 1,319,417 - Dshi_1269 0.85 +0.7 1,319,628 + -0.3 1,319,631 + -2.5 1,319,662 - +1.3 1,319,734 - -0.4 1,319,734 - +0.3 1,319,807 + +0.2 1,319,889 - -0.2 1,319,954 - Dshi_1270 0.14 -0.4 1,319,959 + Dshi_1270 0.14 -1.5 1,319,980 + Dshi_1270 0.16 -1.0 1,320,185 + Dshi_1270 0.34 -2.7 1,320,272 - Dshi_1270 0.42 -0.0 1,320,508 + Dshi_1270 0.63 -1.5 1,320,516 - Dshi_1270 0.64 +0.4 1,320,652 - Dshi_1270 0.76 +0.1 1,320,653 - Dshi_1270 0.76 -0.9 1,320,682 + Dshi_1270 0.79 +0.6
Or see this region's nucleotide sequence