Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1078 and Dshi_1079 are separated by 12 nucleotides Dshi_1079 and Dshi_1080 are separated by 73 nucleotides Dshi_1080 and Dshi_1081 are separated by 27 nucleotides
Dshi_1078: Dshi_1078 - Alcohol dehydrogenase zinc-binding domain protein (RefSeq), at 1,106,016 to 1,107,053
_1078
Dshi_1079: Dshi_1079 - phosphoribosylformylglycinamidine synthase I (RefSeq), at 1,107,066 to 1,107,737
_1079
Dshi_1080: Dshi_1080 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 1,107,811 to 1,109,568
_1080
Dshi_1081: Dshi_1081 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,109,596 to 1,110,921
_1081
Position (kb)
1107
1108
1109
1110 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1106.899 kb on + strand, within Dshi_1078 at 1107.006 kb on - strand at 1107.132 kb on - strand at 1107.229 kb on + strand, within Dshi_1079 at 1107.601 kb on - strand, within Dshi_1079 at 1108.082 kb on - strand, within Dshi_1080 at 1108.146 kb on - strand, within Dshi_1080 at 1108.467 kb on + strand, within Dshi_1080 at 1108.647 kb on - strand, within Dshi_1080 at 1108.697 kb on + strand, within Dshi_1080 at 1108.718 kb on + strand, within Dshi_1080 at 1108.782 kb on + strand, within Dshi_1080 at 1108.783 kb on - strand, within Dshi_1080 at 1108.844 kb on + strand, within Dshi_1080 at 1109.242 kb on - strand, within Dshi_1080 at 1109.297 kb on + strand, within Dshi_1080 at 1109.405 kb on - strand at 1109.535 kb on + strand at 1109.590 kb on + strand at 1109.598 kb on + strand at 1109.700 kb on - strand at 1109.777 kb on - strand, within Dshi_1081 at 1110.003 kb on + strand, within Dshi_1081 at 1110.098 kb on + strand, within Dshi_1081 at 1110.146 kb on + strand, within Dshi_1081 at 1110.198 kb on + strand, within Dshi_1081 at 1110.287 kb on + strand, within Dshi_1081 at 1110.307 kb on - strand, within Dshi_1081 at 1110.387 kb on + strand, within Dshi_1081
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,106,899 + Dshi_1078 0.85 -1.2 1,107,006 - -0.8 1,107,132 - -1.6 1,107,229 + Dshi_1079 0.24 -0.8 1,107,601 - Dshi_1079 0.80 -1.7 1,108,082 - Dshi_1080 0.15 -0.9 1,108,146 - Dshi_1080 0.19 -0.2 1,108,467 + Dshi_1080 0.37 -2.7 1,108,647 - Dshi_1080 0.48 -3.1 1,108,697 + Dshi_1080 0.50 -0.1 1,108,718 + Dshi_1080 0.52 +0.3 1,108,782 + Dshi_1080 0.55 -1.7 1,108,783 - Dshi_1080 0.55 -0.5 1,108,844 + Dshi_1080 0.59 -1.9 1,109,242 - Dshi_1080 0.81 +0.2 1,109,297 + Dshi_1080 0.85 -1.3 1,109,405 - +0.6 1,109,535 + +0.5 1,109,590 + +0.8 1,109,598 + +0.1 1,109,700 - -1.7 1,109,777 - Dshi_1081 0.14 -2.6 1,110,003 + Dshi_1081 0.31 +0.2 1,110,098 + Dshi_1081 0.38 -0.3 1,110,146 + Dshi_1081 0.41 +0.4 1,110,198 + Dshi_1081 0.45 -0.7 1,110,287 + Dshi_1081 0.52 -0.1 1,110,307 - Dshi_1081 0.54 +1.3 1,110,387 + Dshi_1081 0.60 +0.5
Or see this region's nucleotide sequence