Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0974 and Dshi_0975 are separated by 114 nucleotides Dshi_0975 and Dshi_0976 are separated by 217 nucleotides Dshi_0976 and Dshi_R0022 are separated by 197 nucleotides
Dshi_0974: Dshi_0974 - extracellular solute-binding protein family 1 (RefSeq), at 995,276 to 996,583
_0974
Dshi_0975: Dshi_0975 - transcriptional regulator, LacI family (RefSeq), at 996,698 to 997,732
_0975
Dshi_0976: Dshi_0976 - resolvase-like protein (RefSeq), at 997,950 to 998,168
_0976
Dshi_R0022: Dshi_R0022 - tRNA-Thr (RefSeq), at 998,366 to 998,440
_R0022
Position (kb)
996
997
998 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 995.820 kb on + strand, within Dshi_0974 at 995.828 kb on - strand, within Dshi_0974 at 995.851 kb on + strand, within Dshi_0974 at 995.952 kb on + strand, within Dshi_0974 at 995.970 kb on - strand, within Dshi_0974 at 995.977 kb on + strand, within Dshi_0974 at 995.977 kb on + strand, within Dshi_0974 at 996.201 kb on - strand, within Dshi_0974 at 996.201 kb on - strand, within Dshi_0974 at 996.206 kb on - strand, within Dshi_0974 at 996.226 kb on - strand, within Dshi_0974 at 996.255 kb on + strand, within Dshi_0974 at 996.294 kb on - strand, within Dshi_0974 at 996.438 kb on - strand, within Dshi_0974 at 996.550 kb on - strand at 996.550 kb on - strand at 996.625 kb on + strand at 996.777 kb on - strand at 996.836 kb on + strand, within Dshi_0975 at 996.844 kb on + strand, within Dshi_0975 at 996.872 kb on + strand, within Dshi_0975 at 996.910 kb on - strand, within Dshi_0975 at 997.080 kb on + strand, within Dshi_0975 at 997.114 kb on + strand, within Dshi_0975 at 997.231 kb on - strand, within Dshi_0975 at 997.431 kb on - strand, within Dshi_0975 at 997.521 kb on - strand, within Dshi_0975 at 997.597 kb on - strand, within Dshi_0975 at 997.805 kb on + strand at 997.846 kb on + strand at 997.847 kb on + strand at 997.855 kb on - strand at 997.857 kb on + strand at 997.865 kb on - strand at 997.865 kb on - strand at 997.875 kb on - strand at 997.960 kb on + strand at 997.995 kb on - strand, within Dshi_0976 at 998.019 kb on + strand, within Dshi_0976 at 998.089 kb on + strand, within Dshi_0976 at 998.231 kb on + strand at 998.231 kb on + strand at 998.256 kb on - strand at 998.282 kb on - strand at 998.305 kb on - strand at 998.534 kb on - strand at 998.535 kb on - strand at 998.535 kb on - strand at 998.535 kb on - strand at 998.546 kb on - strand at 998.590 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 995,820 + Dshi_0974 0.42 +0.2 995,828 - Dshi_0974 0.42 +1.0 995,851 + Dshi_0974 0.44 +0.9 995,952 + Dshi_0974 0.52 -2.9 995,970 - Dshi_0974 0.53 +0.0 995,977 + Dshi_0974 0.54 -2.0 995,977 + Dshi_0974 0.54 +1.3 996,201 - Dshi_0974 0.71 +2.8 996,201 - Dshi_0974 0.71 +0.6 996,206 - Dshi_0974 0.71 -0.7 996,226 - Dshi_0974 0.73 +0.3 996,255 + Dshi_0974 0.75 +1.4 996,294 - Dshi_0974 0.78 -2.5 996,438 - Dshi_0974 0.89 -0.2 996,550 - +0.4 996,550 - +1.5 996,625 + -0.5 996,777 - -0.9 996,836 + Dshi_0975 0.13 -1.5 996,844 + Dshi_0975 0.14 -0.9 996,872 + Dshi_0975 0.17 -1.5 996,910 - Dshi_0975 0.20 -1.7 997,080 + Dshi_0975 0.37 -1.5 997,114 + Dshi_0975 0.40 -2.2 997,231 - Dshi_0975 0.51 -3.7 997,431 - Dshi_0975 0.71 -2.9 997,521 - Dshi_0975 0.80 -1.9 997,597 - Dshi_0975 0.87 -1.2 997,805 + +0.4 997,846 + -0.6 997,847 + +0.8 997,855 - +0.3 997,857 + -0.7 997,865 - +0.1 997,865 - +0.4 997,875 - -1.5 997,960 + -0.1 997,995 - Dshi_0976 0.21 -0.6 998,019 + Dshi_0976 0.32 -1.6 998,089 + Dshi_0976 0.63 +0.9 998,231 + -0.3 998,231 + -2.2 998,256 - +0.8 998,282 - +0.6 998,305 - +0.5 998,534 - -2.6 998,535 - +0.6 998,535 - -0.0 998,535 - +0.2 998,546 - -0.8 998,590 - -0.7
Or see this region's nucleotide sequence