Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0638 and Dshi_0639 overlap by 4 nucleotides Dshi_0639 and Dshi_0640 are separated by 101 nucleotides Dshi_0640 and Dshi_0641 are separated by 4 nucleotides Dshi_0641 and Dshi_0642 are separated by 2 nucleotides
Dshi_0638: Dshi_0638 - ABC transporter related (RefSeq), at 637,586 to 638,542
_0638
Dshi_0639: Dshi_0639 - ABC-2 type transporter (RefSeq), at 638,539 to 639,300
_0639
Dshi_0640: Dshi_0640 - peptidase S49 (RefSeq), at 639,402 to 640,199
_0640
Dshi_0641: Dshi_0641 - hypothetical protein (RefSeq), at 640,204 to 640,374
_0641
Dshi_0642: Dshi_0642 - Na+/Ca+ antiporter, CaCA family (RefSeq), at 640,377 to 641,315
_0642
Position (kb) 639
640
641 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8 at 638.409 kb on - strand, within Dshi_0638 at 638.486 kb on - strand at 638.605 kb on - strand at 638.676 kb on + strand, within Dshi_0639 at 638.722 kb on + strand, within Dshi_0639 at 638.730 kb on - strand, within Dshi_0639 at 638.755 kb on - strand, within Dshi_0639 at 638.814 kb on + strand, within Dshi_0639 at 638.833 kb on + strand, within Dshi_0639 at 638.841 kb on - strand, within Dshi_0639 at 638.919 kb on - strand, within Dshi_0639 at 638.947 kb on + strand, within Dshi_0639 at 638.963 kb on + strand, within Dshi_0639 at 638.968 kb on + strand, within Dshi_0639 at 638.968 kb on + strand, within Dshi_0639 at 638.968 kb on + strand, within Dshi_0639 at 639.098 kb on - strand, within Dshi_0639 at 639.128 kb on + strand, within Dshi_0639 at 639.136 kb on + strand, within Dshi_0639 at 639.144 kb on - strand, within Dshi_0639 at 639.208 kb on + strand, within Dshi_0639 at 639.233 kb on + strand at 639.256 kb on - strand at 639.302 kb on - strand at 639.309 kb on + strand at 639.838 kb on + strand, within Dshi_0640 at 639.887 kb on + strand, within Dshi_0640 at 639.895 kb on - strand, within Dshi_0640 at 639.895 kb on - strand, within Dshi_0640 at 639.895 kb on - strand, within Dshi_0640 at 639.974 kb on + strand, within Dshi_0640 at 639.974 kb on + strand, within Dshi_0640 at 639.974 kb on + strand, within Dshi_0640 at 639.982 kb on - strand, within Dshi_0640 at 639.982 kb on - strand, within Dshi_0640 at 639.989 kb on + strand, within Dshi_0640 at 639.997 kb on - strand, within Dshi_0640 at 639.999 kb on + strand, within Dshi_0640 at 640.009 kb on + strand, within Dshi_0640 at 640.093 kb on + strand, within Dshi_0640 at 640.185 kb on + strand at 640.275 kb on + strand, within Dshi_0641 at 640.377 kb on - strand at 640.524 kb on - strand, within Dshi_0642 at 641.098 kb on + strand, within Dshi_0642
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 638,409 - Dshi_0638 0.86 -0.0 638,486 - +0.7 638,605 - -0.2 638,676 + Dshi_0639 0.18 +1.7 638,722 + Dshi_0639 0.24 +1.6 638,730 - Dshi_0639 0.25 -0.9 638,755 - Dshi_0639 0.28 +0.1 638,814 + Dshi_0639 0.36 +1.3 638,833 + Dshi_0639 0.39 -0.9 638,841 - Dshi_0639 0.40 -1.2 638,919 - Dshi_0639 0.50 -2.3 638,947 + Dshi_0639 0.54 -0.1 638,963 + Dshi_0639 0.56 -1.7 638,968 + Dshi_0639 0.56 -0.8 638,968 + Dshi_0639 0.56 +0.8 638,968 + Dshi_0639 0.56 +0.6 639,098 - Dshi_0639 0.73 +0.8 639,128 + Dshi_0639 0.77 -0.0 639,136 + Dshi_0639 0.78 +0.1 639,144 - Dshi_0639 0.79 +0.5 639,208 + Dshi_0639 0.88 -0.9 639,233 + -1.7 639,256 - +0.9 639,302 - -0.8 639,309 + -0.4 639,838 + Dshi_0640 0.55 +5.9 639,887 + Dshi_0640 0.61 +5.0 639,895 - Dshi_0640 0.62 +4.0 639,895 - Dshi_0640 0.62 +3.2 639,895 - Dshi_0640 0.62 +3.4 639,974 + Dshi_0640 0.72 +5.9 639,974 + Dshi_0640 0.72 +5.8 639,974 + Dshi_0640 0.72 +5.7 639,982 - Dshi_0640 0.73 +5.0 639,982 - Dshi_0640 0.73 +4.6 639,989 + Dshi_0640 0.74 +7.8 639,997 - Dshi_0640 0.75 +3.6 639,999 + Dshi_0640 0.75 +5.8 640,009 + Dshi_0640 0.76 +5.0 640,093 + Dshi_0640 0.87 +5.6 640,185 + +2.9 640,275 + Dshi_0641 0.42 +5.8 640,377 - +5.2 640,524 - Dshi_0642 0.16 +5.3 641,098 + Dshi_0642 0.77 +5.6
Or see this region's nucleotide sequence