Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0194 and Dshi_0195 are separated by 37 nucleotides Dshi_0195 and Dshi_0196 are separated by 25 nucleotides Dshi_0196 and Dshi_0197 overlap by 4 nucleotides Dshi_0197 and Dshi_0198 are separated by 139 nucleotides
Dshi_0194: Dshi_0194 - (p)ppGpp synthetase I, SpoT/RelA (RefSeq), at 193,417 to 195,561
_0194
Dshi_0195: Dshi_0195 - hypothetical protein (RefSeq), at 195,599 to 196,255
_0195
Dshi_0196: Dshi_0196 - pyridoxal phosphate biosynthetic protein PdxJ (RefSeq), at 196,281 to 197,045
_0196
Dshi_0197: Dshi_0197 - hypothetical protein (RefSeq), at 197,042 to 197,704
_0197
Dshi_0198: Dshi_0198 - holo-acyl-carrier-protein synthase (RefSeq), at 197,844 to 198,263
_0198
Position (kb) 196
197
198 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 195.290 kb on + strand, within Dshi_0194 at 195.316 kb on + strand, within Dshi_0194 at 195.454 kb on + strand at 195.460 kb on - strand at 195.475 kb on - strand at 195.475 kb on - strand at 195.549 kb on - strand at 195.554 kb on + strand at 195.562 kb on - strand at 195.666 kb on - strand, within Dshi_0195 at 195.666 kb on - strand, within Dshi_0195 at 195.678 kb on + strand, within Dshi_0195 at 195.887 kb on - strand, within Dshi_0195 at 195.887 kb on - strand, within Dshi_0195 at 195.904 kb on + strand, within Dshi_0195 at 195.912 kb on - strand, within Dshi_0195 at 195.957 kb on + strand, within Dshi_0195 at 195.963 kb on - strand, within Dshi_0195 at 195.972 kb on + strand, within Dshi_0195 at 195.990 kb on - strand, within Dshi_0195 at 195.995 kb on + strand, within Dshi_0195 at 196.072 kb on + strand, within Dshi_0195 at 196.080 kb on - strand, within Dshi_0195 at 196.080 kb on - strand, within Dshi_0195 at 196.080 kb on - strand, within Dshi_0195 at 196.142 kb on - strand, within Dshi_0195 at 196.171 kb on + strand, within Dshi_0195 at 196.295 kb on - strand at 197.024 kb on + strand at 197.039 kb on + strand at 197.057 kb on - strand at 197.092 kb on - strand at 197.578 kb on - strand, within Dshi_0197 at 197.578 kb on - strand, within Dshi_0197 at 197.588 kb on + strand, within Dshi_0197 at 197.595 kb on + strand, within Dshi_0197 at 197.694 kb on - strand at 197.716 kb on + strand at 197.821 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 195,290 + Dshi_0194 0.87 +0.9 195,316 + Dshi_0194 0.89 +1.4 195,454 + +1.1 195,460 - +1.7 195,475 - +0.2 195,475 - -0.3 195,549 - -0.6 195,554 + +2.5 195,562 - +1.4 195,666 - Dshi_0195 0.10 +3.5 195,666 - Dshi_0195 0.10 +1.6 195,678 + Dshi_0195 0.12 +2.2 195,887 - Dshi_0195 0.44 +1.3 195,887 - Dshi_0195 0.44 +1.4 195,904 + Dshi_0195 0.46 +1.8 195,912 - Dshi_0195 0.48 +1.9 195,957 + Dshi_0195 0.54 +0.8 195,963 - Dshi_0195 0.55 +0.9 195,972 + Dshi_0195 0.57 +2.4 195,990 - Dshi_0195 0.60 +1.5 195,995 + Dshi_0195 0.60 +1.5 196,072 + Dshi_0195 0.72 +1.6 196,080 - Dshi_0195 0.73 +1.0 196,080 - Dshi_0195 0.73 +1.6 196,080 - Dshi_0195 0.73 +2.3 196,142 - Dshi_0195 0.83 +1.6 196,171 + Dshi_0195 0.87 -0.9 196,295 - -2.8 197,024 + +0.5 197,039 + +0.5 197,057 - +0.8 197,092 - -0.9 197,578 - Dshi_0197 0.81 -0.1 197,578 - Dshi_0197 0.81 +0.0 197,588 + Dshi_0197 0.82 -2.7 197,595 + Dshi_0197 0.83 -1.4 197,694 - -1.7 197,716 + +0.3 197,821 - -0.2
Or see this region's nucleotide sequence