Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0145 and Dshi_0146 are separated by 8 nucleotides Dshi_0146 and Dshi_0147 are separated by 285 nucleotides Dshi_0147 and Dshi_0148 are separated by 30 nucleotides
Dshi_0145: Dshi_0145 - Aspartate transaminase (RefSeq), at 145,044 to 146,222
_0145
Dshi_0146: Dshi_0146 - Rhodanese domain protein (RefSeq), at 146,231 to 147,106
_0146
Dshi_0147: Dshi_0147 - SsrA-binding protein (RefSeq), at 147,392 to 147,874
_0147
Dshi_0148: Dshi_0148 - GCN5-related N-acetyltransferase (RefSeq), at 147,905 to 148,354
_0148
Position (kb) 146
147
148 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 145.258 kb on + strand, within Dshi_0145 at 145.260 kb on - strand, within Dshi_0145 at 145.316 kb on + strand, within Dshi_0145 at 145.364 kb on + strand at 145.412 kb on - strand, within Dshi_0145 at 145.522 kb on + strand, within Dshi_0145 at 145.726 kb on + strand, within Dshi_0145 at 146.384 kb on - strand, within Dshi_0146 at 146.509 kb on - strand, within Dshi_0146 at 146.531 kb on - strand, within Dshi_0146 at 146.600 kb on - strand, within Dshi_0146 at 146.625 kb on + strand, within Dshi_0146 at 146.725 kb on - strand, within Dshi_0146 at 146.783 kb on - strand, within Dshi_0146 at 147.023 kb on + strand at 147.398 kb on - strand at 147.904 kb on - strand at 147.995 kb on + strand, within Dshi_0148 at 148.081 kb on + strand, within Dshi_0148
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 145,258 + Dshi_0145 0.18 +0.0 145,260 - Dshi_0145 0.18 -1.3 145,316 + Dshi_0145 0.23 +0.5 145,364 + +0.3 145,412 - Dshi_0145 0.31 -1.2 145,522 + Dshi_0145 0.41 -0.5 145,726 + Dshi_0145 0.58 -0.5 146,384 - Dshi_0146 0.17 -2.0 146,509 - Dshi_0146 0.32 +0.9 146,531 - Dshi_0146 0.34 +0.0 146,600 - Dshi_0146 0.42 -3.0 146,625 + Dshi_0146 0.45 -0.6 146,725 - Dshi_0146 0.56 -1.7 146,783 - Dshi_0146 0.63 -0.1 147,023 + +0.5 147,398 - +0.3 147,904 - -0.0 147,995 + Dshi_0148 0.20 +2.4 148,081 + Dshi_0148 0.39 -0.9
Or see this region's nucleotide sequence