Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30435

Experiment: Temperature shift 30_to_4; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 30_to_4; with MOPS
1,329,125	+		PFLU_RS05950	0.41	-1.1
1,329,125	+		PFLU_RS05950	0.41	-0.7
1,329,125	+		PFLU_RS05950	0.41	-0.9
1,329,125	+		PFLU_RS05950	0.41	+0.1
1,329,126	-		PFLU_RS05950	0.42	-0.0
1,329,186	-		PFLU_RS05950	0.46	-1.4
1,329,186	-		PFLU_RS05950	0.46	-0.8
1,329,191	+		PFLU_RS05950	0.46	-0.1
1,329,191	+		PFLU_RS05950	0.46	+0.9
1,329,191	+		PFLU_RS05950	0.46	-0.6
1,329,191	+		PFLU_RS05950	0.46	+0.6
1,329,191	+		PFLU_RS05950	0.46	-0.7
1,329,191	+		PFLU_RS05950	0.46	-0.3
1,329,192	-		PFLU_RS05950	0.46	-0.8
1,329,287	+		PFLU_RS05950	0.54	-1.7
1,329,287	+		PFLU_RS05950	0.54	+0.4
1,329,287	+		PFLU_RS05950	0.54	+0.8
1,329,287	+		PFLU_RS05950	0.54	-0.5
1,329,287	+		PFLU_RS05950	0.54	+0.3
1,329,287	+		PFLU_RS05950	0.54	-0.1
1,329,287	+		PFLU_RS05950	0.54	-0.1
1,329,287	+		PFLU_RS05950	0.54	+0.7
1,329,287	+		PFLU_RS05950	0.54	+0.3
1,329,288	-		PFLU_RS05950	0.54	+2.7
1,329,288	-		PFLU_RS05950	0.54	-2.3
1,329,288	-		PFLU_RS05950	0.54	-0.9
1,329,288	-		PFLU_RS05950	0.54	+1.0
1,329,306	-		PFLU_RS05950	0.55	-1.8
1,329,473	+		PFLU_RS05950	0.67	-1.7
1,329,473	+		PFLU_RS05950	0.67	-2.4
1,329,473	+		PFLU_RS05950	0.67	-0.1
1,329,473	+		PFLU_RS05950	0.67	+2.2
1,329,474	-		PFLU_RS05950	0.67	+1.5
1,329,474	-		PFLU_RS05950	0.67	-0.2
1,329,474	-		PFLU_RS05950	0.67	+2.0
1,329,474	-		PFLU_RS05950	0.67	-0.5
1,329,474	-		PFLU_RS05950	0.67	-1.5
1,329,474	-		PFLU_RS05950	0.67	+0.3
1,329,479	+		PFLU_RS05950	0.68	+0.4
1,329,479	+		PFLU_RS05950	0.68	-0.7
1,329,479	+		PFLU_RS05950	0.68	+0.6
1,329,479	+		PFLU_RS05950	0.68	+0.2
1,329,480	-		PFLU_RS05950	0.68	-0.6
1,329,480	-		PFLU_RS05950	0.68	-0.1
1,329,480	-		PFLU_RS05950	0.68	-1.6
1,329,556	+		PFLU_RS05950	0.74	-0.5
1,329,556	+		PFLU_RS05950	0.74	-1.1
1,329,557	-		PFLU_RS05950	0.74	-0.6
1,329,557	-		PFLU_RS05950	0.74	-0.9
1,329,557	-		PFLU_RS05950	0.74	+1.5
1,329,557	-		PFLU_RS05950	0.74	-0.3
1,329,557	-		PFLU_RS05950	0.74	+2.5
1,329,587	+		PFLU_RS05950	0.76	-1.2
1,329,588	-		PFLU_RS05950	0.76	+0.5
1,329,588	-		PFLU_RS05950	0.76	-0.8
1,329,779	+				-0.3
1,329,779	+				+1.6
1,329,779	+				-0.4
1,329,779	+				-1.5
1,329,779	+				-0.5
1,329,780	-				-1.2
1,329,780	-				+0.1
1,329,797	+				-0.6
1,329,797	+				+1.1
1,329,797	+				-2.1
1,329,797	+				-1.7
1,329,797	+				-1.5
1,329,797	+				-0.2
1,329,798	-				+0.3
1,329,798	-				+0.3
1,329,798	-				+2.2
1,329,798	-				-0.4
1,329,807	+				+0.5
1,329,807	+				+0.9
1,329,807	+				+0.1
1,329,808	-				+0.9
1,329,808	-				+0.1
1,329,913	+				+1.5
1,329,914	-				+0.1
1,329,922	+				+0.5
1,330,032	+				-0.3
1,330,032	+				+0.5
1,330,032	+				+1.5
1,330,033	-				-0.5
1,330,033	-				+0.0
1,330,033	-				+0.5
1,330,033	-				-0.8
1,330,033	-				+0.1
1,330,033	-				+0.9
1,330,033	-				+0.6
1,330,033	-				+0.6
1,330,033	-				+0.0
1,330,092	+				+0.9
1,330,132	+		PFLU_RS30435	0.30	-0.2
1,330,132	+		PFLU_RS30435	0.30	+0.7
1,330,132	+		PFLU_RS30435	0.30	-0.7
1,330,132	+		PFLU_RS30435	0.30	+0.0
1,330,133	-		PFLU_RS30435	0.31	+0.8
1,330,133	-		PFLU_RS30435	0.31	-0.0
1,330,133	-		PFLU_RS30435	0.31	-1.5
1,330,133	-		PFLU_RS30435	0.31	-0.1
1,330,133	-		PFLU_RS30435	0.31	-0.5
1,330,142	+		PFLU_RS30435	0.38	+1.9
1,330,142	+		PFLU_RS30435	0.38	-0.7
1,330,142	+		PFLU_RS30435	0.38	-0.3
1,330,142	+		PFLU_RS30435	0.38	-0.1
1,330,142	+		PFLU_RS30435	0.38	-1.2
1,330,143	-		PFLU_RS30435	0.39	-0.2
1,330,143	-		PFLU_RS30435	0.39	+0.9
1,330,143	-		PFLU_RS30435	0.39	+1.5
1,330,143	-		PFLU_RS30435	0.39	-1.6
1,330,143	-		PFLU_RS30435	0.39	-0.4
1,330,143	-		PFLU_RS30435	0.39	-0.5
1,330,143	-		PFLU_RS30435	0.39	+1.0
1,330,143	-		PFLU_RS30435	0.39	+0.3
1,330,143	-		PFLU_RS30435	0.39	-0.6
1,330,143	-		PFLU_RS30435	0.39	-0.5
1,330,143	-		PFLU_RS30435	0.39	+1.6
1,330,143	-		PFLU_RS30435	0.39	-0.3
1,330,143	-		PFLU_RS30435	0.39	+1.1
1,330,143	-		PFLU_RS30435	0.39	-0.1
1,330,143	-		PFLU_RS30435	0.39	+0.7
1,330,143	-		PFLU_RS30435	0.39	-0.7
1,330,143	-		PFLU_RS30435	0.39	-1.3
1,330,143	-		PFLU_RS30435	0.39	-1.0
1,330,148	+		PFLU_RS30435	0.42	-1.9
1,330,148	+		PFLU_RS30435	0.42	+0.1
1,330,148	+		PFLU_RS30435	0.42	-0.2
1,330,149	-		PFLU_RS30435	0.43	+0.2
1,330,149	-		PFLU_RS30435	0.43	+0.4
1,330,225	+				+0.0
1,330,225	+				+0.0
1,330,225	+				+0.9
1,330,226	-				-1.7
1,330,226	-				+0.5
1,330,226	-				+0.3
1,330,226	-				-0.1
1,330,229	+				-0.3
1,330,229	+				+0.4
1,330,229	+				-0.7
1,330,229	+				-0.1
1,330,230	-				-1.3
1,330,230	-				+1.2
1,330,291	+				-2.0
1,330,367	+				-2.7
1,330,367	+				+0.2
1,330,367	+				-0.6
1,330,367	+				+0.0
1,330,368	-				+0.9
1,330,368	-				+0.3
1,330,375	-				+2.5
1,330,375	-				+0.8
1,330,375	-				+0.5
1,330,383	+				-0.1
1,330,383	+				-0.3
1,330,383	+				-0.1
1,330,383	+				+0.6
1,330,384	-				+0.2
1,330,384	-				-0.4
1,330,384	-				+0.8
1,330,384	-				-1.0
1,330,390	+				-0.2
1,330,390	+				+1.5
1,330,390	+				-2.1
1,330,390	+				-0.2
1,330,390	+				-0.4
1,330,390	+				+2.3
1,330,390	+				+0.1
1,330,391	-				+1.7
1,330,391	-				+1.8
1,330,391	-				+0.7
1,330,391	-				+0.9
1,330,391	-				+0.5
1,330,391	-				+0.0
1,330,391	-				+1.1
1,330,464	-				+0.1
1,330,485	-				-1.3
1,330,489	-				-0.2
1,330,517	+				-0.4
1,330,518	-				-0.5
1,330,527	-				+0.4
1,330,541	+				-0.1
1,330,541	+				-0.5
1,330,541	+				+1.0
1,330,541	+				+0.6
1,330,541	+				-0.8
1,330,542	-				+0.2
1,330,542	-				+2.5
1,330,542	-				-0.2
1,330,542	-				+0.2
1,330,542	-				+1.5
1,330,542	-				-0.2
1,330,542	-				+0.7
1,330,552	+				-0.7
1,330,552	+				-0.6
1,330,552	+				+0.5
1,330,552	+				-1.0
1,330,552	+				+0.7
1,330,552	+				-0.6
1,330,552	+				+0.3
1,330,552	+				-0.3
1,330,552	+				+1.5
1,330,552	+				+1.0
1,330,552	+				+0.1
1,330,552	+				+0.4
1,330,552	+				+1.0
1,330,552	+				-1.2
1,330,552	+				-1.3
1,330,552	+				-0.2
1,330,553	-				-0.6
1,330,553	-				-1.4
1,330,553	-				+0.2
1,330,553	-				+0.5
1,330,553	-				-0.1
1,330,553	-				-0.2
1,330,553	-				+1.0
1,330,553	-				-0.6
1,330,553	-				+0.5
1,330,553	-				+0.4
1,330,553	-				+0.6
1,330,553	-				+0.8
1,330,565	+				+0.5
1,330,565	+				-0.7
1,330,565	+				+0.8
1,330,565	+				-0.3
1,330,566	-				+0.8
1,330,566	-				+1.1
1,330,567	+				-0.5
1,330,568	-				-0.8
1,330,615	+				-0.0
1,330,615	+				+0.1
1,330,615	+				-0.8
1,330,615	+				+0.4
1,330,615	+				-0.4
1,330,615	+				-0.5
1,330,616	-				+0.3
1,330,616	-				+1.0
1,330,616	-				+1.4
1,330,616	-				+0.8
1,330,616	-				-0.7
1,330,688	+				-0.8
1,330,688	+				+1.1
1,330,688	+				+2.0
1,330,715	+				-0.8
1,330,715	+				-0.8
1,330,715	+				+2.0
1,330,715	+				+0.0
1,330,716	-				+0.2
1,330,716	-				+1.4
1,330,723	+				-1.7
1,330,723	+				+0.5
1,330,724	-				+1.1
1,330,724	-				+1.3
1,330,829	+		PFLU_RS05955	0.12	-0.1
1,330,829	+		PFLU_RS05955	0.12	-1.0
1,330,829	+		PFLU_RS05955	0.12	-2.0
1,330,829	+		PFLU_RS05955	0.12	+0.7
1,330,829	+		PFLU_RS05955	0.12	-0.8
1,330,829	+		PFLU_RS05955	0.12	+0.8
1,330,829	+		PFLU_RS05955	0.12	-0.4
1,330,829	+		PFLU_RS05955	0.12	+1.2
1,330,829	+		PFLU_RS05955	0.12	+0.3
1,330,829	+		PFLU_RS05955	0.12	+0.8
1,330,829	+		PFLU_RS05955	0.12	-0.4
1,330,829	+		PFLU_RS05955	0.12	-0.5
1,330,829	+		PFLU_RS05955	0.12	+0.5
1,330,829	+		PFLU_RS05955	0.12	-0.2
1,330,829	+		PFLU_RS05955	0.12	-0.3
1,330,829	+		PFLU_RS05955	0.12	+0.1
1,330,829	+		PFLU_RS05955	0.12	+2.1
1,330,830	-		PFLU_RS05955	0.12	+0.6
1,330,830	-		PFLU_RS05955	0.12	-1.5
1,330,830	-		PFLU_RS05955	0.12	+0.5
1,330,830	-		PFLU_RS05955	0.12	+0.9
1,330,830	-		PFLU_RS05955	0.12	+0.9
1,330,830	-		PFLU_RS05955	0.12	+1.3
1,330,830	-		PFLU_RS05955	0.12	-0.1
1,330,830	-		PFLU_RS05955	0.12	+0.2
1,330,830	-		PFLU_RS05955	0.12	-0.5
1,330,830	-		PFLU_RS05955	0.12	-0.1
1,330,830	-		PFLU_RS05955	0.12	+1.2
1,330,830	-		PFLU_RS05955	0.12	+0.5
1,330,830	-		PFLU_RS05955	0.12	+1.5
1,330,830	-		PFLU_RS05955	0.12	+0.4
1,330,830	-		PFLU_RS05955	0.12	+0.4
1,330,830	-		PFLU_RS05955	0.12	-0.3
1,330,973	+		PFLU_RS05955	0.20	+0.1
1,330,973	+		PFLU_RS05955	0.20	+1.1
1,330,974	-		PFLU_RS05955	0.20	-0.2
1,330,974	-		PFLU_RS05955	0.20	-0.8
1,330,974	-		PFLU_RS05955	0.20	+0.4
1,331,082	+		PFLU_RS05955	0.25	+0.5
1,331,083	-		PFLU_RS05955	0.25	-0.5
1,331,083	-		PFLU_RS05955	0.25	-0.1
1,331,083	-		PFLU_RS05955	0.25	+1.5
1,331,189	+		PFLU_RS05955	0.31	+1.7
1,331,189	+		PFLU_RS05955	0.31	-0.1
1,331,189	+		PFLU_RS05955	0.31	+0.4