Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3341

Experiment: LB, pH6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, pH6
3,471,482	-				-1.5
3,471,534	-		Ga0059261_3340	0.14	-1.3
3,471,701	-		Ga0059261_3340	0.29	-0.3
3,471,701	-		Ga0059261_3340	0.29	-1.4
3,471,701	-		Ga0059261_3340	0.29	-1.2
3,471,778	+		Ga0059261_3340	0.37	+0.5
3,471,779	-		Ga0059261_3340	0.37	-0.7
3,471,889	+		Ga0059261_3340	0.47	-1.3
3,471,889	+		Ga0059261_3340	0.47	-0.2
3,471,890	-		Ga0059261_3340	0.47	-0.0
3,471,890	-		Ga0059261_3340	0.47	-1.1
3,471,989	-				-0.3
3,471,989	-		Ga0059261_3340	0.57	-0.4
3,472,073	+		Ga0059261_3340	0.65	+0.0
3,472,075	+		Ga0059261_3340	0.65	-2.2
3,472,075	+		Ga0059261_3340	0.65	-0.3
3,472,075	+		Ga0059261_3340	0.65	+0.1
3,472,075	+		Ga0059261_3340	0.65	-1.9
3,472,075	+		Ga0059261_3340	0.65	-2.3
3,472,076	-		Ga0059261_3340	0.65	+0.2
3,472,076	-		Ga0059261_3340	0.65	-0.5
3,472,076	-		Ga0059261_3340	0.65	-0.4
3,472,076	-		Ga0059261_3340	0.65	-0.5
3,472,076	-		Ga0059261_3340	0.65	-0.5
3,472,076	-		Ga0059261_3340	0.65	-1.9
3,472,076	-		Ga0059261_3340	0.65	-0.3
3,472,076	-		Ga0059261_3340	0.65	+0.3
3,472,264	+		Ga0059261_3340	0.83	-1.0
3,472,264	+		Ga0059261_3340	0.83	-0.5
3,472,265	-		Ga0059261_3340	0.83	+0.3
3,472,439	-				-0.5
3,472,439	-				+0.5
3,472,439	-				+0.1
3,472,457	+				-0.7
3,472,457	+				+0.2
3,472,457	+				-1.6
3,472,457	+				-2.1
3,472,457	+				-2.9
3,472,458	-				+0.4
3,472,458	-				+0.0
3,472,458	-				-0.8
3,472,458	-				-0.2
3,472,503	-				-0.9
3,472,503	-				-1.1
3,472,503	-				-1.3
3,472,565	+		Ga0059261_3341	0.20	-1.9
3,472,566	-		Ga0059261_3341	0.20	-0.3
3,472,566	-		Ga0059261_3341	0.20	-2.1
3,472,566	-		Ga0059261_3341	0.20	-1.4
3,472,566	-		Ga0059261_3341	0.20	-0.5
3,472,566	-		Ga0059261_3341	0.20	-1.4
3,472,645	+		Ga0059261_3341	0.35	-0.9
3,472,645	+		Ga0059261_3341	0.35	-1.9
3,472,645	+		Ga0059261_3341	0.35	-0.7
3,472,721	+		Ga0059261_3341	0.49	-1.4
3,472,721	+		Ga0059261_3341	0.49	-0.8
3,472,721	+		Ga0059261_3341	0.49	-1.0
3,472,721	+		Ga0059261_3341	0.49	+0.4
3,472,721	+		Ga0059261_3341	0.49	+0.6
3,472,721	+		Ga0059261_3341	0.49	-2.3
3,472,722	-		Ga0059261_3341	0.49	-1.9
3,472,722	-		Ga0059261_3341	0.49	-0.1
3,472,722	-		Ga0059261_3341	0.49	+0.7
3,472,722	-		Ga0059261_3341	0.49	-1.3
3,472,722	-		Ga0059261_3341	0.49	-1.0
3,473,017	+				+0.4
3,473,018	-				-2.0
3,473,059	+				-0.2
3,473,059	+				-1.3
3,473,059	+				-0.8
3,473,059	+				-0.7
3,473,060	-				-1.6
3,473,060	-				-0.1
3,473,060	-				-0.4
3,473,061	+				+0.3
3,473,061	+				-0.3
3,473,062	-				+0.2
3,473,062	-				-0.1
3,473,130	+				-0.3
3,473,130	+				-0.0
3,473,130	+				+0.5
3,473,130	+				+0.4
3,473,130	+				-0.6
3,473,158	+				+0.4
3,473,158	+				+0.6
3,473,158	+				-0.0
3,473,158	+				-0.9
3,473,158	+				+0.0
3,473,159	-				+0.2
3,473,159	-				+0.1
3,473,159	-				-0.7
3,473,159	-				+0.7
3,473,159	-				+0.4
3,473,159	-				+0.8
3,473,347	+		Ga0059261_3342	0.22	+0.4
3,473,347	+		Ga0059261_3342	0.22	-0.1
3,473,348	-		Ga0059261_3342	0.22	-0.7
3,473,348	-		Ga0059261_3342	0.22	-0.1
3,473,348	-		Ga0059261_3342	0.22	-1.4
3,473,348	-		Ga0059261_3342	0.22	-1.6
3,473,348	-				+2.0
3,473,455	+		Ga0059261_3342	0.31	+0.5
3,473,455	+		Ga0059261_3342	0.31	+1.2
3,473,456	-		Ga0059261_3342	0.31	+0.1
3,473,456	-		Ga0059261_3342	0.31	-0.5
3,473,456	-		Ga0059261_3342	0.31	+0.6
3,473,473	+		Ga0059261_3342	0.33	+1.7
3,473,473	+		Ga0059261_3342	0.33	-0.1
3,473,473	+		Ga0059261_3342	0.33	-0.9
3,473,474	-		Ga0059261_3342	0.33	+0.2
3,473,474	-		Ga0059261_3342	0.33	-0.4
3,473,474	-				-2.3
3,473,533	+		Ga0059261_3342	0.38	-0.5
3,473,533	+		Ga0059261_3342	0.38	+0.1
3,473,533	+		Ga0059261_3342	0.38	+1.0
3,473,533	+		Ga0059261_3342	0.38	-0.2
3,473,534	-		Ga0059261_3342	0.38	-0.3
3,473,534	-		Ga0059261_3342	0.38	-0.5
3,473,534	-		Ga0059261_3342	0.38	-0.5
3,473,534	-		Ga0059261_3342	0.38	+0.1
3,473,534	-		Ga0059261_3342	0.38	-0.8
3,473,534	-		Ga0059261_3342	0.38	-0.3
3,473,534	-		Ga0059261_3342	0.38	-0.1
3,473,534	-		Ga0059261_3342	0.38	+0.2
3,473,534	-				-0.3
3,473,542	+		Ga0059261_3342	0.39	+0.3
3,473,542	+		Ga0059261_3342	0.39	+1.0
3,473,542	+		Ga0059261_3342	0.39	-0.4
3,473,542	+		Ga0059261_3342	0.39	+0.5
3,473,543	-		Ga0059261_3342	0.39	+0.4
3,473,543	-		Ga0059261_3342	0.39	+1.0
3,473,543	-		Ga0059261_3342	0.39	+1.4
3,473,543	-		Ga0059261_3342	0.39	+0.7
3,473,543	-		Ga0059261_3342	0.39	+0.0
3,473,543	-		Ga0059261_3342	0.39	-0.7
3,473,543	-		Ga0059261_3342	0.39	+0.2
3,473,543	-		Ga0059261_3342	0.39	+1.4
3,473,551	+		Ga0059261_3342	0.39	-1.0
3,473,552	-		Ga0059261_3342	0.40	+0.5
3,473,552	-		Ga0059261_3342	0.40	-0.1
3,473,552	-		Ga0059261_3342	0.40	-0.3
3,473,602	+		Ga0059261_3342	0.44	-0.0
3,473,602	+		Ga0059261_3342	0.44	+0.5
3,473,602	+		Ga0059261_3342	0.44	+2.3
3,473,604	+		Ga0059261_3342	0.44	+0.7
3,473,604	+		Ga0059261_3342	0.44	+0.6
3,473,604	+		Ga0059261_3342	0.44	-0.0
3,473,604	+		Ga0059261_3342	0.44	+0.5
3,473,605	-		Ga0059261_3342	0.44	-0.1
3,473,606	-		Ga0059261_3342	0.44	+1.1
3,473,942	-		Ga0059261_3342	0.73	-0.0