Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30070 and AO356_30075 are separated by 20 nucleotides AO356_30075 and AO356_30080 are separated by 11 nucleotides AO356_30080 and AO356_30085 are separated by 72 nucleotides
AO356_30070: AO356_30070 - glutamate synthase, at 7,018,433 to 7,019,776
_30070
AO356_30075: AO356_30075 - protein glxC, at 7,019,797 to 7,020,480
_30075
AO356_30080: AO356_30080 - amidophosphoribosyltransferase, at 7,020,492 to 7,021,397
_30080
AO356_30085: AO356_30085 - glutamine synthetase, at 7,021,470 to 7,022,804
_30085
Position (kb) 7019
7020
7021 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 7018.803 kb on - strand, within AO356_30070 at 7018.803 kb on - strand, within AO356_30070 at 7019.049 kb on + strand, within AO356_30070 at 7019.053 kb on - strand, within AO356_30070 at 7019.079 kb on + strand, within AO356_30070 at 7019.080 kb on - strand, within AO356_30070 at 7019.080 kb on - strand, within AO356_30070 at 7019.246 kb on - strand, within AO356_30070 at 7019.343 kb on + strand, within AO356_30070 at 7019.343 kb on + strand, within AO356_30070 at 7019.344 kb on - strand, within AO356_30070 at 7019.349 kb on + strand, within AO356_30070 at 7019.668 kb on - strand at 7019.668 kb on - strand at 7019.668 kb on - strand at 7019.776 kb on + strand at 7019.776 kb on + strand at 7019.777 kb on - strand at 7019.777 kb on - strand at 7019.832 kb on - strand at 7019.832 kb on - strand at 7019.832 kb on - strand at 7019.874 kb on + strand, within AO356_30075 at 7019.874 kb on + strand, within AO356_30075 at 7019.984 kb on + strand, within AO356_30075 at 7019.984 kb on + strand, within AO356_30075 at 7019.984 kb on + strand, within AO356_30075 at 7019.984 kb on + strand, within AO356_30075 at 7019.984 kb on + strand, within AO356_30075 at 7019.985 kb on - strand, within AO356_30075 at 7020.302 kb on + strand, within AO356_30075 at 7020.303 kb on - strand, within AO356_30075 at 7020.472 kb on - strand at 7020.480 kb on + strand at 7020.481 kb on - strand at 7020.481 kb on - strand at 7020.493 kb on + strand at 7020.517 kb on + strand at 7020.517 kb on + strand at 7020.517 kb on + strand at 7020.517 kb on + strand at 7020.517 kb on + strand at 7020.518 kb on - strand at 7020.518 kb on - strand at 7020.518 kb on - strand at 7020.518 kb on - strand at 7020.521 kb on + strand at 7020.522 kb on - strand at 7020.607 kb on + strand, within AO356_30080 at 7020.608 kb on - strand, within AO356_30080 at 7021.273 kb on + strand, within AO356_30080 at 7021.314 kb on - strand at 7021.383 kb on + strand at 7021.397 kb on + strand at 7021.397 kb on + strand at 7021.398 kb on - strand at 7021.398 kb on - strand at 7021.398 kb on - strand at 7021.398 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 7,018,803 - AO356_30070 0.28 +0.1 7,018,803 - AO356_30070 0.28 +3.6 7,019,049 + AO356_30070 0.46 -0.6 7,019,053 - AO356_30070 0.46 -0.4 7,019,079 + AO356_30070 0.48 +0.3 7,019,080 - AO356_30070 0.48 +1.7 7,019,080 - AO356_30070 0.48 +0.6 7,019,246 - AO356_30070 0.60 -0.6 7,019,343 + AO356_30070 0.68 -0.4 7,019,343 + AO356_30070 0.68 +0.0 7,019,344 - AO356_30070 0.68 +0.2 7,019,349 + AO356_30070 0.68 -0.9 7,019,668 - +0.2 7,019,668 - +0.2 7,019,668 - -0.3 7,019,776 + +0.7 7,019,776 + +0.5 7,019,777 - -0.4 7,019,777 - -0.8 7,019,832 - +0.2 7,019,832 - +0.0 7,019,832 - -0.7 7,019,874 + AO356_30075 0.11 +1.5 7,019,874 + AO356_30075 0.11 -0.1 7,019,984 + AO356_30075 0.27 +0.9 7,019,984 + AO356_30075 0.27 +0.8 7,019,984 + AO356_30075 0.27 -0.0 7,019,984 + AO356_30075 0.27 +0.0 7,019,984 + AO356_30075 0.27 +1.0 7,019,985 - AO356_30075 0.27 +0.2 7,020,302 + AO356_30075 0.74 +0.7 7,020,303 - AO356_30075 0.74 -0.6 7,020,472 - +0.8 7,020,480 + -0.9 7,020,481 - +1.0 7,020,481 - +0.6 7,020,493 + -0.5 7,020,517 + -1.1 7,020,517 + +0.6 7,020,517 + -0.4 7,020,517 + +0.0 7,020,517 + +1.0 7,020,518 - -0.6 7,020,518 - +0.7 7,020,518 - +0.4 7,020,518 - -0.2 7,020,521 + -0.4 7,020,522 - -1.5 7,020,607 + AO356_30080 0.13 +0.1 7,020,608 - AO356_30080 0.13 +0.4 7,021,273 + AO356_30080 0.86 +1.4 7,021,314 - -0.5 7,021,383 + +1.7 7,021,397 + +1.5 7,021,397 + +0.0 7,021,398 - -0.3 7,021,398 - +0.5 7,021,398 - -1.9 7,021,398 - -0.1
Or see this region's nucleotide sequence