Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22625 and AO356_22630 are separated by 10 nucleotides AO356_22630 and AO356_22635 are separated by 857 nucleotides
AO356_22625: AO356_22625 - nitrate ABC transporter ATP-binding protein, at 5,055,547 to 5,056,851
_22625
AO356_22630: AO356_22630 - sulfonate ABC transporter permease, at 5,056,862 to 5,058,583
_22630
AO356_22635: AO356_22635 - transposase, at 5,059,441 to 5,059,743
_22635
Position (kb) 5056
5057
5058
5059 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.333 kb on + strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.473 kb on + strand, within AO356_22625 at 5056.522 kb on + strand, within AO356_22625 at 5056.797 kb on - strand at 5056.840 kb on + strand at 5056.841 kb on - strand at 5056.841 kb on - strand at 5056.897 kb on - strand at 5056.897 kb on - strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.115 kb on + strand, within AO356_22630 at 5057.116 kb on - strand, within AO356_22630 at 5057.241 kb on + strand, within AO356_22630 at 5057.241 kb on + strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.494 kb on + strand, within AO356_22630 at 5057.494 kb on + strand, within AO356_22630 at 5057.736 kb on + strand, within AO356_22630 at 5057.736 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5058.097 kb on - strand, within AO356_22630 at 5058.129 kb on + strand, within AO356_22630 at 5058.238 kb on + strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.277 kb on + strand, within AO356_22630 at 5058.402 kb on + strand, within AO356_22630 at 5058.402 kb on + strand, within AO356_22630 at 5058.402 kb on + strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.488 kb on + strand at 5058.488 kb on + strand at 5058.488 kb on + strand at 5058.489 kb on - strand at 5058.489 kb on - strand at 5058.489 kb on - strand at 5058.489 kb on - strand at 5058.527 kb on + strand at 5058.527 kb on + strand at 5058.527 kb on + strand at 5058.528 kb on - strand at 5058.621 kb on + strand at 5058.621 kb on + strand at 5058.622 kb on - strand at 5058.624 kb on + strand at 5058.625 kb on - strand at 5058.625 kb on - strand at 5058.625 kb on - strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.769 kb on + strand at 5058.771 kb on + strand at 5058.771 kb on + strand at 5058.772 kb on - strand at 5058.772 kb on - strand at 5058.772 kb on - strand at 5058.772 kb on - strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.780 kb on - strand at 5058.780 kb on - strand at 5058.780 kb on - strand at 5058.780 kb on - strand at 5058.781 kb on + strand at 5058.782 kb on - strand at 5058.813 kb on + strand at 5058.856 kb on + strand at 5058.857 kb on - strand at 5058.857 kb on - strand at 5058.857 kb on - strand at 5058.956 kb on - strand at 5058.963 kb on + strand at 5058.988 kb on - strand at 5059.014 kb on + strand at 5059.073 kb on + strand at 5059.074 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 5,056,100 + AO356_22625 0.42 +0.5 5,056,100 + AO356_22625 0.42 -0.1 5,056,100 + AO356_22625 0.42 -0.1 5,056,100 + AO356_22625 0.42 -0.3 5,056,100 + AO356_22625 0.42 +0.4 5,056,101 - AO356_22625 0.42 +0.1 5,056,101 - AO356_22625 0.42 +0.5 5,056,101 - AO356_22625 0.42 -0.6 5,056,101 - AO356_22625 0.42 +0.7 5,056,245 + AO356_22625 0.53 -0.5 5,056,245 + AO356_22625 0.53 -0.2 5,056,333 + AO356_22625 0.60 +0.1 5,056,334 - AO356_22625 0.60 -0.2 5,056,334 - AO356_22625 0.60 +0.2 5,056,334 - AO356_22625 0.60 -0.5 5,056,473 + AO356_22625 0.71 +0.5 5,056,522 + AO356_22625 0.75 +0.5 5,056,797 - +1.4 5,056,840 + +0.6 5,056,841 - +0.1 5,056,841 - +0.9 5,056,897 - +0.3 5,056,897 - -1.1 5,057,025 + -0.6 5,057,025 + +0.2 5,057,025 + -1.3 5,057,025 + -0.3 5,057,026 - +0.0 5,057,026 - -0.2 5,057,026 - +0.9 5,057,026 - +0.3 5,057,026 - +0.1 5,057,112 + AO356_22630 0.15 -0.4 5,057,112 + AO356_22630 0.15 +1.1 5,057,112 + AO356_22630 0.15 +1.2 5,057,112 + AO356_22630 0.15 -0.2 5,057,112 + AO356_22630 0.15 +0.5 5,057,113 - AO356_22630 0.15 -0.6 5,057,113 - AO356_22630 0.15 +0.9 5,057,113 - AO356_22630 0.15 -0.1 5,057,113 - AO356_22630 0.15 +0.1 5,057,113 - AO356_22630 0.15 +0.3 5,057,113 - AO356_22630 0.15 -0.3 5,057,113 - AO356_22630 0.15 +0.8 5,057,113 - AO356_22630 0.15 -1.5 5,057,115 + AO356_22630 0.15 +0.6 5,057,116 - AO356_22630 0.15 +0.4 5,057,241 + AO356_22630 0.22 -0.3 5,057,241 + AO356_22630 0.22 -0.8 5,057,242 - AO356_22630 0.22 +0.2 5,057,242 - AO356_22630 0.22 +1.3 5,057,242 - AO356_22630 0.22 -0.4 5,057,242 - AO356_22630 0.22 +1.2 5,057,242 - AO356_22630 0.22 +0.4 5,057,242 - AO356_22630 0.22 -1.3 5,057,433 - AO356_22630 0.33 +0.0 5,057,433 - AO356_22630 0.33 +0.1 5,057,433 - AO356_22630 0.33 +0.5 5,057,433 - AO356_22630 0.33 -1.5 5,057,494 + AO356_22630 0.37 -0.1 5,057,494 + AO356_22630 0.37 +0.7 5,057,736 + AO356_22630 0.51 +0.0 5,057,736 + AO356_22630 0.51 -0.2 5,057,829 + AO356_22630 0.56 +0.2 5,057,829 + AO356_22630 0.56 +0.7 5,057,829 + AO356_22630 0.56 +0.3 5,058,097 - AO356_22630 0.72 -0.9 5,058,129 + AO356_22630 0.74 -0.2 5,058,238 + AO356_22630 0.80 -1.4 5,058,239 - AO356_22630 0.80 -1.1 5,058,239 - AO356_22630 0.80 +0.4 5,058,239 - AO356_22630 0.80 +0.7 5,058,239 - AO356_22630 0.80 +0.2 5,058,277 + AO356_22630 0.82 +1.5 5,058,402 + AO356_22630 0.89 -0.3 5,058,402 + AO356_22630 0.89 +0.1 5,058,402 + AO356_22630 0.89 +1.0 5,058,403 - AO356_22630 0.89 -0.6 5,058,403 - AO356_22630 0.89 -0.9 5,058,403 - AO356_22630 0.89 +0.3 5,058,403 - AO356_22630 0.89 +0.3 5,058,488 + +0.2 5,058,488 + -0.4 5,058,488 + +0.5 5,058,489 - +0.7 5,058,489 - -0.9 5,058,489 - -0.9 5,058,489 - +0.6 5,058,527 + +1.0 5,058,527 + -0.3 5,058,527 + -0.5 5,058,528 - +0.9 5,058,621 + -0.9 5,058,621 + -0.2 5,058,622 - +0.4 5,058,624 + -0.9 5,058,625 - +0.3 5,058,625 - +0.5 5,058,625 - -0.8 5,058,723 + +1.3 5,058,723 + -0.8 5,058,723 + +3.1 5,058,723 + +0.0 5,058,723 + +1.4 5,058,723 + +0.1 5,058,723 + +0.6 5,058,724 - -0.1 5,058,724 - +0.6 5,058,724 - -0.0 5,058,724 - -0.9 5,058,724 - +0.6 5,058,769 + +0.5 5,058,771 + -0.1 5,058,771 + -0.1 5,058,772 - +0.3 5,058,772 - -0.9 5,058,772 - -0.5 5,058,772 - -0.5 5,058,779 + -1.1 5,058,779 + -0.2 5,058,779 + +0.1 5,058,779 + -0.4 5,058,779 + +0.6 5,058,779 + +0.1 5,058,779 + +0.7 5,058,779 + +0.1 5,058,779 + +1.1 5,058,779 + +0.3 5,058,779 + -0.5 5,058,779 + +0.5 5,058,780 - -0.1 5,058,780 - +0.1 5,058,780 - +0.1 5,058,780 - -0.5 5,058,781 + +0.2 5,058,782 - +0.4 5,058,813 + +0.1 5,058,856 + -2.1 5,058,857 - -0.3 5,058,857 - +0.3 5,058,857 - +0.1 5,058,956 - +0.1 5,058,963 + +0.1 5,058,988 - +0.1 5,059,014 + +0.1 5,059,073 + +1.0 5,059,074 - +0.1
Or see this region's nucleotide sequence