Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09505 and AO356_09515 are separated by 620 nucleotides AO356_09515 and AO356_09520 are separated by 81 nucleotides AO356_09520 and AO356_09525 overlap by 8 nucleotides AO356_09525 and AO356_09530 are separated by 24 nucleotides
AO356_09505: AO356_09505 - ubiquinone biosynthesis methyltransferase UbiE, at 2,153,325 to 2,154,095
_09505
AO356_09515: AO356_09515 - ubiquinone biosynthesis protein UbiB, at 2,154,716 to 2,156,320
_09515
AO356_09520: AO356_09520 - phosphoribosyl-AMP cyclohydrolase, at 2,156,402 to 2,156,800
_09520
AO356_09525: AO356_09525 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) , at 2,156,793 to 2,157,125
_09525
AO356_09530: AO356_09530 - preprotein translocase subunit SecA, at 2,157,150 to 2,157,437
_09530
Position (kb)
2154
2155
2156
2157 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2154.083 kb on + strand at 2154.452 kb on + strand at 2154.452 kb on + strand at 2156.484 kb on + strand, within AO356_09520 at 2156.484 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.549 kb on + strand, within AO356_09520 at 2156.550 kb on - strand, within AO356_09520 at 2156.711 kb on + strand, within AO356_09520 at 2156.777 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.788 kb on + strand at 2156.789 kb on - strand at 2156.789 kb on - strand at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.862 kb on + strand, within AO356_09525 at 2156.877 kb on + strand, within AO356_09525 at 2156.877 kb on + strand, within AO356_09525 at 2156.878 kb on - strand, within AO356_09525 at 2157.055 kb on + strand, within AO356_09525
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 2,154,083 + +1.5 2,154,452 + -0.1 2,154,452 + -1.3 2,156,484 + AO356_09520 0.21 -2.4 2,156,484 + AO356_09520 0.21 -2.1 2,156,549 + AO356_09520 0.37 -2.5 2,156,549 + AO356_09520 0.37 -2.7 2,156,549 + AO356_09520 0.37 -1.7 2,156,549 + AO356_09520 0.37 -3.3 2,156,549 + AO356_09520 0.37 -2.1 2,156,549 + AO356_09520 0.37 -2.0 2,156,549 + AO356_09520 0.37 -0.3 2,156,549 + AO356_09520 0.37 +0.3 2,156,549 + AO356_09520 0.37 -1.3 2,156,549 + AO356_09520 0.37 -3.2 2,156,550 - AO356_09520 0.37 -1.7 2,156,711 + AO356_09520 0.77 -0.9 2,156,777 + -0.2 2,156,788 + -1.6 2,156,788 + -0.0 2,156,788 + -1.1 2,156,788 + -0.4 2,156,788 + -0.8 2,156,788 + -1.5 2,156,788 + -2.6 2,156,788 + -0.5 2,156,788 + -1.6 2,156,789 - -0.7 2,156,789 - -0.9 2,156,862 + AO356_09525 0.21 -3.6 2,156,862 + AO356_09525 0.21 -3.3 2,156,862 + AO356_09525 0.21 -1.0 2,156,862 + AO356_09525 0.21 -1.8 2,156,862 + AO356_09525 0.21 -1.7 2,156,862 + AO356_09525 0.21 -2.5 2,156,862 + AO356_09525 0.21 -4.0 2,156,862 + AO356_09525 0.21 -2.3 2,156,862 + AO356_09525 0.21 -1.5 2,156,877 + AO356_09525 0.25 -3.6 2,156,877 + AO356_09525 0.25 -3.0 2,156,878 - AO356_09525 0.26 -0.0 2,157,055 + AO356_09525 0.79 -2.5
Or see this region's nucleotide sequence