Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4154 and Dshi_4155 overlap by 1 nucleotides Dshi_4155 and Dshi_4156 are separated by 176 nucleotides Dshi_4156 and Dshi_4157 are separated by 148 nucleotides
Dshi_4154: Dshi_4154 - beta-lactamase domain protein (RefSeq), at 24 to 977
_4154
Dshi_4155: Dshi_4155 - hypothetical protein (RefSeq), at 977 to 1,759
_4155
Dshi_4156: Dshi_4156 - GAF modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 1,936 to 3,684
_4156
Dshi_4157: Dshi_4157 - monooxygenase protein, putative (RefSeq), at 3,833 to 5,632
_4157
Position (kb)
1
2
3
4 Strain fitness (log2 ratio)
-1
0
1
2
3 at 0.993 kb on + strand at 1.004 kb on + strand at 1.130 kb on - strand, within Dshi_4155 at 1.233 kb on - strand, within Dshi_4155 at 1.246 kb on - strand, within Dshi_4155 at 1.248 kb on + strand, within Dshi_4155 at 1.372 kb on + strand, within Dshi_4155 at 1.416 kb on + strand, within Dshi_4155 at 1.581 kb on - strand, within Dshi_4155 at 1.942 kb on - strand at 2.014 kb on - strand at 2.297 kb on + strand, within Dshi_4156 at 2.398 kb on + strand, within Dshi_4156 at 2.398 kb on + strand, within Dshi_4156 at 2.506 kb on + strand, within Dshi_4156 at 2.716 kb on + strand, within Dshi_4156 at 3.048 kb on - strand, within Dshi_4156 at 3.129 kb on - strand, within Dshi_4156 at 3.159 kb on - strand, within Dshi_4156 at 3.383 kb on + strand, within Dshi_4156 at 3.497 kb on - strand, within Dshi_4156 at 3.626 kb on - strand at 3.681 kb on - strand at 3.857 kb on - strand at 3.976 kb on + strand at 4.027 kb on + strand, within Dshi_4157 at 4.150 kb on - strand, within Dshi_4157 at 4.480 kb on + strand, within Dshi_4157 at 4.488 kb on - strand, within Dshi_4157 at 4.501 kb on - strand, within Dshi_4157 at 4.560 kb on + strand, within Dshi_4157 at 4.568 kb on - strand, within Dshi_4157
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 993 + +0.9 1,004 + +0.9 1,130 - Dshi_4155 0.20 -0.1 1,233 - Dshi_4155 0.33 +0.6 1,246 - Dshi_4155 0.34 +0.8 1,248 + Dshi_4155 0.35 +0.0 1,372 + Dshi_4155 0.50 +1.2 1,416 + Dshi_4155 0.56 +1.9 1,581 - Dshi_4155 0.77 -0.8 1,942 - +0.7 2,014 - -0.4 2,297 + Dshi_4156 0.21 +0.6 2,398 + Dshi_4156 0.26 +1.0 2,398 + Dshi_4156 0.26 +1.4 2,506 + Dshi_4156 0.33 +0.5 2,716 + Dshi_4156 0.45 +0.4 3,048 - Dshi_4156 0.64 +0.2 3,129 - Dshi_4156 0.68 -0.4 3,159 - Dshi_4156 0.70 +1.2 3,383 + Dshi_4156 0.83 +0.6 3,497 - Dshi_4156 0.89 +0.4 3,626 - -0.6 3,681 - +0.7 3,857 - +2.9 3,976 + +1.1 4,027 + Dshi_4157 0.11 -0.6 4,150 - Dshi_4157 0.18 +0.2 4,480 + Dshi_4157 0.36 +0.1 4,488 - Dshi_4157 0.36 -1.0 4,501 - Dshi_4157 0.37 -0.2 4,560 + Dshi_4157 0.40 +0.8 4,568 - Dshi_4157 0.41 +0.3
Or see this region's nucleotide sequence