Experiment: dimethyl sulfone 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_824 and Pf6N2E2_825 are separated by 15 nucleotides Pf6N2E2_825 and Pf6N2E2_826 are separated by 284 nucleotides
Pf6N2E2_824 - Multidrug efflux transporter MexF, at 959,978 to 963,157
_824
Pf6N2E2_825 - Multidrug efflux membrane fusion protein MexE, at 963,173 to 964,426
_825
Pf6N2E2_826 - ABC-type amino acid transport, signal transduction systems, periplasmic component/domain, at 964,711 to 965,301
_826
Position (kb)
963
964
965 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 962.181 kb on + strand, within Pf6N2E2_824 at 962.182 kb on - strand, within Pf6N2E2_824 at 962.182 kb on - strand, within Pf6N2E2_824 at 962.426 kb on + strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.605 kb on - strand, within Pf6N2E2_824 at 962.636 kb on + strand, within Pf6N2E2_824 at 962.636 kb on + strand, within Pf6N2E2_824 at 962.682 kb on + strand, within Pf6N2E2_824 at 962.682 kb on + strand, within Pf6N2E2_824 at 962.683 kb on - strand, within Pf6N2E2_824 at 962.683 kb on - strand, within Pf6N2E2_824 at 962.694 kb on + strand, within Pf6N2E2_824 at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 963.268 kb on + strand at 963.269 kb on - strand at 963.269 kb on - strand at 963.269 kb on - strand at 963.269 kb on - strand at 963.537 kb on + strand, within Pf6N2E2_825 at 963.537 kb on + strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.541 kb on + strand, within Pf6N2E2_825 at 963.541 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.571 kb on - strand, within Pf6N2E2_825 at 963.585 kb on + strand, within Pf6N2E2_825 at 963.586 kb on - strand, within Pf6N2E2_825 at 963.711 kb on + strand, within Pf6N2E2_825 at 963.711 kb on + strand, within Pf6N2E2_825 at 963.712 kb on - strand, within Pf6N2E2_825 at 963.759 kb on + strand, within Pf6N2E2_825 at 963.759 kb on + strand, within Pf6N2E2_825 at 963.760 kb on - strand, within Pf6N2E2_825 at 963.792 kb on + strand, within Pf6N2E2_825 at 963.798 kb on + strand, within Pf6N2E2_825 at 963.799 kb on - strand, within Pf6N2E2_825 at 964.118 kb on + strand, within Pf6N2E2_825 at 964.119 kb on - strand, within Pf6N2E2_825 at 964.299 kb on - strand, within Pf6N2E2_825 at 964.299 kb on - strand, within Pf6N2E2_825 at 964.299 kb on - strand, within Pf6N2E2_825 at 964.430 kb on + strand at 964.507 kb on + strand at 964.508 kb on - strand at 964.511 kb on + strand at 964.511 kb on + strand at 964.511 kb on + strand at 964.511 kb on + strand at 964.526 kb on + strand at 964.526 kb on + strand at 964.526 kb on + strand at 964.526 kb on + strand at 964.526 kb on + strand at 964.526 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.528 kb on + strand at 964.529 kb on - strand at 964.548 kb on + strand at 964.562 kb on + strand at 964.562 kb on + strand at 964.562 kb on + strand at 964.563 kb on - strand at 964.713 kb on - strand at 964.724 kb on + strand at 964.737 kb on + strand at 964.737 kb on + strand at 964.738 kb on - strand at 964.829 kb on + strand, within Pf6N2E2_826 at 964.829 kb on + strand, within Pf6N2E2_826 at 964.982 kb on + strand, within Pf6N2E2_826 at 964.982 kb on + strand, within Pf6N2E2_826 at 964.983 kb on - strand, within Pf6N2E2_826 at 964.983 kb on - strand, within Pf6N2E2_826 at 964.983 kb on - strand, within Pf6N2E2_826 at 965.020 kb on - strand, within Pf6N2E2_826 at 965.061 kb on - strand, within Pf6N2E2_826 at 965.242 kb on + strand, within Pf6N2E2_826 at 965.242 kb on + strand, within Pf6N2E2_826 at 965.242 kb on + strand, within Pf6N2E2_826 at 965.242 kb on + strand, within Pf6N2E2_826 at 965.242 kb on + strand, within Pf6N2E2_826 at 965.243 kb on - strand at 965.243 kb on - strand at 965.243 kb on - strand at 965.243 kb on - strand at 965.243 kb on - strand at 965.255 kb on - strand at 965.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dimethyl sulfone 0.25 M remove 962,181 + Pf6N2E2_824 0.69 +2.0 962,182 - Pf6N2E2_824 0.69 +1.1 962,182 - Pf6N2E2_824 0.69 +1.2 962,426 + Pf6N2E2_824 0.77 +2.1 962,427 - Pf6N2E2_824 0.77 +1.6 962,427 - Pf6N2E2_824 0.77 +2.9 962,427 - Pf6N2E2_824 0.77 +1.2 962,427 - Pf6N2E2_824 0.77 +1.0 962,605 - Pf6N2E2_824 0.83 +1.1 962,636 + Pf6N2E2_824 0.84 +1.8 962,636 + Pf6N2E2_824 0.84 +1.8 962,682 + Pf6N2E2_824 0.85 +1.3 962,682 + Pf6N2E2_824 0.85 +1.3 962,683 - Pf6N2E2_824 0.85 +2.1 962,683 - Pf6N2E2_824 0.85 +1.1 962,694 + Pf6N2E2_824 0.85 +1.5 962,922 + +1.5 962,922 + +0.5 962,922 + +1.0 962,922 + +0.8 962,922 + +0.3 962,922 + +1.3 962,922 + -1.0 962,922 + +1.2 962,922 + +2.3 962,922 + +0.1 962,923 - +0.3 962,923 - +1.1 962,923 - +1.0 962,923 - +1.7 962,923 - +1.3 962,923 - +1.1 963,268 + +1.5 963,269 - +1.2 963,269 - +0.9 963,269 - +0.7 963,269 - +0.7 963,537 + Pf6N2E2_825 0.29 +1.7 963,537 + Pf6N2E2_825 0.29 +1.0 963,538 - Pf6N2E2_825 0.29 -0.5 963,538 - Pf6N2E2_825 0.29 +0.7 963,538 - Pf6N2E2_825 0.29 -0.6 963,538 - Pf6N2E2_825 0.29 +0.7 963,538 - Pf6N2E2_825 0.29 +0.3 963,541 + Pf6N2E2_825 0.29 +2.3 963,541 + Pf6N2E2_825 0.29 +0.9 963,570 + Pf6N2E2_825 0.32 +2.1 963,570 + Pf6N2E2_825 0.32 +1.7 963,570 + Pf6N2E2_825 0.32 +1.5 963,570 + Pf6N2E2_825 0.32 +1.3 963,571 - Pf6N2E2_825 0.32 +1.0 963,585 + Pf6N2E2_825 0.33 +1.0 963,586 - Pf6N2E2_825 0.33 +2.2 963,711 + Pf6N2E2_825 0.43 +0.8 963,711 + Pf6N2E2_825 0.43 +1.3 963,712 - Pf6N2E2_825 0.43 +1.2 963,759 + Pf6N2E2_825 0.47 -1.2 963,759 + Pf6N2E2_825 0.47 +1.1 963,760 - Pf6N2E2_825 0.47 +1.0 963,792 + Pf6N2E2_825 0.49 -1.6 963,798 + Pf6N2E2_825 0.50 +0.9 963,799 - Pf6N2E2_825 0.50 +1.4 964,118 + Pf6N2E2_825 0.75 +1.1 964,119 - Pf6N2E2_825 0.75 +2.2 964,299 - Pf6N2E2_825 0.90 +1.2 964,299 - Pf6N2E2_825 0.90 +0.9 964,299 - Pf6N2E2_825 0.90 +3.3 964,430 + +0.5 964,507 + +0.6 964,508 - +0.7 964,511 + +1.9 964,511 + -1.6 964,511 + +1.0 964,511 + -0.0 964,526 + +1.2 964,526 + +1.2 964,526 + +0.3 964,526 + +2.2 964,526 + +1.0 964,526 + +0.5 964,528 + +2.2 964,528 + -0.8 964,528 + +0.3 964,528 + -0.1 964,528 + +1.1 964,528 + +1.1 964,528 + -0.1 964,528 + +0.4 964,528 + +1.7 964,528 + +1.0 964,528 + +0.9 964,528 + -0.3 964,528 + +1.9 964,528 + +0.2 964,529 - +1.0 964,548 + +0.3 964,562 + +1.4 964,562 + +0.8 964,562 + +1.0 964,563 - -0.7 964,713 - -0.1 964,724 + +1.2 964,737 + +1.7 964,737 + +0.2 964,738 - -0.2 964,829 + Pf6N2E2_826 0.20 +0.4 964,829 + Pf6N2E2_826 0.20 +1.1 964,982 + Pf6N2E2_826 0.46 -1.8 964,982 + Pf6N2E2_826 0.46 -0.3 964,983 - Pf6N2E2_826 0.46 -0.8 964,983 - Pf6N2E2_826 0.46 -0.6 964,983 - Pf6N2E2_826 0.46 +0.5 965,020 - Pf6N2E2_826 0.52 -0.6 965,061 - Pf6N2E2_826 0.59 +0.2 965,242 + Pf6N2E2_826 0.90 +0.5 965,242 + Pf6N2E2_826 0.90 -0.9 965,242 + Pf6N2E2_826 0.90 +0.8 965,242 + Pf6N2E2_826 0.90 +0.5 965,242 + Pf6N2E2_826 0.90 -1.8 965,243 - +2.0 965,243 - -0.6 965,243 - +2.5 965,243 - +0.3 965,243 - +1.5 965,255 - -2.6 965,255 - -0.1
Or see this region's nucleotide sequence