Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2269

Experiment: dimethyl sulfone 0.25 M

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_2268 and Pf6N2E2_2269 are separated by 63 nucleotidesPf6N2E2_2269 and Pf6N2E2_2270 overlap by 8 nucleotides Pf6N2E2_2268 - Lipoprotein releasing system transmembrane protein LolE, at 2,683,135 to 2,684,379 _2268 Pf6N2E2_2269 - Lipoprotein releasing system ATP-binding protein LolD, at 2,684,443 to 2,685,141 _2269 Pf6N2E2_2270 - Lipoprotein releasing system transmembrane protein LolC, at 2,685,134 to 2,686,264 _2270 Position (kb) 2684 2685 2686Strain fitness (log2 ratio) -1 0 1at 2684.402 kb on - strandat 2684.402 kb on - strandat 2684.402 kb on - strandat 2685.142 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction dimethyl sulfone 0.25 M
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2,684,402 - +0.3
2,684,402 - +1.2
2,684,402 - -1.3
2,685,142 - +1.0

Or see this region's nucleotide sequence