Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1854

Experiment: dimethyl sulfone 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	dimethyl sulfone 0.25 M
2,197,399	+		Pf6N2E2_1853	0.60	+0.6
2,197,400	-		Pf6N2E2_1853	0.60	+0.3
2,197,402	+		Pf6N2E2_1853	0.60	-0.7
2,197,402	+		Pf6N2E2_1853	0.60	-0.0
2,197,478	+		Pf6N2E2_1853	0.65	+1.9
2,197,478	+		Pf6N2E2_1853	0.65	+0.4
2,197,532	+		Pf6N2E2_1853	0.69	-0.7
2,197,533	-		Pf6N2E2_1853	0.69	-0.4
2,197,617	+		Pf6N2E2_1853	0.75	+0.8
2,197,618	-		Pf6N2E2_1853	0.75	+0.2
2,197,648	+		Pf6N2E2_1853	0.77	+1.6
2,197,648	+		Pf6N2E2_1853	0.77	-1.3
2,197,648	+		Pf6N2E2_1853	0.77	-0.0
2,197,722	+		Pf6N2E2_1853	0.82	-1.9
2,197,785	-		Pf6N2E2_1853	0.86	+1.1
2,197,792	+		Pf6N2E2_1853	0.86	+1.6
2,197,793	-		Pf6N2E2_1853	0.86	+0.3
2,197,796	-		Pf6N2E2_1853	0.87	+0.6
2,197,807	+		Pf6N2E2_1853	0.87	+0.2
2,197,824	+		Pf6N2E2_1853	0.88	-0.2
2,197,824	+		Pf6N2E2_1853	0.88	+1.3
2,197,824	+		Pf6N2E2_1853	0.88	-1.0
2,197,858	+				+0.3
2,197,859	-				+1.1
2,197,898	-				-0.1
2,197,898	-				-1.0
2,197,898	-				+1.3
2,197,921	+				+0.6
2,197,922	-				-0.1
2,197,925	+				-0.0
2,197,925	+				-0.6
2,197,939	+				+2.2
2,197,940	-				+0.9
2,197,992	-				+1.6
2,197,998	-				-1.2
2,197,998	-				-1.3
2,197,998	-				-0.0
2,197,998	-				-1.4
2,198,015	-				-0.7
2,198,094	+				+1.1
2,198,095	-				+1.6
2,198,130	-				+2.2
2,198,141	+				-1.5
2,198,142	-				+0.8
2,198,142	-				+1.0
2,198,179	+				-0.8
2,198,180	-				+0.8
2,198,180	-				+1.2
2,198,253	+				+1.4
2,198,254	-				-0.9
2,198,254	-				-1.2
2,198,395	+		Pf6N2E2_1854	0.19	-2.2
2,198,396	-		Pf6N2E2_1854	0.19	-0.7
2,198,397	+		Pf6N2E2_1854	0.20	-0.6
2,198,397	+		Pf6N2E2_1854	0.20	+0.3
2,198,397	+		Pf6N2E2_1854	0.20	-0.6
2,198,397	+		Pf6N2E2_1854	0.20	+1.5
2,198,398	-		Pf6N2E2_1854	0.20	-0.0
2,198,398	-		Pf6N2E2_1854	0.20	+0.9
2,198,398	-		Pf6N2E2_1854	0.20	-0.4
2,198,519	+		Pf6N2E2_1854	0.28	-0.9
2,198,757	+		Pf6N2E2_1854	0.44	-0.3
2,198,757	+		Pf6N2E2_1854	0.44	-0.0
2,198,757	+		Pf6N2E2_1854	0.44	-0.0
2,198,758	-		Pf6N2E2_1854	0.44	+1.0
2,198,758	-		Pf6N2E2_1854	0.44	+0.5
2,198,758	-		Pf6N2E2_1854	0.44	-0.1
2,199,288	+		Pf6N2E2_1854	0.81	+1.4
2,199,579	-				+0.9
2,199,702	+				+0.9
2,199,702	+				-0.8
2,199,703	-				+0.3
2,199,703	-				-0.4
2,199,961	-		Pf6N2E2_1855	0.22	-0.2
2,200,006	+		Pf6N2E2_1855	0.26	-0.0
2,200,007	-		Pf6N2E2_1855	0.26	+0.4
2,200,159	+		Pf6N2E2_1855	0.40	-0.5
2,200,160	-		Pf6N2E2_1855	0.40	+0.1
2,200,160	-		Pf6N2E2_1855	0.40	+0.3
2,200,160	-		Pf6N2E2_1855	0.40	-0.3
2,200,160	-		Pf6N2E2_1855	0.40	-2.4
2,200,160	-		Pf6N2E2_1855	0.40	+0.2
2,200,160	-		Pf6N2E2_1855	0.40	+0.1
2,200,418	-		Pf6N2E2_1855	0.62	+0.6
2,200,511	-		Pf6N2E2_1855	0.70	-1.7
2,200,511	-		Pf6N2E2_1855	0.70	-0.4
2,200,553	+		Pf6N2E2_1855	0.74	-1.2
2,200,553	+		Pf6N2E2_1855	0.74	+0.4
2,200,554	-		Pf6N2E2_1855	0.74	-0.1