Strain Fitness in Pantoea sp. MT58 around IAI47_19565

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
141,283	-				+0.5
141,286	+				+0.1
141,308	+				+0.9
141,308	+				+1.7
141,308	+				+0.5
141,309	-				+1.5
141,309	-				-1.1
141,310	+				-0.9
141,310	+				-1.2
141,310	+				+1.4
141,310	+				-1.6
141,310	+				+2.3
141,311	-				+2.4
141,311	-				-2.3
141,323	-				+0.5
141,325	+				+0.1
141,347	+				+0.8
141,392	+				-2.0
141,392	+				+1.5
141,392	+				+1.5
141,413	+				+2.8
141,492	+				-2.5
141,496	+				-2.1
141,496	+				+0.8
141,502	+				+0.5
141,526	+				-0.3
141,533	+				+2.5
141,543	+				-1.9
141,543	+				-1.5
141,543	+				-1.5
141,543	+				-0.9
141,546	+				-2.1
141,546	+				+2.7
141,550	+				+1.2
141,550	+				+3.3
141,560	+				+0.2
141,588	+				-0.2
141,601	+				+0.9
141,601	+				+1.8
141,616	+				-1.7
141,616	+				+2.0
141,667	+				+1.5
141,667	+				+2.3
141,669	+				-1.2
141,669	+				+2.3
141,671	+				-0.2
141,671	+				+1.7
141,695	+				+0.7
141,695	+				+1.5
141,731	+				+3.4
141,757	+				-0.5
141,783	+				+1.1
141,783	+				-2.4
141,809	+				+3.5
141,809	+				-0.7
141,827	-				-0.7
141,870	+				-0.7
141,875	+				-1.1
141,913	+				+2.1
141,913	+				+0.6
141,913	+				-2.3
141,941	+				-0.3
141,954	+				-0.9
141,954	+				+2.2
141,954	+				+1.1
141,955	-				-0.5
141,955	-				+3.5
141,955	-				-0.2
141,971	+				-1.6
141,971	+				-1.1
141,972	-				+0.4
141,998	-				-2.3
142,011	+				-2.3
142,011	+				-0.3
142,011	+				-1.2
142,012	-				+2.7
142,012	-				-2.6
142,070	+				+0.9
142,108	-				+2.5
142,116	+				-1.3
142,130	+				+4.9
142,130	+				-1.5
142,131	-				+2.0
142,161	+				+0.5
142,175	+				+0.6
142,175	+				+3.3
142,176	-				+1.5
142,241	-				-2.4
142,241	-				-1.1
142,310	+		IAI47_19565	0.13	-2.0
142,310	+		IAI47_19565	0.13	-0.2
142,311	-		IAI47_19565	0.13	-1.5
142,312	+		IAI47_19565	0.13	-1.5
142,312	+		IAI47_19565	0.13	+2.7
142,312	+		IAI47_19565	0.13	-1.6
142,312	+		IAI47_19565	0.13	+1.5
142,313	-		IAI47_19565	0.13	+1.1
142,313	-		IAI47_19565	0.13	+1.7
142,313	-		IAI47_19565	0.13	-1.9
142,313	-		IAI47_19565	0.13	+2.5
142,316	+		IAI47_19565	0.14	-2.1
142,316	+		IAI47_19565	0.14	+0.8
142,316	+		IAI47_19565	0.14	+2.6
142,316	+		IAI47_19565	0.14	+1.1
142,316	+		IAI47_19565	0.14	+1.4
142,316	+		IAI47_19565	0.14	-1.5
142,316	+		IAI47_19565	0.14	-1.6
142,317	-		IAI47_19565	0.14	+0.1
142,335	-		IAI47_19565	0.17	-2.0
142,343	+		IAI47_19565	0.19	-1.5
142,343	+		IAI47_19565	0.19	+0.9
142,343	+		IAI47_19565	0.19	-0.7
142,344	-		IAI47_19565	0.19	+2.8
142,344	-		IAI47_19565	0.19	+2.3
142,344	-		IAI47_19565	0.19	+2.1
142,360	+		IAI47_19565	0.22	+2.9
142,361	-		IAI47_19565	0.22	-1.7
142,370	+		IAI47_19565	0.24	-0.7
142,391	+		IAI47_19565	0.28	-0.2
142,392	+		IAI47_19565	0.28	-1.6
142,451	+		IAI47_19565	0.39	-1.3
142,451	+		IAI47_19565	0.39	+2.9
142,451	+		IAI47_19565	0.39	+0.5
142,475	-		IAI47_19565	0.44	+0.9
142,475	-		IAI47_19565	0.44	-1.5
142,589	+		IAI47_19565	0.66	-0.9
142,589	+		IAI47_19565	0.66	+1.9
142,590	-		IAI47_19565	0.66	+0.0
142,603	+		IAI47_19565	0.68	+0.6
142,612	+		IAI47_19565	0.70	+1.4
142,612	+		IAI47_19565	0.70	-1.5
142,612	+		IAI47_19565	0.70	-0.4
142,612	+		IAI47_19565	0.70	-0.3
142,612	+		IAI47_19565	0.70	+4.7
142,612	+		IAI47_19565	0.70	+2.0
142,612	+		IAI47_19565	0.70	-0.3
142,613	-		IAI47_19565	0.70	+2.8
142,613	-		IAI47_19565	0.70	-2.5
142,613	-		IAI47_19565	0.70	+0.7
142,649	+		IAI47_19565	0.77	+3.1
142,650	-		IAI47_19565	0.77	-1.1
142,650	-		IAI47_19565	0.77	-0.2
142,650	-		IAI47_19565	0.77	+1.0
142,650	-		IAI47_19565	0.77	+0.8
142,657	+		IAI47_19565	0.79	+1.3
142,658	-		IAI47_19565	0.79	-1.2
142,658	-		IAI47_19565	0.79	+1.1
142,658	-		IAI47_19565	0.79	+0.3
142,658	-		IAI47_19565	0.79	+2.1
142,658	-		IAI47_19565	0.79	+2.0
142,682	+		IAI47_19565	0.83	-0.9
142,682	+		IAI47_19565	0.83	+1.5
142,682	+		IAI47_19565	0.83	-1.5
142,682	+		IAI47_19565	0.83	-0.9
142,683	-		IAI47_19565	0.84	-1.3
142,683	-		IAI47_19565	0.84	-1.6
142,683	-		IAI47_19565	0.84	+0.7
142,711	+		IAI47_19565	0.89	-0.5
142,711	+		IAI47_19565	0.89	+2.6
142,712	-		IAI47_19565	0.89	+2.1
142,716	+				+0.5
142,716	+				-1.6
142,717	-				-0.7
142,762	+				-1.5
142,762	+				+4.0
142,762	+				-1.2
142,763	-				+0.3
142,763	-				+0.5
142,766	+				+0.8
142,766	+				+2.4
142,766	+				-0.5
142,766	+				+3.0
142,766	+				+0.7
142,767	-				+0.4
142,767	-				+1.0
142,767	-				+2.1
142,767	-				+1.6
142,770	+				+2.4
142,770	+				+1.1
142,771	-				+1.9
142,771	-				-2.1
142,836	+				+1.5
142,836	+				+2.9
142,837	-				-2.3
142,837	-				+1.3
142,837	-				+1.1
142,844	+				+2.2
142,844	+				-1.1
142,845	-				+2.6
142,845	-				-0.2
142,896	+				-2.3
142,896	+				-0.7
142,896	+				-1.3
142,897	-				+2.7
142,897	-				-0.2
142,897	-				-4.2
142,912	+				+2.0
142,912	+				-1.3
142,913	-				+1.2
142,923	-				-0.2
142,923	-				-1.8
142,923	-				-0.8
142,923	-				-2.0
142,923	-				-2.0
142,923	-				+0.5
142,923	-				+0.8
142,926	+		IAI47_19570	0.10	-1.2
142,926	+		IAI47_19570	0.10	+0.9
142,926	+		IAI47_19570	0.10	+0.1
142,926	+		IAI47_19570	0.10	-0.4
142,926	+		IAI47_19570	0.10	-0.6
142,926	+		IAI47_19570	0.10	-1.6
142,926	+		IAI47_19570	0.10	-0.7
142,927	-		IAI47_19570	0.10	+1.5
142,927	-		IAI47_19570	0.10	-2.1
142,927	-		IAI47_19570	0.10	-0.2
142,972	+		IAI47_19570	0.13	+1.0
143,033	+		IAI47_19570	0.18	+0.3
143,033	+		IAI47_19570	0.18	+1.5
143,034	-		IAI47_19570	0.18	+4.3
143,080	+		IAI47_19570	0.21	-2.5
143,080	+		IAI47_19570	0.21	+2.9
143,081	-		IAI47_19570	0.21	+0.4
143,081	-		IAI47_19570	0.21	-1.5
143,081	-		IAI47_19570	0.21	-0.9
143,089	+		IAI47_19570	0.22	-2.5
143,113	-		IAI47_19570	0.23	+3.0
143,172	+		IAI47_19570	0.28	+2.2
143,173	-		IAI47_19570	0.28	+0.2
143,173	-		IAI47_19570	0.28	-3.0
143,303	-		IAI47_19570	0.37	-0.5
143,320	-		IAI47_19570	0.38	+2.9
143,360	-		IAI47_19570	0.41	-0.5
143,360	-		IAI47_19570	0.41	-2.2
143,370	+		IAI47_19570	0.42	-1.7
143,371	-		IAI47_19570	0.42	-2.0
143,371	-		IAI47_19570	0.42	-1.1
143,374	+		IAI47_19570	0.42	-2.1
143,374	+		IAI47_19570	0.42	-1.6
143,374	+		IAI47_19570	0.42	+1.6
143,375	-		IAI47_19570	0.42	+2.0
143,388	+		IAI47_19570	0.43	-1.2
143,407	+		IAI47_19570	0.45	+1.9
143,408	-		IAI47_19570	0.45	-1.3
143,408	-		IAI47_19570	0.45	+1.8
143,408	-		IAI47_19570	0.45	-0.9
143,414	+		IAI47_19570	0.45	+1.3
143,414	+		IAI47_19570	0.45	-1.5
143,415	-		IAI47_19570	0.45	-1.5
143,486	+		IAI47_19570	0.50	+2.6
143,521	-		IAI47_19570	0.53	-1.2
143,550	-		IAI47_19570	0.55	+2.0
143,580	+		IAI47_19570	0.57	+1.4
143,581	-		IAI47_19570	0.57	+1.1
143,652	+		IAI47_19570	0.62	-2.6
143,652	+		IAI47_19570	0.62	-0.7
143,653	-		IAI47_19570	0.62	-0.7
143,653	-		IAI47_19570	0.62	+0.1
143,653	-		IAI47_19570	0.62	-2.2
143,653	-		IAI47_19570	0.62	+1.1
143,653	-		IAI47_19570	0.62	+2.1
143,653	-		IAI47_19570	0.62	+3.4
143,667	+		IAI47_19570	0.63	+3.1
143,685	+		IAI47_19570	0.65	+1.9
143,686	-		IAI47_19570	0.65	-0.7
143,704	+		IAI47_19570	0.66	+0.3
143,704	+		IAI47_19570	0.66	-1.6
143,704	+		IAI47_19570	0.66	+3.3
143,704	+		IAI47_19570	0.66	+1.3
143,704	+		IAI47_19570	0.66	-0.2
143,704	+		IAI47_19570	0.66	-0.7
143,704	+		IAI47_19570	0.66	+1.1
143,705	-		IAI47_19570	0.66	+1.8
143,705	-		IAI47_19570	0.66	+2.1
143,705	-		IAI47_19570	0.66	+1.6
143,705	-		IAI47_19570	0.66	-0.7
143,705	-		IAI47_19570	0.66	+2.1
143,705	-		IAI47_19570	0.66	+2.6
143,705	-		IAI47_19570	0.66	+3.2
143,705	-		IAI47_19570	0.66	-0.7
143,705	-		IAI47_19570	0.66	+0.1
143,723	-		IAI47_19570	0.67	-2.1
143,723	-		IAI47_19570	0.67	-0.5
143,723	-		IAI47_19570	0.67	-2.0