Strain Fitness in Pantoea sp. MT58 around IAI47_11245

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,376,467	+		IAI47_11235	0.90	+2.8
2,376,468	-				+2.1
2,376,499	+				-1.6
2,376,499	+				-1.6
2,376,499	+				+0.4
2,376,499	+				-1.3
2,376,500	-				+0.1
2,376,512	+				-0.3
2,376,581	-				-1.3
2,376,581	-				-1.3
2,376,581	-				-2.7
2,376,617	+				+0.1
2,376,628	+				+1.0
2,376,628	+				-1.4
2,376,628	+				-1.4
2,376,628	+				+0.6
2,376,629	-				+1.7
2,376,629	-				+0.3
2,376,633	+				-2.6
2,376,634	-				+0.5
2,376,634	-				-0.3
2,376,638	-				-2.5
2,376,689	-				+2.3
2,376,751	+				+0.7
2,376,751	+				+1.9
2,376,751	+				-0.7
2,376,751	+				-1.3
2,376,752	-				+3.2
2,376,752	-				-1.9
2,376,752	-				+2.7
2,376,752	-				+0.7
2,376,770	+				-0.7
2,376,770	+				-1.7
2,376,770	+				+1.8
2,376,771	-				+1.4
2,376,771	-				-2.7
2,376,782	+				+3.1
2,376,782	+				-0.9
2,376,783	-				-0.3
2,376,803	-		IAI47_11240	0.18	+0.7
2,376,833	+		IAI47_11240	0.31	+3.8
2,376,833	+		IAI47_11240	0.31	-1.3
2,376,833	+		IAI47_11240	0.31	+1.0
2,376,833	+		IAI47_11240	0.31	+2.3
2,376,834	-		IAI47_11240	0.31	-1.4
2,376,884	+		IAI47_11240	0.53	+0.3
2,376,884	+		IAI47_11240	0.53	+1.1
2,376,884	+		IAI47_11240	0.53	+2.3
2,376,884	+		IAI47_11240	0.53	-0.5
2,376,884	+		IAI47_11240	0.53	-0.7
2,376,884	+		IAI47_11240	0.53	+3.2
2,376,885	-		IAI47_11240	0.53	-1.0
2,376,886	+		IAI47_11240	0.54	+0.1
2,376,886	+		IAI47_11240	0.54	-1.1
2,376,886	+		IAI47_11240	0.54	+2.3
2,376,886	+		IAI47_11240	0.54	+2.1
2,376,886	+		IAI47_11240	0.54	-2.1
2,376,886	+		IAI47_11240	0.54	+0.5
2,376,887	-		IAI47_11240	0.54	-0.0
2,376,887	-		IAI47_11240	0.54	-1.3
2,376,905	+		IAI47_11240	0.62	-0.5
2,376,905	-		IAI47_11240	0.62	+1.5
2,376,906	-		IAI47_11240	0.62	-1.1
2,376,906	-		IAI47_11240	0.62	-2.7
2,376,906	-		IAI47_11240	0.62	+0.5
2,376,919	+		IAI47_11240	0.68	+0.5
2,376,919	+		IAI47_11240	0.68	+0.1
2,376,919	+		IAI47_11240	0.68	-1.6
2,376,919	+		IAI47_11240	0.68	+2.0
2,376,919	+		IAI47_11240	0.68	-0.3
2,376,919	+		IAI47_11240	0.68	-0.7
2,376,920	-		IAI47_11240	0.68	+2.7
2,376,923	+		IAI47_11240	0.70	-1.3
2,376,923	+		IAI47_11240	0.70	+1.0
2,376,924	-		IAI47_11240	0.70	+0.5
2,376,924	-		IAI47_11240	0.70	-1.1
2,376,924	-		IAI47_11240	0.70	+0.5
2,376,924	-		IAI47_11240	0.70	+1.7
2,376,924	-		IAI47_11240	0.70	+0.1
2,376,981	-				-1.1
2,376,985	+				+1.8
2,376,985	+				+3.1
2,376,985	+				+1.0
2,376,986	-				+0.9
2,376,992	+				-1.1
2,376,993	-				+2.4
2,377,022	-				+1.2
2,377,069	+				-0.5
2,377,074	-				+0.5
2,377,142	+				+0.1
2,377,142	+				+2.3
2,377,143	-				+0.5
2,377,143	-				-2.8
2,377,143	-				+0.5
2,377,143	-				-1.7
2,377,144	+				+0.1
2,377,145	-				+1.7
2,377,145	-				-0.0
2,377,155	+				-0.0
2,377,156	-				-1.5
2,377,163	+				+0.5
2,377,163	+				-1.1
2,377,163	+				+1.9
2,377,164	-				+0.1
2,377,164	-				+1.8
2,377,164	-				+0.6
2,377,191	+				-1.7
2,377,199	+				-1.6
2,377,223	-				-0.7
2,377,238	+				+1.2
2,377,247	+				+1.6
2,377,292	+				-0.0
2,377,293	-				+2.7
2,377,293	-				+0.5
2,377,309	+				-2.4
2,377,319	+				+1.1
2,377,321	+				-0.5
2,377,321	+				+0.5
2,377,321	+				+2.4
2,377,321	+				-1.5
2,377,322	-				-2.1
2,377,327	+				+0.1
2,377,423	-				-1.3
2,377,432	+				+1.5
2,377,432	+				+2.5
2,377,433	-				+2.0
2,377,433	-				+0.1
2,377,444	+				-1.9
2,377,444	+				-0.3
2,377,444	+				-0.2
2,377,445	-				-0.3
2,377,445	-				-1.8
2,377,445	-				+0.4
2,377,445	-				-1.8
2,377,445	-				+1.8
2,377,445	-				+1.3
2,377,446	+				-0.9
2,377,446	+				-2.3
2,377,446	+				+2.4
2,377,446	+				-1.5
2,377,446	+				-1.7
2,377,446	+				-0.9
2,377,446	+				+2.7
2,377,447	-				-1.8
2,377,447	-				-0.3
2,377,447	-				-0.3
2,377,447	-				+0.3
2,377,447	-				+2.0
2,377,447	-				+2.1
2,377,447	-				+0.3
2,377,465	+				+3.3
2,377,465	+				+0.7
2,377,466	-				-0.2
2,377,466	-				+0.5
2,377,466	-				+2.3
2,377,500	+		IAI47_11245	0.11	+1.0
2,377,500	+		IAI47_11245	0.11	-2.7
2,377,501	-		IAI47_11245	0.11	-0.3
2,377,501	-		IAI47_11245	0.11	+1.3
2,377,501	-		IAI47_11245	0.11	+2.1
2,377,583	+		IAI47_11245	0.19	+0.5
2,377,583	+		IAI47_11245	0.19	-0.2
2,377,685	-		IAI47_11245	0.28	-0.7
2,377,753	+		IAI47_11245	0.34	-1.6
2,377,753	+		IAI47_11245	0.34	+1.7
2,377,754	-		IAI47_11245	0.34	-1.5
2,377,754	-		IAI47_11245	0.34	-2.7
2,377,769	+		IAI47_11245	0.36	+1.3
2,377,796	+		IAI47_11245	0.38	+3.1
2,377,807	+		IAI47_11245	0.39	+2.8
2,377,807	+		IAI47_11245	0.39	+2.3
2,377,808	-		IAI47_11245	0.39	+0.1
2,377,837	-		IAI47_11245	0.42	+0.6
2,377,913	+		IAI47_11245	0.49	-0.3
2,377,914	-		IAI47_11245	0.49	+1.3
2,377,914	-		IAI47_11245	0.49	+0.0
2,377,965	-		IAI47_11245	0.54	-1.7
2,378,008	+		IAI47_11245	0.58	+1.4
2,378,009	-		IAI47_11245	0.58	-0.0
2,378,009	-		IAI47_11245	0.58	-0.7
2,378,009	-		IAI47_11245	0.58	-1.6
2,378,009	-		IAI47_11245	0.58	+0.2
2,378,041	+		IAI47_11245	0.61	+0.3
2,378,041	+		IAI47_11245	0.61	-2.1
2,378,041	+		IAI47_11245	0.61	-1.0
2,378,042	-		IAI47_11245	0.61	-1.3
2,378,042	-		IAI47_11245	0.61	+1.3
2,378,098	+		IAI47_11245	0.66	-1.6
2,378,098	+		IAI47_11245	0.66	+3.1
2,378,168	-		IAI47_11245	0.72	-1.3
2,378,197	+		IAI47_11245	0.75	+0.4
2,378,197	+		IAI47_11245	0.75	-1.4
2,378,197	+		IAI47_11245	0.75	+1.3
2,378,197	+		IAI47_11245	0.75	-2.3
2,378,197	+		IAI47_11245	0.75	-1.5
2,378,197	+		IAI47_11245	0.75	-3.0
2,378,197	+		IAI47_11245	0.75	+1.4
2,378,198	-		IAI47_11245	0.75	-1.0
2,378,198	-		IAI47_11245	0.75	+1.7
2,378,198	-		IAI47_11245	0.75	+3.4
2,378,220	+		IAI47_11245	0.77	-2.1
2,378,263	+		IAI47_11245	0.81	-2.2
2,378,263	+		IAI47_11245	0.81	+1.9
2,378,263	+		IAI47_11245	0.81	+1.9
2,378,263	+		IAI47_11245	0.81	-2.3
2,378,263	+		IAI47_11245	0.81	-1.9
2,378,264	-		IAI47_11245	0.81	-1.4
2,378,264	-		IAI47_11245	0.81	-2.1
2,378,294	-		IAI47_11245	0.84	-0.5
2,378,294	-		IAI47_11245	0.84	-0.6
2,378,323	-		IAI47_11245	0.86	-2.2
2,378,353	+		IAI47_11245	0.89	-2.0
2,378,353	+		IAI47_11245	0.89	-0.4
2,378,353	+		IAI47_11245	0.89	+2.6
2,378,354	-		IAI47_11245	0.89	-1.3
2,378,354	-		IAI47_11245	0.89	-2.6
2,378,409	+				+1.0
2,378,409	+				-0.7
2,378,409	+				+2.1
2,378,409	+				+1.9
2,378,409	+				+0.1
2,378,409	+				-1.3
2,378,410	-				-2.2
2,378,410	-				+1.7
2,378,410	-				+2.8
2,378,441	-				+2.4
2,378,441	-				-0.9
2,378,448	-				-1.8
2,378,468	+				-0.9
2,378,505	+				+0.5
2,378,506	-				-2.7
2,378,532	+				-1.4
2,379,413	-				+2.1