Strain Fitness in Pantoea sp. MT58 around IAI47_09655

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,043,331	-				+1.0
2,043,331	-				+3.8
2,043,455	+		IAI47_09650	0.20	-0.0
2,043,455	+		IAI47_09650	0.20	+2.3
2,043,456	-		IAI47_09650	0.20	-0.1
2,043,456	-		IAI47_09650	0.20	-2.1
2,043,464	+		IAI47_09650	0.21	-2.3
2,043,488	+		IAI47_09650	0.24	+2.1
2,043,489	-		IAI47_09650	0.24	-0.5
2,043,489	-		IAI47_09650	0.24	-3.1
2,043,489	-		IAI47_09650	0.24	-0.8
2,043,505	+		IAI47_09650	0.26	-1.7
2,043,743	+		IAI47_09650	0.52	-0.3
2,043,876	-		IAI47_09650	0.66	+3.5
2,043,884	+		IAI47_09650	0.67	+1.8
2,043,885	-		IAI47_09650	0.67	+1.0
2,043,885	-		IAI47_09650	0.67	+1.6
2,043,885	-		IAI47_09650	0.67	-0.8
2,043,885	-		IAI47_09650	0.67	-1.3
2,043,885	-		IAI47_09650	0.67	-0.5
2,043,921	+		IAI47_09650	0.71	+2.7
2,043,921	+		IAI47_09650	0.71	-1.5
2,043,955	+		IAI47_09650	0.75	+3.9
2,043,955	+		IAI47_09650	0.75	-1.3
2,043,955	+		IAI47_09650	0.75	+2.2
2,043,956	-		IAI47_09650	0.75	+3.0
2,043,956	-		IAI47_09650	0.75	-1.3
2,043,956	-		IAI47_09650	0.75	+1.2
2,043,956	-		IAI47_09650	0.75	-2.1
2,043,977	+		IAI47_09650	0.77	-0.1
2,043,977	+		IAI47_09650	0.77	+0.0
2,043,977	+		IAI47_09650	0.77	-0.5
2,043,977	+		IAI47_09650	0.77	+1.0
2,043,977	+		IAI47_09650	0.77	-2.3
2,043,977	+		IAI47_09650	0.77	+2.0
2,043,978	-		IAI47_09650	0.77	+4.0
2,043,978	-		IAI47_09650	0.77	+1.0
2,043,978	-		IAI47_09650	0.77	-0.8
2,043,978	-		IAI47_09650	0.77	-0.2
2,043,978	-		IAI47_09650	0.77	+1.5
2,044,179	+				+3.3
2,044,179	+				-0.7
2,044,179	+				-0.3
2,044,179	+				+1.7
2,044,180	-				-3.3
2,044,180	-				-2.3
2,044,180	-				+0.0
2,044,180	-				-1.4
2,044,180	-				-0.8
2,044,180	-				-0.5
2,044,208	+				-1.4
2,044,209	-				-1.5
2,044,209	-				+2.9
2,044,209	-				+1.5
2,044,209	-				+0.0
2,044,232	+				-0.8
2,044,233	-				+0.2
2,044,253	-				+0.0
2,044,253	-				-0.8
2,044,253	-				-3.1
2,044,260	+				+0.2
2,044,260	+				+2.4
2,044,260	+				-1.0
2,044,292	+				-0.5
2,044,293	-				+1.2
2,044,303	-				-0.5
2,044,362	-				+1.6
2,044,362	-				-0.8
2,044,457	+				+0.2
2,044,458	-				+4.3
2,044,461	+				+0.9
2,044,461	+				+1.5
2,044,461	+				+4.9
2,044,461	+				+1.0
2,044,462	-				-1.3
2,044,462	-				-1.7
2,044,462	-				+2.5
2,044,501	+		IAI47_09655	0.12	-2.7
2,044,501	+		IAI47_09655	0.12	+2.4
2,044,502	-		IAI47_09655	0.12	+3.0
2,044,502	-		IAI47_09655	0.12	+0.0
2,044,502	-		IAI47_09655	0.12	+1.4
2,044,502	-		IAI47_09655	0.12	-1.3
2,044,506	+		IAI47_09655	0.13	+1.1
2,044,506	+		IAI47_09655	0.13	+1.4
2,044,506	+		IAI47_09655	0.13	+0.6
2,044,506	+		IAI47_09655	0.13	-0.3
2,044,507	-		IAI47_09655	0.13	-0.3
2,044,507	-		IAI47_09655	0.13	-1.3
2,044,507	-		IAI47_09655	0.13	-1.0
2,044,507	-		IAI47_09655	0.13	+1.0
2,044,595	+		IAI47_09655	0.19	+2.4
2,044,596	-		IAI47_09655	0.19	+0.5
2,044,614	+		IAI47_09655	0.20	-0.5
2,044,614	+		IAI47_09655	0.20	+1.2
2,044,648	-		IAI47_09655	0.23	+2.0
2,044,685	+		IAI47_09655	0.25	-1.1
2,044,685	+		IAI47_09655	0.25	+0.0
2,044,685	+		IAI47_09655	0.25	+1.0
2,044,686	-		IAI47_09655	0.25	-0.3
2,044,686	-		IAI47_09655	0.25	-1.0
2,044,780	+		IAI47_09655	0.32	+1.0
2,044,780	+		IAI47_09655	0.32	+3.5
2,044,781	-		IAI47_09655	0.32	-1.0
2,044,864	-		IAI47_09655	0.38	+3.6
2,044,879	+		IAI47_09655	0.39	+4.3
2,044,985	+		IAI47_09655	0.46	+3.4
2,045,073	+		IAI47_09655	0.53	+1.3
2,045,074	-		IAI47_09655	0.53	+1.8
2,045,074	-		IAI47_09655	0.53	+1.9
2,045,074	-		IAI47_09655	0.53	+1.9
2,045,074	-		IAI47_09655	0.53	+2.5
2,045,137	+		IAI47_09655	0.57	+2.5
2,045,137	+		IAI47_09655	0.57	+0.5
2,045,220	-		IAI47_09655	0.63	+1.9
2,045,220	-		IAI47_09655	0.63	+0.2
2,045,485	+		IAI47_09655	0.82	+2.0
2,045,485	+		IAI47_09655	0.82	-2.1
2,045,486	-		IAI47_09655	0.82	-1.9
2,045,486	-		IAI47_09655	0.82	+2.3
2,045,495	-		IAI47_09655	0.82	+1.6
2,045,848	+				+2.0
2,045,848	+				+0.0
2,045,848	+				-1.3
2,045,848	+				-2.0
2,045,848	+				-0.0
2,045,849	-				+0.7
2,045,866	+				+0.0
2,045,866	+				+1.0
2,045,866	+				-1.4
2,045,867	-				+1.2
2,045,867	-				-1.4
2,045,983	+		IAI47_09660	0.19	+1.2
2,045,983	+		IAI47_09660	0.19	-0.5
2,045,983	+		IAI47_09660	0.19	-0.4
2,045,983	+		IAI47_09660	0.19	-1.0
2,045,983	+		IAI47_09660	0.19	-1.8
2,045,984	-		IAI47_09660	0.19	+0.6
2,045,984	-		IAI47_09660	0.19	-2.8
2,045,984	-		IAI47_09660	0.19	+1.0
2,046,057	+		IAI47_09660	0.25	-2.2
2,046,057	+		IAI47_09660	0.25	-1.3
2,046,058	-		IAI47_09660	0.25	+0.4
2,046,058	-		IAI47_09660	0.25	+2.8
2,046,063	+		IAI47_09660	0.25	-1.1
2,046,063	+		IAI47_09660	0.25	+1.6
2,046,064	-		IAI47_09660	0.25	+1.2
2,046,073	+		IAI47_09660	0.26	+2.6
2,046,101	+		IAI47_09660	0.28	-2.0
2,046,101	+		IAI47_09660	0.28	+1.6
2,046,195	+		IAI47_09660	0.36	+1.4
2,046,195	+		IAI47_09660	0.36	+0.3
2,046,196	-		IAI47_09660	0.36	-0.2
2,046,196	-		IAI47_09660	0.36	-0.3
2,046,357	+		IAI47_09660	0.48	-0.7
2,046,361	+		IAI47_09660	0.49	+2.5
2,046,361	+		IAI47_09660	0.49	+0.6
2,046,361	+		IAI47_09660	0.49	+0.5
2,046,361	+		IAI47_09660	0.49	-1.1
2,046,361	+		IAI47_09660	0.49	-0.3
2,046,361	+		IAI47_09660	0.49	+0.5
2,046,361	+		IAI47_09660	0.49	+0.0
2,046,361	+		IAI47_09660	0.49	+0.2
2,046,362	-		IAI47_09660	0.49	+2.1
2,046,362	-		IAI47_09660	0.49	+4.4
2,046,362	-		IAI47_09660	0.49	-2.8
2,046,362	-		IAI47_09660	0.49	+0.6
2,046,362	-		IAI47_09660	0.49	+1.2
2,046,396	+		IAI47_09660	0.51	-0.1
2,046,396	+		IAI47_09660	0.51	-2.0
2,046,397	-		IAI47_09660	0.52	+1.8
2,046,397	-		IAI47_09660	0.52	+1.2
2,046,470	+		IAI47_09660	0.57	+0.0
2,046,502	+		IAI47_09660	0.60	+3.1
2,046,502	+		IAI47_09660	0.60	-2.0
2,046,502	+		IAI47_09660	0.60	+0.1
2,046,502	+		IAI47_09660	0.60	-1.3
2,046,502	+		IAI47_09660	0.60	+0.0
2,046,503	-		IAI47_09660	0.60	+0.1
2,046,503	-		IAI47_09660	0.60	+0.9
2,046,514	+		IAI47_09660	0.61	-1.3
2,046,514	+		IAI47_09660	0.61	+1.9
2,046,514	+		IAI47_09660	0.61	+0.7
2,046,514	+		IAI47_09660	0.61	+1.5
2,046,514	+		IAI47_09660	0.61	+2.6
2,046,514	+		IAI47_09660	0.61	+0.7
2,046,514	+		IAI47_09660	0.61	-1.1
2,046,514	+		IAI47_09660	0.61	-0.5
2,046,515	-		IAI47_09660	0.61	-0.3
2,046,515	-		IAI47_09660	0.61	+1.2
2,046,515	-		IAI47_09660	0.61	+0.2
2,046,515	-		IAI47_09660	0.61	+2.2
2,046,515	-		IAI47_09660	0.61	+1.8
2,046,515	-		IAI47_09660	0.61	-1.1
2,046,515	-		IAI47_09660	0.61	-0.3
2,046,515	-		IAI47_09660	0.61	+2.5
2,046,515	-		IAI47_09660	0.61	+1.7
2,046,515	-		IAI47_09660	0.61	-2.0
2,046,515	-		IAI47_09660	0.61	+0.7
2,046,515	-		IAI47_09660	0.61	-0.3
2,046,515	-		IAI47_09660	0.61	-1.3
2,046,515	-		IAI47_09660	0.61	+2.4
2,046,515	-		IAI47_09660	0.61	+0.0
2,046,518	+		IAI47_09660	0.61	+1.3
2,046,519	-		IAI47_09660	0.61	+1.8
2,046,519	-		IAI47_09660	0.61	-1.4
2,046,526	+		IAI47_09660	0.62	-1.0
2,046,526	+		IAI47_09660	0.62	+0.3
2,046,527	-		IAI47_09660	0.62	-1.1
2,046,674	+		IAI47_09660	0.73	-1.5
2,046,674	+		IAI47_09660	0.73	-0.7
2,046,674	+		IAI47_09660	0.73	+0.8
2,046,675	-		IAI47_09660	0.73	+0.5
2,046,684	+		IAI47_09660	0.74	+2.0
2,046,691	+		IAI47_09660	0.75	+2.3
2,046,691	+		IAI47_09660	0.75	+3.4
2,046,691	+		IAI47_09660	0.75	+3.3
2,046,691	+		IAI47_09660	0.75	-1.0
2,046,691	+		IAI47_09660	0.75	+1.0
2,046,691	+		IAI47_09660	0.75	-0.3
2,046,692	-		IAI47_09660	0.75	+1.6
2,046,692	-		IAI47_09660	0.75	+1.2
2,046,692	-		IAI47_09660	0.75	+1.5
2,046,692	-		IAI47_09660	0.75	-2.1
2,046,703	-		IAI47_09660	0.76	-0.1
2,046,732	+		IAI47_09660	0.78	+0.5
2,046,732	+		IAI47_09660	0.78	+3.0
2,046,732	+		IAI47_09660	0.78	+3.3
2,046,732	+		IAI47_09660	0.78	-0.8
2,046,732	+		IAI47_09660	0.78	-1.0
2,046,732	+		IAI47_09660	0.78	+4.0
2,046,732	+		IAI47_09660	0.78	-1.1
2,046,732	+		IAI47_09660	0.78	-2.5
2,046,733	-		IAI47_09660	0.78	-0.3
2,046,733	-		IAI47_09660	0.78	-1.4
2,046,733	-		IAI47_09660	0.78	+1.9
2,046,733	-		IAI47_09660	0.78	+0.0
2,046,733	-		IAI47_09660	0.78	+1.2
2,046,738	-		IAI47_09660	0.78	+0.8
2,046,738	-		IAI47_09660	0.78	-2.3