Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3932

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
4,046,571	+		Ga0059261_3930	0.85	+0.1
4,046,571	+		Ga0059261_3930	0.85	+0.7
4,046,571	+		Ga0059261_3930	0.85	+3.6
4,046,571	+		Ga0059261_3930	0.85	-0.9
4,046,572	-		Ga0059261_3930	0.85	-1.5
4,046,572	-		Ga0059261_3930	0.85	+0.2
4,046,572	-		Ga0059261_3930	0.85	+0.1
4,046,736	+				+0.4
4,046,736	+				+2.4
4,046,736	+				-1.0
4,046,736	+				+0.1
4,046,737	-				-1.2
4,046,739	+				-0.9
4,046,739	+				+0.2
4,046,739	+				-1.1
4,046,740	-				-0.8
4,046,740	-				-0.4
4,046,740	-				-2.1
4,046,740	-				+1.9
4,046,740	-				-0.0
4,046,740	-				-0.6
4,046,740	-				-1.2
4,046,889	+		Ga0059261_3931	0.26	-0.4
4,046,889	+		Ga0059261_3931	0.26	+0.5
4,046,889	+		Ga0059261_3931	0.26	-0.4
4,046,889	+		Ga0059261_3931	0.26	-2.2
4,046,889	+		Ga0059261_3931	0.26	+0.5
4,046,890	-		Ga0059261_3931	0.26	+0.2
4,046,890	-		Ga0059261_3931	0.26	-0.7
4,046,890	-		Ga0059261_3931	0.26	+1.8
4,046,919	+		Ga0059261_3931	0.29	-0.8
4,046,919	+		Ga0059261_3931	0.29	+0.9
4,046,919	+		Ga0059261_3931	0.29	+1.0
4,046,920	-		Ga0059261_3931	0.29	-1.7
4,046,920	-		Ga0059261_3931	0.29	-2.3
4,046,920	-		Ga0059261_3931	0.29	+1.9
4,047,136	+		Ga0059261_3931	0.53	+0.6
4,047,136	+		Ga0059261_3931	0.53	-0.9
4,047,136	+		Ga0059261_3931	0.53	-0.8
4,047,136	+		Ga0059261_3931	0.53	-0.1
4,047,136	+		Ga0059261_3931	0.53	-1.8
4,047,137	-		Ga0059261_3931	0.53	+1.4
4,047,137	-		Ga0059261_3931	0.53	+3.6
4,047,137	-		Ga0059261_3931	0.53	+2.3
4,047,137	-		Ga0059261_3931	0.53	+1.0
4,047,137	-		Ga0059261_3931	0.53	-0.2
4,047,137	-		Ga0059261_3931	0.53	+0.1
4,047,137	-		Ga0059261_3931	0.53	-1.1
4,047,137	-		Ga0059261_3931	0.53	-0.8
4,047,149	+				+0.2
4,047,149	+		Ga0059261_3931	0.55	+0.9
4,047,149	+		Ga0059261_3931	0.55	+0.1
4,047,149	+		Ga0059261_3931	0.55	-0.6
4,047,149	+		Ga0059261_3931	0.55	+3.7
4,047,149	+		Ga0059261_3931	0.55	+1.2
4,047,149	+		Ga0059261_3931	0.55	-0.1
4,047,149	+		Ga0059261_3931	0.55	+0.3
4,047,150	-		Ga0059261_3931	0.55	+0.1
4,047,150	-		Ga0059261_3931	0.55	+1.7
4,047,150	-		Ga0059261_3931	0.55	+0.7
4,047,150	-		Ga0059261_3931	0.55	-1.1
4,047,150	-		Ga0059261_3931	0.55	+0.2
4,047,150	-		Ga0059261_3931	0.55	-0.7
4,047,150	-				+0.2
4,047,288	+		Ga0059261_3931	0.70	-1.7
4,047,289	-		Ga0059261_3931	0.70	-0.1
4,047,289	-		Ga0059261_3931	0.70	+1.7
4,047,289	-				+1.2
4,047,550	+				+3.5
4,047,551	-				-0.2
4,047,551	-				-1.1
4,047,583	+				-2.1
4,047,642	+				+1.5
4,047,643	-				+1.2
4,047,898	+		Ga0059261_3932	0.35	-0.5
4,047,898	+		Ga0059261_3932	0.35	-0.4
4,047,898	+		Ga0059261_3932	0.35	+1.0
4,047,899	-		Ga0059261_3932	0.35	-0.9
4,047,899	-		Ga0059261_3932	0.35	-1.8
4,047,899	-		Ga0059261_3932	0.35	-2.0
4,047,899	-		Ga0059261_3932	0.35	+1.5
4,047,899	-		Ga0059261_3932	0.35	+0.6
4,047,899	-		Ga0059261_3932	0.35	-2.1
4,048,012	+		Ga0059261_3932	0.46	-1.6
4,048,012	+		Ga0059261_3932	0.46	+0.6
4,048,012	+		Ga0059261_3932	0.46	+1.4
4,048,012	+		Ga0059261_3932	0.46	+0.0
4,048,012	+		Ga0059261_3932	0.46	-0.6
4,048,012	+		Ga0059261_3932	0.46	+0.7
4,048,012	+		Ga0059261_3932	0.46	+1.1
4,048,012	+		Ga0059261_3932	0.46	-0.9
4,048,012	+				+1.8
4,048,012	+		Ga0059261_3932	0.46	+1.6
4,048,012	+		Ga0059261_3932	0.46	+0.6
4,048,013	-		Ga0059261_3932	0.46	-0.3
4,048,013	-		Ga0059261_3932	0.46	-1.8
4,048,013	-		Ga0059261_3932	0.46	+0.4
4,048,013	-		Ga0059261_3932	0.46	-2.0
4,048,013	-		Ga0059261_3932	0.46	+0.6
4,048,023	+		Ga0059261_3932	0.47	+3.7
4,048,023	+		Ga0059261_3932	0.47	+1.2
4,048,024	-		Ga0059261_3932	0.47	+0.4
4,048,054	+		Ga0059261_3932	0.50	+0.9
4,048,054	+		Ga0059261_3932	0.50	-1.5
4,048,055	-		Ga0059261_3932	0.50	+1.5
4,048,055	-		Ga0059261_3932	0.50	-0.7
4,048,072	+		Ga0059261_3932	0.52	+0.9
4,048,073	-		Ga0059261_3932	0.52	-1.2
4,048,162	+		Ga0059261_3932	0.61	+0.5
4,048,162	+		Ga0059261_3932	0.61	-0.9
4,048,162	+		Ga0059261_3932	0.61	+1.5
4,048,163	-		Ga0059261_3932	0.61	+0.4
4,048,163	-		Ga0059261_3932	0.61	-0.6
4,048,294	+		Ga0059261_3932	0.74	+1.8
4,048,294	+		Ga0059261_3932	0.74	-0.2
4,048,295	-		Ga0059261_3932	0.74	-1.5
4,048,306	+		Ga0059261_3932	0.75	+0.7
4,048,307	-		Ga0059261_3932	0.75	+0.9
4,048,334	-		Ga0059261_3932	0.78	-1.3
4,048,334	-		Ga0059261_3932	0.78	+0.6
4,048,334	-		Ga0059261_3932	0.78	-1.2
4,048,399	+		Ga0059261_3932	0.85	+0.2
4,048,400	-		Ga0059261_3932	0.85	+0.9
4,048,400	-		Ga0059261_3932	0.85	+1.2
4,048,575	+				+3.6
4,048,575	+				+0.6
4,048,576	-				-0.1
4,048,576	-				-0.4
4,048,576	-				+2.7
4,048,576	-				+1.6
4,048,576	-				+1.9
4,048,576	-				-0.5
4,048,576	-				+1.8
4,048,688	+		Ga0059261_3933	0.11	+1.2
4,048,688	+		Ga0059261_3933	0.11	-0.4
4,048,688	+		Ga0059261_3933	0.11	+0.4
4,048,688	+		Ga0059261_3933	0.11	-0.4
4,048,688	+		Ga0059261_3933	0.11	-1.0
4,048,688	+		Ga0059261_3933	0.11	-0.7
4,048,688	+		Ga0059261_3933	0.11	+1.8
4,048,688	+		Ga0059261_3933	0.11	-1.1
4,048,689	-		Ga0059261_3933	0.11	-0.4
4,048,689	-		Ga0059261_3933	0.11	+3.3
4,048,689	-		Ga0059261_3933	0.11	-0.6
4,048,689	-		Ga0059261_3933	0.11	+2.2
4,048,689	-		Ga0059261_3933	0.11	-0.6
4,048,911	+		Ga0059261_3933	0.29	-0.5
4,048,911	+		Ga0059261_3933	0.29	+0.4
4,048,911	+		Ga0059261_3933	0.29	+0.6
4,048,912	-		Ga0059261_3933	0.29	-0.9
4,048,912	-		Ga0059261_3933	0.29	+1.1
4,048,912	-		Ga0059261_3933	0.29	-2.1
4,048,912	-		Ga0059261_3933	0.29	-0.4
4,048,912	-		Ga0059261_3933	0.29	+2.0
4,048,912	-		Ga0059261_3933	0.29	-0.1
4,048,912	-		Ga0059261_3933	0.29	-0.9
4,048,912	-		Ga0059261_3933	0.29	-0.9
4,048,912	-		Ga0059261_3933	0.29	-0.1
4,048,912	-		Ga0059261_3933	0.29	+1.4
4,048,912	-		Ga0059261_3933	0.29	-0.1
4,048,932	+		Ga0059261_3933	0.31	-0.1
4,048,932	+		Ga0059261_3933	0.31	+0.5
4,048,933	-		Ga0059261_3933	0.31	+0.2
4,048,951	+		Ga0059261_3933	0.32	-0.3
4,049,098	+		Ga0059261_3933	0.44	+0.1
4,049,544	+		Ga0059261_3933	0.80	+2.2
4,049,544	+		Ga0059261_3933	0.80	+3.0
4,049,545	-		Ga0059261_3933	0.80	-2.2