Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2634

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,726,863	+		Ga0059261_2633	0.38	+0.8
2,727,000	+		Ga0059261_2633	0.49	+1.9
2,727,000	+		Ga0059261_2633	0.49	-0.1
2,727,053	+		Ga0059261_2633	0.53	+1.0
2,727,053	+		Ga0059261_2633	0.53	-3.7
2,727,053	+		Ga0059261_2633	0.53	-1.8
2,727,053	+		Ga0059261_2633	0.53	-0.2
2,727,054	-		Ga0059261_2633	0.53	-1.8
2,727,054	-				+1.4
2,727,054	-		Ga0059261_2633	0.53	-1.6
2,727,054	-		Ga0059261_2633	0.53	+1.4
2,727,183	+		Ga0059261_2633	0.63	-0.2
2,727,183	+		Ga0059261_2633	0.63	+1.9
2,727,183	+		Ga0059261_2633	0.63	-1.0
2,727,184	-		Ga0059261_2633	0.63	+1.4
2,727,184	-		Ga0059261_2633	0.63	+1.0
2,727,184	-		Ga0059261_2633	0.63	-1.9
2,727,184	-		Ga0059261_2633	0.63	+0.6
2,727,184	-		Ga0059261_2633	0.63	-0.6
2,727,214	-		Ga0059261_2633	0.65	-0.2
2,727,235	+		Ga0059261_2633	0.67	+0.2
2,727,235	+		Ga0059261_2633	0.67	-1.0
2,727,235	+		Ga0059261_2633	0.67	-0.9
2,727,235	+		Ga0059261_2633	0.67	+0.9
2,727,236	-		Ga0059261_2633	0.67	-0.6
2,727,236	-		Ga0059261_2633	0.67	-2.0
2,727,236	-		Ga0059261_2633	0.67	+4.7
2,727,236	-		Ga0059261_2633	0.67	-1.0
2,727,236	-		Ga0059261_2633	0.67	+4.8
2,727,318	+		Ga0059261_2633	0.73	+0.2
2,727,318	+		Ga0059261_2633	0.73	-1.8
2,727,318	+		Ga0059261_2633	0.73	-0.5
2,727,393	+		Ga0059261_2633	0.79	+0.2
2,727,394	-		Ga0059261_2633	0.79	+0.4
2,727,447	+		Ga0059261_2633	0.83	-2.9
2,727,447	+		Ga0059261_2633	0.83	+0.0
2,727,447	+		Ga0059261_2633	0.83	+0.8
2,727,447	+		Ga0059261_2633	0.83	-0.3
2,727,447	+		Ga0059261_2633	0.83	+2.0
2,727,447	+		Ga0059261_2633	0.83	-0.6
2,727,447	+		Ga0059261_2633	0.83	-0.5
2,727,447	+		Ga0059261_2633	0.83	-0.2
2,727,447	+		Ga0059261_2633	0.83	-1.9
2,727,448	-		Ga0059261_2633	0.83	+1.2
2,727,448	-		Ga0059261_2633	0.83	+0.6
2,727,448	-		Ga0059261_2633	0.83	-1.3
2,727,448	-		Ga0059261_2633	0.83	-0.4
2,727,448	-		Ga0059261_2633	0.83	-0.2
2,727,594	-				+1.1
2,727,594	-				-0.2
2,727,594	-				-1.5
2,727,594	-				+0.0
2,727,675	-				-1.0
2,727,690	+				-0.3
2,727,956	+		Ga0059261_2634	0.13	-0.7
2,727,956	+		Ga0059261_2634	0.13	-1.2
2,727,956	+		Ga0059261_2634	0.13	+0.1
2,727,956	+		Ga0059261_2634	0.13	-2.0
2,727,956	+				+2.3
2,727,956	+		Ga0059261_2634	0.13	-0.8
2,727,957	-		Ga0059261_2634	0.14	-0.1
2,727,957	-				+1.3
2,727,957	-		Ga0059261_2634	0.14	+0.1
2,728,034	+		Ga0059261_2634	0.19	-1.9
2,728,115	+		Ga0059261_2634	0.25	-1.6
2,728,115	+		Ga0059261_2634	0.25	+0.2
2,728,115	+		Ga0059261_2634	0.25	-4.0
2,728,116	-		Ga0059261_2634	0.25	-2.0
2,728,121	+		Ga0059261_2634	0.25	-0.9
2,728,121	+		Ga0059261_2634	0.25	-0.5
2,728,121	+		Ga0059261_2634	0.25	-0.7
2,728,121	+		Ga0059261_2634	0.25	-0.5
2,728,122	-		Ga0059261_2634	0.26	-0.5
2,728,122	-		Ga0059261_2634	0.26	+2.3
2,728,122	-		Ga0059261_2634	0.26	+2.1
2,728,122	-		Ga0059261_2634	0.26	+0.5
2,728,122	-		Ga0059261_2634	0.26	+0.0
2,728,168	+		Ga0059261_2634	0.29	-1.6
2,728,168	+		Ga0059261_2634	0.29	-1.2
2,728,168	+		Ga0059261_2634	0.29	-0.8
2,728,168	+		Ga0059261_2634	0.29	-1.2
2,728,168	+		Ga0059261_2634	0.29	+0.7
2,728,168	+		Ga0059261_2634	0.29	-1.2
2,728,168	+		Ga0059261_2634	0.29	-0.8
2,728,168	+		Ga0059261_2634	0.29	+3.2
2,728,169	-		Ga0059261_2634	0.29	+0.7
2,728,169	-		Ga0059261_2634	0.29	-0.2
2,728,169	-		Ga0059261_2634	0.29	-1.1
2,728,169	-		Ga0059261_2634	0.29	-2.6
2,728,169	-		Ga0059261_2634	0.29	-1.0
2,728,172	+		Ga0059261_2634	0.29	+1.5
2,728,172	+		Ga0059261_2634	0.29	-0.1
2,728,172	+		Ga0059261_2634	0.29	+0.8
2,728,172	+		Ga0059261_2634	0.29	+0.4
2,728,172	+		Ga0059261_2634	0.29	+2.0
2,728,172	+		Ga0059261_2634	0.29	-2.0
2,728,172	+		Ga0059261_2634	0.29	-2.0
2,728,172	+		Ga0059261_2634	0.29	+2.8
2,728,172	+		Ga0059261_2634	0.29	+1.8
2,728,172	+		Ga0059261_2634	0.29	+0.4
2,728,172	+		Ga0059261_2634	0.29	+1.3
2,728,172	+		Ga0059261_2634	0.29	-0.2
2,728,172	+		Ga0059261_2634	0.29	+0.6
2,728,172	+		Ga0059261_2634	0.29	-0.7
2,728,172	+		Ga0059261_2634	0.29	-1.6
2,728,172	+		Ga0059261_2634	0.29	+1.9
2,728,173	-		Ga0059261_2634	0.29	+0.7
2,728,173	-		Ga0059261_2634	0.29	+0.3
2,728,173	-		Ga0059261_2634	0.29	-1.8
2,728,173	-		Ga0059261_2634	0.29	-1.1
2,728,173	-		Ga0059261_2634	0.29	-1.3
2,728,173	-		Ga0059261_2634	0.29	-0.7
2,728,173	-		Ga0059261_2634	0.29	-0.2
2,728,173	-		Ga0059261_2634	0.29	-0.7
2,728,173	-		Ga0059261_2634	0.29	-1.0
2,728,173	-		Ga0059261_2634	0.29	+3.9
2,728,173	-		Ga0059261_2634	0.29	-0.4
2,728,173	-		Ga0059261_2634	0.29	-1.2
2,728,244	+				+0.8
2,728,244	+		Ga0059261_2634	0.34	-2.0
2,728,244	+		Ga0059261_2634	0.34	-2.0
2,728,244	+		Ga0059261_2634	0.34	+1.6
2,728,244	+		Ga0059261_2634	0.34	-0.5
2,728,244	+		Ga0059261_2634	0.34	-1.1
2,728,244	+		Ga0059261_2634	0.34	-1.2
2,728,244	+		Ga0059261_2634	0.34	+3.7
2,728,244	+		Ga0059261_2634	0.34	+0.3
2,728,244	+		Ga0059261_2634	0.34	+2.2
2,728,244	+		Ga0059261_2634	0.34	-0.2
2,728,245	-		Ga0059261_2634	0.34	+1.5
2,728,245	-		Ga0059261_2634	0.34	-0.3
2,728,245	-		Ga0059261_2634	0.34	-2.4
2,728,481	+		Ga0059261_2634	0.52	-0.9
2,728,481	+		Ga0059261_2634	0.52	-1.1
2,728,481	+		Ga0059261_2634	0.52	-0.8
2,728,482	-		Ga0059261_2634	0.52	-0.7
2,728,482	-		Ga0059261_2634	0.52	+0.2
2,728,482	-		Ga0059261_2634	0.52	+1.2
2,728,526	+		Ga0059261_2634	0.55	+1.3
2,728,526	+		Ga0059261_2634	0.55	-0.5
2,728,527	-		Ga0059261_2634	0.55	-0.2
2,728,527	-		Ga0059261_2634	0.55	-2.1
2,728,527	-		Ga0059261_2634	0.55	+0.2
2,728,527	-		Ga0059261_2634	0.55	-2.7
2,728,586	+		Ga0059261_2634	0.59	+0.5
2,728,586	+		Ga0059261_2634	0.59	-0.1
2,728,587	-		Ga0059261_2634	0.59	-1.2
2,728,587	-		Ga0059261_2634	0.59	-2.1
2,728,587	-		Ga0059261_2634	0.59	+1.5
2,728,587	-		Ga0059261_2634	0.59	-0.8
2,728,587	-		Ga0059261_2634	0.59	-0.6
2,728,594	+		Ga0059261_2634	0.60	+2.1
2,728,594	+		Ga0059261_2634	0.60	-0.9
2,728,595	-		Ga0059261_2634	0.60	-0.2
2,728,655	+		Ga0059261_2634	0.64	-1.5
2,728,655	+		Ga0059261_2634	0.64	+1.9
2,728,655	+		Ga0059261_2634	0.64	+0.9
2,728,655	+		Ga0059261_2634	0.64	-0.5
2,728,655	+		Ga0059261_2634	0.64	-1.2
2,728,656	-		Ga0059261_2634	0.64	+0.8
2,728,656	-		Ga0059261_2634	0.64	-1.8
2,728,656	-		Ga0059261_2634	0.64	+1.5
2,728,656	-		Ga0059261_2634	0.64	+0.2
2,728,697	+		Ga0059261_2634	0.67	-0.8
2,728,697	+		Ga0059261_2634	0.67	+0.1
2,728,697	+		Ga0059261_2634	0.67	-0.5
2,728,697	+		Ga0059261_2634	0.67	+0.7
2,728,697	+		Ga0059261_2634	0.67	+1.3
2,728,697	+		Ga0059261_2634	0.67	+0.7
2,728,697	+		Ga0059261_2634	0.67	+1.1
2,728,697	+		Ga0059261_2634	0.67	+1.6
2,728,698	-		Ga0059261_2634	0.67	-0.9
2,728,698	-		Ga0059261_2634	0.67	-0.7
2,728,698	-		Ga0059261_2634	0.67	-0.2
2,728,698	-		Ga0059261_2634	0.67	+0.0
2,728,698	-		Ga0059261_2634	0.67	+0.1
2,728,698	-		Ga0059261_2634	0.67	+4.0
2,728,698	-		Ga0059261_2634	0.67	-2.0
2,728,698	-		Ga0059261_2634	0.67	+1.9
2,728,698	-		Ga0059261_2634	0.67	+3.5
2,728,698	-		Ga0059261_2634	0.67	+0.5
2,728,828	+		Ga0059261_2634	0.77	+0.3
2,728,828	+		Ga0059261_2634	0.77	-0.6
2,728,828	+		Ga0059261_2634	0.77	-0.4
2,728,829	-		Ga0059261_2634	0.77	+1.3
2,728,829	-		Ga0059261_2634	0.77	-1.0
2,728,829	-		Ga0059261_2634	0.77	-0.9
2,728,901	+		Ga0059261_2634	0.82	+2.3
2,728,902	-				+0.0
2,728,934	+		Ga0059261_2634	0.84	-2.7
2,728,934	+		Ga0059261_2634	0.84	-0.9
2,728,934	+		Ga0059261_2634	0.84	-2.1
2,728,935	-		Ga0059261_2634	0.84	+3.6
2,728,935	-		Ga0059261_2634	0.84	-1.8
2,728,935	-		Ga0059261_2634	0.84	-0.4
2,728,946	+		Ga0059261_2634	0.85	+3.3
2,728,946	+		Ga0059261_2634	0.85	+0.5
2,728,946	+		Ga0059261_2634	0.85	-1.2
2,728,946	+		Ga0059261_2634	0.85	+1.8
2,728,946	+		Ga0059261_2634	0.85	-1.6
2,728,947	-		Ga0059261_2634	0.85	+0.1
2,728,952	+		Ga0059261_2634	0.86	-0.2
2,728,952	+		Ga0059261_2634	0.86	-1.5
2,728,952	+				+0.3
2,728,952	+		Ga0059261_2634	0.86	+1.4
2,728,952	+		Ga0059261_2634	0.86	+1.6
2,728,953	-		Ga0059261_2634	0.86	+1.3
2,728,953	-		Ga0059261_2634	0.86	+1.6
2,728,953	-		Ga0059261_2634	0.86	-0.7
2,728,953	-		Ga0059261_2634	0.86	-0.1
2,728,953	-		Ga0059261_2634	0.86	-0.9
2,728,953	-		Ga0059261_2634	0.86	+3.4
2,728,953	-		Ga0059261_2634	0.86	-1.0
2,728,953	-		Ga0059261_2634	0.86	+1.3
2,728,953	-		Ga0059261_2634	0.86	-0.7
2,728,953	-		Ga0059261_2634	0.86	-0.7
2,728,953	-		Ga0059261_2634	0.86	-1.9
2,728,953	-		Ga0059261_2634	0.86	-1.5
2,728,953	-		Ga0059261_2634	0.86	+1.5
2,728,953	-		Ga0059261_2634	0.86	+0.8
2,728,954	+		Ga0059261_2634	0.86	-0.3
2,729,019	-				+0.8
2,729,019	-				-3.1
2,729,019	-				+2.1
2,729,019	-				-1.4
2,729,185	+				-0.4
2,729,185	+				+0.0
2,729,185	+				-0.2
2,729,185	+				-0.7
2,729,185	+				+0.3
2,729,185	+				+0.1
2,729,185	+				-0.6
2,729,186	-				+0.1
2,729,186	-				+1.5
2,729,186	-				+0.4
2,729,186	-				+1.2
2,729,186	-				+0.4
2,729,197	+				+2.1
2,729,197	+				+0.7
2,729,197	+				-0.6
2,729,198	-				+0.9
2,729,198	-				-0.6
2,729,199	+				-2.6
2,729,199	+				-1.0
2,729,199	+				+0.1
2,729,199	+				-0.8
2,729,200	-				-1.7
2,729,200	-				+1.0
2,729,225	-				-0.3
2,729,225	-				+0.3
2,729,262	+				-0.3
2,729,262	+				-0.7
2,729,263	-				-0.3
2,729,263	-				-0.4
2,729,263	-				-1.2
2,729,293	+		Ga0059261_2635	0.12	+0.3
2,729,464	+		Ga0059261_2635	0.26	-1.3
2,729,464	+		Ga0059261_2635	0.26	-1.6
2,729,464	+		Ga0059261_2635	0.26	-1.6
2,729,464	+		Ga0059261_2635	0.26	+0.4
2,729,465	-		Ga0059261_2635	0.26	-0.5
2,729,488	+		Ga0059261_2635	0.28	-0.8
2,729,503	+		Ga0059261_2635	0.30	-2.9
2,729,503	+		Ga0059261_2635	0.30	+1.7
2,729,503	+		Ga0059261_2635	0.30	+2.5
2,729,503	+		Ga0059261_2635	0.30	-0.2
2,729,503	+		Ga0059261_2635	0.30	+0.4
2,729,503	+		Ga0059261_2635	0.30	+0.9
2,729,503	+		Ga0059261_2635	0.30	+1.0
2,729,503	+		Ga0059261_2635	0.30	-1.6
2,729,503	+		Ga0059261_2635	0.30	-1.3
2,729,504	-		Ga0059261_2635	0.30	+0.5
2,729,506	+		Ga0059261_2635	0.30	-1.1
2,729,506	+		Ga0059261_2635	0.30	-0.2
2,729,506	+		Ga0059261_2635	0.30	+0.3
2,729,507	-		Ga0059261_2635	0.30	+0.0
2,729,507	-		Ga0059261_2635	0.30	-1.1
2,729,507	-		Ga0059261_2635	0.30	-2.5
2,729,507	-		Ga0059261_2635	0.30	-2.6
2,729,507	-		Ga0059261_2635	0.30	-0.8
2,729,596	+		Ga0059261_2635	0.37	-0.5
2,729,596	+		Ga0059261_2635	0.37	-1.9
2,729,596	+		Ga0059261_2635	0.37	+0.9
2,729,597	-		Ga0059261_2635	0.37	-0.4
2,729,597	-		Ga0059261_2635	0.37	-1.7
2,729,597	-		Ga0059261_2635	0.37	+1.4
2,729,597	-		Ga0059261_2635	0.37	+3.3
2,729,638	+				+1.4
2,729,638	+				+0.8
2,729,638	+		Ga0059261_2635	0.41	+1.3
2,729,639	-		Ga0059261_2635	0.41	+1.2
2,729,639	-		Ga0059261_2635	0.41	-0.8
2,729,800	+		Ga0059261_2635	0.54	+1.7
2,729,800	+		Ga0059261_2635	0.54	-0.5
2,729,800	+		Ga0059261_2635	0.54	-0.7
2,729,800	+		Ga0059261_2635	0.54	-2.5
2,729,800	+		Ga0059261_2635	0.54	+3.5
2,729,800	+		Ga0059261_2635	0.54	-2.0
2,729,800	+		Ga0059261_2635	0.54	+0.8
2,729,800	+		Ga0059261_2635	0.54	-1.7
2,729,800	+		Ga0059261_2635	0.54	-0.1
2,729,800	+		Ga0059261_2635	0.54	+0.2
2,729,800	+		Ga0059261_2635	0.54	+0.3
2,729,801	-		Ga0059261_2635	0.54	-0.8
2,729,801	-		Ga0059261_2635	0.54	-0.7
2,729,801	-		Ga0059261_2635	0.54	+1.4
2,729,801	-		Ga0059261_2635	0.54	+0.9
2,729,801	-		Ga0059261_2635	0.54	-2.2
2,729,830	+		Ga0059261_2635	0.57	-0.3
2,729,830	+		Ga0059261_2635	0.57	-0.2
2,729,830	+		Ga0059261_2635	0.57	-0.9
2,729,830	+		Ga0059261_2635	0.57	+1.4
2,729,830	+		Ga0059261_2635	0.57	-0.5
2,729,831	-		Ga0059261_2635	0.57	-3.0
2,729,831	-		Ga0059261_2635	0.57	-0.7
2,729,831	-		Ga0059261_2635	0.57	+2.6
2,729,831	-		Ga0059261_2635	0.57	-1.2
2,729,831	-		Ga0059261_2635	0.57	-0.7
2,729,908	+		Ga0059261_2635	0.63	+0.0
2,729,909	-		Ga0059261_2635	0.63	-1.0
2,729,909	-		Ga0059261_2635	0.63	+0.1
2,729,909	-		Ga0059261_2635	0.63	-0.8
2,729,909	-		Ga0059261_2635	0.63	-0.2
2,729,917	+		Ga0059261_2635	0.64	+0.4
2,729,918	-		Ga0059261_2635	0.64	+1.4
2,729,918	-		Ga0059261_2635	0.64	-0.6
2,730,133	+		Ga0059261_2635	0.82	+1.4
2,730,133	+		Ga0059261_2635	0.82	-1.5
2,730,133	+		Ga0059261_2635	0.82	+0.4
2,730,133	+		Ga0059261_2635	0.82	-2.0
2,730,133	+		Ga0059261_2635	0.82	-2.6
2,730,133	+		Ga0059261_2635	0.82	+0.0
2,730,133	+				+2.4
2,730,134	-		Ga0059261_2635	0.82	-1.9
2,730,134	-		Ga0059261_2635	0.82	+0.5
2,730,134	-		Ga0059261_2635	0.82	-0.2
2,730,134	-		Ga0059261_2635	0.82	+0.3
2,730,134	-		Ga0059261_2635	0.82	-2.2
2,730,134	-		Ga0059261_2635	0.82	-0.3
2,730,134	-		Ga0059261_2635	0.82	-0.1
2,730,134	-		Ga0059261_2635	0.82	-1.2
2,730,134	-		Ga0059261_2635	0.82	+0.3
2,730,139	+		Ga0059261_2635	0.82	-0.2
2,730,139	+		Ga0059261_2635	0.82	+0.4
2,730,139	+				+0.8
2,730,139	+		Ga0059261_2635	0.82	+0.6
2,730,139	+		Ga0059261_2635	0.82	+0.1
2,730,140	-		Ga0059261_2635	0.82	+0.3
2,730,140	-		Ga0059261_2635	0.82	+1.0
2,730,140	-		Ga0059261_2635	0.82	+0.2
2,730,140	-		Ga0059261_2635	0.82	-0.9
2,730,140	-		Ga0059261_2635	0.82	-2.3
2,730,140	-		Ga0059261_2635	0.82	-0.8
2,730,140	-		Ga0059261_2635	0.82	-1.5
2,730,140	-		Ga0059261_2635	0.82	+3.1