Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2159

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,270,148	+		Ga0059261_2157	0.61	+0.2
2,270,148	+		Ga0059261_2157	0.61	-2.7
2,270,148	+		Ga0059261_2157	0.61	+0.7
2,270,149	-		Ga0059261_2157	0.61	+1.1
2,270,149	-		Ga0059261_2157	0.61	+0.6
2,270,251	-		Ga0059261_2157	0.73	-1.5
2,270,251	-		Ga0059261_2157	0.73	+0.9
2,270,251	-		Ga0059261_2157	0.73	-2.9
2,270,369	+		Ga0059261_2157	0.87	+1.1
2,270,370	-		Ga0059261_2157	0.87	+3.0
2,270,370	-		Ga0059261_2157	0.87	+0.6
2,270,413	+				-0.4
2,270,414	-				+1.0
2,270,414	-				-0.1
2,270,440	+				+3.0
2,270,441	-				-1.8
2,270,441	-				+2.6
2,270,447	+				+0.4
2,270,447	+				-2.1
2,270,486	+				-1.5
2,270,487	-				-0.1
2,270,487	-				+0.3
2,270,531	+				+1.6
2,270,531	+				+1.0
2,270,531	+				-0.0
2,270,531	+				-0.5
2,270,532	-				+1.8
2,270,532	-				+3.0
2,270,532	-				+0.7
2,270,532	-				-0.0
2,270,532	-				+0.4
2,270,566	+				-2.0
2,270,650	-				+1.2
2,270,650	-				-0.3
2,270,650	-				+5.5
2,270,743	+		Ga0059261_2158	0.21	-0.7
2,270,743	+		Ga0059261_2158	0.21	-0.9
2,270,758	+		Ga0059261_2158	0.25	+1.6
2,270,758	+		Ga0059261_2158	0.25	-0.9
2,270,758	+		Ga0059261_2158	0.25	-0.5
2,270,758	+		Ga0059261_2158	0.25	+1.6
2,270,758	+		Ga0059261_2158	0.25	-1.3
2,270,759	-		Ga0059261_2158	0.25	-2.1
2,270,759	-		Ga0059261_2158	0.25	-2.0
2,270,799	+		Ga0059261_2158	0.34	+0.2
2,270,799	+		Ga0059261_2158	0.34	+1.2
2,270,799	+		Ga0059261_2158	0.34	+1.5
2,270,799	+		Ga0059261_2158	0.34	-0.0
2,270,799	+		Ga0059261_2158	0.34	-0.3
2,270,799	+				+0.8
2,270,800	-		Ga0059261_2158	0.34	-0.8
2,270,800	-		Ga0059261_2158	0.34	-0.0
2,270,800	-		Ga0059261_2158	0.34	+0.4
2,270,800	-		Ga0059261_2158	0.34	-0.4
2,270,800	-		Ga0059261_2158	0.34	-1.0
2,270,869	-		Ga0059261_2158	0.49	-0.6
2,270,869	-		Ga0059261_2158	0.49	-1.5
2,270,911	+		Ga0059261_2158	0.58	-2.0
2,270,912	-		Ga0059261_2158	0.58	-1.2
2,271,014	+		Ga0059261_2158	0.80	-0.3
2,271,014	+		Ga0059261_2158	0.80	+1.3
2,271,014	+		Ga0059261_2158	0.80	-0.8
2,271,014	+		Ga0059261_2158	0.80	+1.7
2,271,014	+		Ga0059261_2158	0.80	+1.4
2,271,014	+		Ga0059261_2158	0.80	-0.9
2,271,014	+		Ga0059261_2158	0.80	-2.0
2,271,015	-		Ga0059261_2158	0.80	-0.6
2,271,015	-		Ga0059261_2158	0.80	+0.9
2,271,015	-		Ga0059261_2158	0.80	-1.0
2,271,015	-		Ga0059261_2158	0.80	+0.4
2,271,103	+				+3.4
2,271,103	+				+0.4
2,271,104	-				-0.9
2,271,104	-				+0.9
2,271,129	+				+0.6
2,271,129	+				-1.3
2,271,129	+				-1.4
2,271,129	+				-0.6
2,271,129	+				+1.2
2,271,130	-				+1.2
2,271,130	-				+1.9
2,271,130	-				-0.4
2,271,130	-				-1.0
2,271,130	-				-1.8
2,271,331	+		Ga0059261_2159	0.25	-0.2
2,271,331	+		Ga0059261_2159	0.25	+0.2
2,271,332	-		Ga0059261_2159	0.25	-1.4
2,271,332	-		Ga0059261_2159	0.25	-1.1
2,271,427	+		Ga0059261_2159	0.37	-0.6
2,271,427	+		Ga0059261_2159	0.37	-0.9
2,271,427	+		Ga0059261_2159	0.37	+1.1
2,271,427	+		Ga0059261_2159	0.37	-0.2
2,271,427	+		Ga0059261_2159	0.37	+0.2
2,271,427	+		Ga0059261_2159	0.37	+0.3
2,271,428	-		Ga0059261_2159	0.37	-0.2
2,271,428	-		Ga0059261_2159	0.37	-1.2
2,271,428	-		Ga0059261_2159	0.37	+1.4
2,271,428	-				+0.8
2,271,428	-		Ga0059261_2159	0.37	+1.5
2,271,428	-		Ga0059261_2159	0.37	+0.1
2,271,604	-		Ga0059261_2159	0.60	+0.3
2,271,632	+		Ga0059261_2159	0.63	-1.5
2,271,632	+		Ga0059261_2159	0.63	-0.3
2,271,633	-		Ga0059261_2159	0.63	+1.0
2,271,633	-		Ga0059261_2159	0.63	+1.4
2,271,633	-		Ga0059261_2159	0.63	-0.2
2,271,633	-		Ga0059261_2159	0.63	+0.8
2,271,633	-		Ga0059261_2159	0.63	-0.9
2,271,633	-		Ga0059261_2159	0.63	-0.5
2,271,704	+		Ga0059261_2159	0.73	+2.4
2,271,704	+		Ga0059261_2159	0.73	-0.2
2,271,704	+		Ga0059261_2159	0.73	-2.1
2,271,705	-		Ga0059261_2159	0.73	+0.1
2,271,947	-				-1.6
2,271,968	+				+4.3
2,271,968	+				-0.2
2,272,036	+				+3.8
2,272,036	+				+1.4
2,272,053	+				+0.3
2,272,053	+				+1.7
2,272,053	+				-0.7
2,272,053	+				+1.8
2,272,053	+				+0.4
2,272,053	+				+0.5
2,272,053	+				+0.8
2,272,053	+				+0.1
2,272,054	-				+4.0
2,272,054	-				+0.8
2,272,054	-				-0.6
2,272,054	-				+1.2
2,272,054	-				+1.1
2,272,054	-				+0.7
2,272,054	-				-0.2
2,272,054	-				-1.1
2,272,054	-				-0.1
2,272,414	+		Ga0059261_2160	0.36	-0.6
2,272,414	+		Ga0059261_2160	0.36	+0.7
2,272,414	+		Ga0059261_2160	0.36	-0.0
2,272,414	+		Ga0059261_2160	0.36	+2.4
2,272,414	+		Ga0059261_2160	0.36	+0.5
2,272,414	+		Ga0059261_2160	0.36	-1.4
2,272,414	+		Ga0059261_2160	0.36	-2.1
2,272,414	+		Ga0059261_2160	0.36	-0.4
2,272,414	+		Ga0059261_2160	0.36	-0.4
2,272,414	+		Ga0059261_2160	0.36	+1.4
2,272,414	+		Ga0059261_2160	0.36	-0.0
2,272,414	+		Ga0059261_2160	0.36	+1.4
2,272,414	+		Ga0059261_2160	0.36	+0.8
2,272,414	+		Ga0059261_2160	0.36	+0.2
2,272,414	+		Ga0059261_2160	0.36	+1.0
2,272,414	+		Ga0059261_2160	0.36	-1.5
2,272,414	+		Ga0059261_2160	0.36	-0.5
2,272,414	+		Ga0059261_2160	0.36	-2.1
2,272,415	-		Ga0059261_2160	0.36	-0.6
2,272,415	-		Ga0059261_2160	0.36	+0.4
2,272,415	-		Ga0059261_2160	0.36	-0.9
2,272,415	-		Ga0059261_2160	0.36	-0.4
2,272,415	-		Ga0059261_2160	0.36	+3.6
2,272,415	-				+0.1
2,272,415	-		Ga0059261_2160	0.36	+0.0
2,272,415	-		Ga0059261_2160	0.36	+0.6
2,272,415	-		Ga0059261_2160	0.36	-0.2
2,272,415	-		Ga0059261_2160	0.36	-0.6
2,272,415	-		Ga0059261_2160	0.36	+1.4
2,272,415	-		Ga0059261_2160	0.36	-2.1
2,272,415	-				+4.0
2,272,415	-		Ga0059261_2160	0.36	+1.1
2,272,415	-		Ga0059261_2160	0.36	+0.7
2,272,415	-		Ga0059261_2160	0.36	+1.7
2,272,415	-		Ga0059261_2160	0.36	-0.7
2,272,415	-		Ga0059261_2160	0.36	-0.9
2,272,415	-		Ga0059261_2160	0.36	-0.1
2,272,415	-		Ga0059261_2160	0.36	+0.4
2,272,415	-		Ga0059261_2160	0.36	+2.6
2,272,415	-		Ga0059261_2160	0.36	-1.2
2,272,415	-		Ga0059261_2160	0.36	+0.4
2,272,415	-		Ga0059261_2160	0.36	-1.1
2,272,416	+		Ga0059261_2160	0.36	+0.2
2,272,416	+		Ga0059261_2160	0.36	+0.0
2,272,416	+		Ga0059261_2160	0.36	-0.5
2,272,416	+		Ga0059261_2160	0.36	-1.2
2,272,416	+		Ga0059261_2160	0.36	-2.2
2,272,416	+		Ga0059261_2160	0.36	+1.7
2,272,416	+		Ga0059261_2160	0.36	+1.1
2,272,416	+		Ga0059261_2160	0.36	-1.2
2,272,416	+		Ga0059261_2160	0.36	-1.8
2,272,416	+		Ga0059261_2160	0.36	-0.3
2,272,416	+		Ga0059261_2160	0.36	+0.4
2,272,416	+		Ga0059261_2160	0.36	-0.2
2,272,416	+		Ga0059261_2160	0.36	-1.4
2,272,416	+		Ga0059261_2160	0.36	-0.8
2,272,416	+		Ga0059261_2160	0.36	-0.9
2,272,416	+		Ga0059261_2160	0.36	-2.1
2,272,416	+		Ga0059261_2160	0.36	+1.5
2,272,416	+		Ga0059261_2160	0.36	+0.8
2,272,416	+		Ga0059261_2160	0.36	+0.2
2,272,416	+		Ga0059261_2160	0.36	+1.4
2,272,416	+		Ga0059261_2160	0.36	-1.7
2,272,416	+		Ga0059261_2160	0.36	+0.1
2,272,417	-		Ga0059261_2160	0.36	-0.1
2,272,417	-		Ga0059261_2160	0.36	-2.5
2,272,417	-		Ga0059261_2160	0.36	-0.5
2,272,417	-		Ga0059261_2160	0.36	-0.4
2,272,417	-		Ga0059261_2160	0.36	+1.1
2,272,417	-		Ga0059261_2160	0.36	-1.2
2,272,417	-		Ga0059261_2160	0.36	+0.7
2,272,417	-		Ga0059261_2160	0.36	+0.9
2,272,417	-		Ga0059261_2160	0.36	-0.6
2,272,417	-		Ga0059261_2160	0.36	-0.1
2,272,417	-				+0.4
2,272,417	-		Ga0059261_2160	0.36	+1.0
2,272,417	-		Ga0059261_2160	0.36	-0.4
2,272,417	-		Ga0059261_2160	0.36	-0.2
2,272,417	-		Ga0059261_2160	0.36	+0.4
2,272,417	-		Ga0059261_2160	0.36	-0.2
2,272,417	-		Ga0059261_2160	0.36	-0.6
2,272,417	-		Ga0059261_2160	0.36	-1.4
2,272,417	-		Ga0059261_2160	0.36	+0.7
2,272,456	+		Ga0059261_2160	0.39	-0.3
2,272,456	+		Ga0059261_2160	0.39	+1.8
2,272,457	-		Ga0059261_2160	0.39	-1.8
2,272,457	-		Ga0059261_2160	0.39	+2.6
2,272,457	-				+1.4
2,272,486	+		Ga0059261_2160	0.42	-0.2
2,272,486	+		Ga0059261_2160	0.42	-2.0
2,272,486	+		Ga0059261_2160	0.42	-0.8
2,272,486	+		Ga0059261_2160	0.42	-2.7
2,272,486	+		Ga0059261_2160	0.42	-0.2
2,272,487	-				+1.4
2,272,487	-		Ga0059261_2160	0.42	-0.4
2,272,487	-		Ga0059261_2160	0.42	-1.5
2,272,487	-		Ga0059261_2160	0.42	-0.6
2,272,487	-		Ga0059261_2160	0.42	-0.5
2,272,487	-		Ga0059261_2160	0.42	+0.8
2,272,651	-		Ga0059261_2160	0.56	+0.0
2,272,823	+		Ga0059261_2160	0.70	+0.4
2,272,825	+		Ga0059261_2160	0.70	+2.2
2,272,825	+		Ga0059261_2160	0.70	-1.8
2,272,825	+		Ga0059261_2160	0.70	-0.8
2,272,825	+		Ga0059261_2160	0.70	+2.5
2,272,825	+		Ga0059261_2160	0.70	-2.1
2,272,825	+		Ga0059261_2160	0.70	-0.6
2,272,825	+		Ga0059261_2160	0.70	-0.8
2,272,825	+		Ga0059261_2160	0.70	+0.7
2,272,825	+		Ga0059261_2160	0.70	+1.3
2,272,826	-		Ga0059261_2160	0.70	-1.2
2,272,826	-		Ga0059261_2160	0.70	+0.7
2,272,826	-		Ga0059261_2160	0.70	+2.4
2,272,826	-		Ga0059261_2160	0.70	+0.2
2,272,826	-		Ga0059261_2160	0.70	-0.6
2,272,826	-		Ga0059261_2160	0.70	-0.8
2,272,826	-		Ga0059261_2160	0.70	+0.8
2,272,826	-		Ga0059261_2160	0.70	-0.6
2,272,826	-		Ga0059261_2160	0.70	+0.7
2,272,826	-		Ga0059261_2160	0.70	+0.4
2,272,826	-		Ga0059261_2160	0.70	-1.0