Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2047

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,150,040	+		Ga0059261_2046	0.61	+0.0
2,150,040	+		Ga0059261_2046	0.61	-0.9
2,150,040	+		Ga0059261_2046	0.61	+0.4
2,150,040	+		Ga0059261_2046	0.61	+0.1
2,150,040	+		Ga0059261_2046	0.61	-1.6
2,150,040	+		Ga0059261_2046	0.61	-1.5
2,150,040	+		Ga0059261_2046	0.61	+0.9
2,150,040	+		Ga0059261_2046	0.61	+2.4
2,150,040	+		Ga0059261_2046	0.61	+0.2
2,150,040	+		Ga0059261_2046	0.61	+1.4
2,150,040	+		Ga0059261_2046	0.61	+0.1
2,150,041	-		Ga0059261_2046	0.61	+0.1
2,150,041	-		Ga0059261_2046	0.61	-2.9
2,150,041	-		Ga0059261_2046	0.61	+1.7
2,150,041	-		Ga0059261_2046	0.61	+3.7
2,150,041	-		Ga0059261_2046	0.61	-0.3
2,150,061	+		Ga0059261_2046	0.62	+1.1
2,150,061	+		Ga0059261_2046	0.62	+1.7
2,150,061	+		Ga0059261_2046	0.62	+0.4
2,150,061	+		Ga0059261_2046	0.62	+0.7
2,150,062	-		Ga0059261_2046	0.62	-0.2
2,150,062	-		Ga0059261_2046	0.62	-1.3
2,150,062	-		Ga0059261_2046	0.62	-0.8
2,150,206	+		Ga0059261_2046	0.69	-0.5
2,150,206	+		Ga0059261_2046	0.69	-0.4
2,150,206	+		Ga0059261_2046	0.69	+0.4
2,150,206	+		Ga0059261_2046	0.69	-0.0
2,150,206	+		Ga0059261_2046	0.69	-1.6
2,150,207	-		Ga0059261_2046	0.69	-0.2
2,150,207	-		Ga0059261_2046	0.69	+0.3
2,150,207	-		Ga0059261_2046	0.69	-0.4
2,150,207	-		Ga0059261_2046	0.69	+0.1
2,150,207	-		Ga0059261_2046	0.69	-0.7
2,150,207	-		Ga0059261_2046	0.69	+4.1
2,150,207	-		Ga0059261_2046	0.69	-0.1
2,150,207	-		Ga0059261_2046	0.69	-1.0
2,150,207	-		Ga0059261_2046	0.69	+0.7
2,150,207	-		Ga0059261_2046	0.69	+0.8
2,150,208	+		Ga0059261_2046	0.69	-1.3
2,150,208	+		Ga0059261_2046	0.69	+1.0
2,150,208	+		Ga0059261_2046	0.69	-1.5
2,150,208	+		Ga0059261_2046	0.69	-0.0
2,150,209	-		Ga0059261_2046	0.69	+0.1
2,150,209	-		Ga0059261_2046	0.69	+0.4
2,150,209	-				+0.8
2,150,209	-		Ga0059261_2046	0.69	+2.0
2,150,209	-				+2.4
2,150,209	-		Ga0059261_2046	0.69	-0.1
2,150,209	-		Ga0059261_2046	0.69	-0.2
2,150,209	-		Ga0059261_2046	0.69	-2.1
2,150,209	-		Ga0059261_2046	0.69	+1.4
2,150,256	+		Ga0059261_2046	0.71	-1.8
2,150,256	+		Ga0059261_2046	0.71	-0.3
2,150,256	+				+1.4
2,150,257	-		Ga0059261_2046	0.71	-2.7
2,150,257	-		Ga0059261_2046	0.71	+0.3
2,150,257	-		Ga0059261_2046	0.71	+1.3
2,150,257	-				+0.8
2,150,257	-		Ga0059261_2046	0.71	+1.1
2,150,306	+		Ga0059261_2046	0.73	+0.7
2,150,306	+		Ga0059261_2046	0.73	-0.1
2,150,306	+		Ga0059261_2046	0.73	+1.7
2,150,306	+		Ga0059261_2046	0.73	+0.8
2,150,307	-		Ga0059261_2046	0.73	-1.8
2,150,307	-		Ga0059261_2046	0.73	+0.2
2,150,307	-		Ga0059261_2046	0.73	+0.8
2,150,307	-		Ga0059261_2046	0.73	-0.0
2,150,334	+		Ga0059261_2046	0.75	-0.6
2,150,334	+		Ga0059261_2046	0.75	-2.7
2,150,334	+		Ga0059261_2046	0.75	+1.8
2,150,334	+		Ga0059261_2046	0.75	+1.0
2,150,335	-		Ga0059261_2046	0.75	+0.2
2,150,335	-		Ga0059261_2046	0.75	-0.7
2,150,335	-				+1.4
2,150,335	-		Ga0059261_2046	0.75	-0.4
2,150,335	-		Ga0059261_2046	0.75	+1.8
2,150,335	-		Ga0059261_2046	0.75	-1.3
2,150,343	+		Ga0059261_2046	0.75	-0.1
2,150,343	+		Ga0059261_2046	0.75	+1.0
2,150,343	+		Ga0059261_2046	0.75	-0.4
2,150,344	-				+0.8
2,150,344	-		Ga0059261_2046	0.75	-0.8
2,150,344	-		Ga0059261_2046	0.75	+0.1
2,150,367	+		Ga0059261_2046	0.76	+1.1
2,150,367	+		Ga0059261_2046	0.76	-0.9
2,150,367	+		Ga0059261_2046	0.76	-2.5
2,150,367	+		Ga0059261_2046	0.76	+0.3
2,150,367	+		Ga0059261_2046	0.76	-0.7
2,150,367	+		Ga0059261_2046	0.76	+4.8
2,150,367	+		Ga0059261_2046	0.76	+1.1
2,150,367	+		Ga0059261_2046	0.76	+2.7
2,150,367	+		Ga0059261_2046	0.76	+2.1
2,150,367	+		Ga0059261_2046	0.76	-0.2
2,150,368	-		Ga0059261_2046	0.76	-0.8
2,150,368	-		Ga0059261_2046	0.76	-2.0
2,150,368	-		Ga0059261_2046	0.76	+1.3
2,150,368	-		Ga0059261_2046	0.76	-1.0
2,150,368	-		Ga0059261_2046	0.76	-0.2
2,150,368	-		Ga0059261_2046	0.76	+1.7
2,150,368	-		Ga0059261_2046	0.76	-0.4
2,150,368	-		Ga0059261_2046	0.76	+1.4
2,150,368	-		Ga0059261_2046	0.76	-0.2
2,150,368	-		Ga0059261_2046	0.76	-0.2
2,150,368	-		Ga0059261_2046	0.76	+2.3
2,150,368	-		Ga0059261_2046	0.76	-1.0
2,150,394	+		Ga0059261_2046	0.77	-1.8
2,150,394	+		Ga0059261_2046	0.77	-0.6
2,150,394	+		Ga0059261_2046	0.77	+1.2
2,150,394	+		Ga0059261_2046	0.77	-0.8
2,150,394	+		Ga0059261_2046	0.77	-2.2
2,150,394	+		Ga0059261_2046	0.77	-1.1
2,150,395	-		Ga0059261_2046	0.77	-1.5
2,150,395	-		Ga0059261_2046	0.77	-2.6
2,150,395	-		Ga0059261_2046	0.77	+0.2
2,150,395	-		Ga0059261_2046	0.77	+2.2
2,150,395	-		Ga0059261_2046	0.77	+0.9
2,150,427	+		Ga0059261_2046	0.79	-0.6
2,150,428	-		Ga0059261_2046	0.79	+2.4
2,150,428	-		Ga0059261_2046	0.79	-0.0
2,150,428	-		Ga0059261_2046	0.79	-0.2
2,150,428	-		Ga0059261_2046	0.79	-0.8
2,150,511	+		Ga0059261_2046	0.82	-0.1
2,150,511	+		Ga0059261_2046	0.82	+1.4
2,150,511	+		Ga0059261_2046	0.82	+0.5
2,150,511	+		Ga0059261_2046	0.82	-1.1
2,150,511	+		Ga0059261_2046	0.82	+0.1
2,150,511	+		Ga0059261_2046	0.82	-0.3
2,150,511	+		Ga0059261_2046	0.82	+0.3
2,150,511	+		Ga0059261_2046	0.82	+1.5
2,150,512	-		Ga0059261_2046	0.82	-2.2
2,150,512	-		Ga0059261_2046	0.82	+1.7
2,150,512	-				+2.4
2,150,512	-		Ga0059261_2046	0.82	+1.5
2,150,512	-		Ga0059261_2046	0.82	-0.5
2,150,512	-		Ga0059261_2046	0.82	-0.2
2,150,512	-		Ga0059261_2046	0.82	-1.4
2,150,512	-		Ga0059261_2046	0.82	+0.1
2,150,512	-		Ga0059261_2046	0.82	+0.2
2,150,512	-		Ga0059261_2046	0.82	-0.6
2,150,512	-		Ga0059261_2046	0.82	+0.1
2,150,525	-		Ga0059261_2046	0.83	+0.1
2,150,525	-		Ga0059261_2046	0.83	+0.4
2,150,525	-		Ga0059261_2046	0.83	-0.6
2,150,526	+		Ga0059261_2046	0.83	-0.6
2,150,526	+		Ga0059261_2046	0.83	+0.9
2,150,526	+		Ga0059261_2046	0.83	+0.1
2,150,526	+		Ga0059261_2046	0.83	+0.1
2,150,526	+		Ga0059261_2046	0.83	-0.9
2,150,527	-		Ga0059261_2046	0.83	+3.1
2,150,527	-		Ga0059261_2046	0.83	-0.5
2,150,527	-		Ga0059261_2046	0.83	-1.4
2,150,527	-		Ga0059261_2046	0.83	-0.6
2,150,527	-		Ga0059261_2046	0.83	+0.3
2,150,527	-				+4.0
2,150,897	+				-1.6
2,150,898	-				+4.0
2,150,948	+				+0.8
2,150,948	+				+0.4
2,150,948	+				+0.5
2,150,948	+				+0.1
2,150,948	+				-0.6
2,150,948	+				+0.2
2,150,948	+				-0.2
2,150,948	+				-0.2
2,150,948	+				+1.8
2,150,948	+				+0.2
2,150,949	-				+1.3
2,150,949	-				-0.8
2,150,949	-				-0.3
2,150,949	-				+0.1
2,150,966	+				-0.8
2,150,967	-				-0.2
2,151,232	+		Ga0059261_2047	0.33	+1.9
2,151,232	+		Ga0059261_2047	0.33	+1.2
2,151,232	+		Ga0059261_2047	0.33	+0.8
2,151,232	+		Ga0059261_2047	0.33	-0.4
2,151,232	+		Ga0059261_2047	0.33	+0.4
2,151,232	+		Ga0059261_2047	0.33	-0.4
2,151,232	+		Ga0059261_2047	0.33	-0.2
2,151,232	+		Ga0059261_2047	0.33	-3.3
2,151,232	+		Ga0059261_2047	0.33	+0.3
2,151,232	+		Ga0059261_2047	0.33	+2.0
2,151,232	+		Ga0059261_2047	0.33	-1.8
2,151,232	+		Ga0059261_2047	0.33	+2.9
2,151,232	+		Ga0059261_2047	0.33	+3.9
2,151,233	-		Ga0059261_2047	0.33	-0.7
2,151,233	-		Ga0059261_2047	0.33	+0.4
2,151,233	-		Ga0059261_2047	0.33	-1.4
2,151,233	-		Ga0059261_2047	0.33	-0.2
2,151,233	-		Ga0059261_2047	0.33	+2.0
2,151,238	+		Ga0059261_2047	0.34	+0.3
2,151,238	+		Ga0059261_2047	0.34	-0.4
2,151,238	+		Ga0059261_2047	0.34	-1.0
2,151,238	+		Ga0059261_2047	0.34	-0.2
2,151,238	+		Ga0059261_2047	0.34	+1.0
2,151,238	+		Ga0059261_2047	0.34	+0.1
2,151,239	-		Ga0059261_2047	0.34	-2.2
2,151,239	-		Ga0059261_2047	0.34	-1.7
2,151,239	-		Ga0059261_2047	0.34	+1.4
2,151,239	-		Ga0059261_2047	0.34	-0.9
2,151,239	-		Ga0059261_2047	0.34	-1.2
2,151,239	-		Ga0059261_2047	0.34	-2.1
2,151,239	-		Ga0059261_2047	0.34	-2.5
2,151,239	-		Ga0059261_2047	0.34	+0.6
2,151,239	-		Ga0059261_2047	0.34	+1.3
2,151,239	-		Ga0059261_2047	0.34	+1.4
2,151,239	-		Ga0059261_2047	0.34	+0.9
2,151,403	+		Ga0059261_2047	0.59	-0.9
2,151,404	-		Ga0059261_2047	0.59	+3.0
2,151,404	-		Ga0059261_2047	0.59	+2.5
2,151,404	-		Ga0059261_2047	0.59	+0.4
2,151,404	-		Ga0059261_2047	0.59	-1.0
2,151,457	+		Ga0059261_2047	0.67	+1.7
2,151,457	+		Ga0059261_2047	0.67	-1.0
2,151,457	+		Ga0059261_2047	0.67	-0.0
2,151,458	-		Ga0059261_2047	0.67	+2.8
2,151,458	-		Ga0059261_2047	0.67	+1.1
2,151,482	-		Ga0059261_2047	0.71	+1.1
2,151,630	+				-1.9
2,151,631	-				-0.6
2,151,685	+				-1.2
2,151,765	+				-0.2
2,151,765	+				-0.6
2,151,765	+				-0.8
2,151,765	+				+0.5
2,151,766	-				-1.9
2,151,766	-				-0.1
2,151,766	-				-0.5
2,151,766	-				-1.2
2,151,766	-				-0.6
2,151,785	-				+2.7
2,151,933	+				-1.2
2,151,933	+				+0.2
2,151,933	+				+0.5
2,151,933	+				-1.0
2,151,934	-				+0.1
2,151,934	-				+1.1
2,151,934	-				+0.5
2,151,934	-				+1.7
2,151,934	-				+2.8
2,151,997	+				-1.4
2,151,997	+				+1.5
2,151,997	+				+0.8
2,151,998	-				+1.0
2,152,037	+				-0.4
2,152,037	+				+2.1
2,152,037	+				+0.3
2,152,037	+				+2.0
2,152,037	+				+0.3
2,152,038	-				-1.2
2,152,038	-				+0.1
2,152,038	-				-1.3
2,152,038	-				+2.9
2,152,038	-				+1.2
2,152,038	-				-0.4
2,152,038	-				-0.5
2,152,038	-				-0.4
2,152,038	-				+1.7
2,152,038	-				-1.3
2,152,038	-				+0.4
2,152,041	+				+1.4
2,152,042	+				-0.4
2,152,042	+				-0.8
2,152,042	+				-0.2
2,152,042	+				+1.5
2,152,042	+				+1.0
2,152,042	+				+0.0
2,152,042	+				-0.2
2,152,042	+				-0.4
2,152,042	+				-0.3
2,152,042	+				+2.6
2,152,042	+				-3.2
2,152,042	+				+1.0
2,152,042	+				-0.2
2,152,042	+				-0.2
2,152,043	-				-0.8
2,152,043	-				+0.3
2,152,043	-				-2.4
2,152,043	-				+0.4
2,152,043	-				-0.9
2,152,043	-				+1.8
2,152,043	-				-1.5
2,152,043	-				+0.2
2,152,043	-				-1.2
2,152,043	-				-0.2
2,152,043	-				+4.6
2,152,043	-				-0.3
2,152,043	-				+0.3
2,152,043	-				-2.2
2,152,043	-				-1.3
2,152,075	+				+2.3
2,152,075	+				+0.8
2,152,076	-				+1.8
2,152,220	-				+3.2
2,152,220	-				-1.8
2,152,220	-				+1.4
2,152,233	+				+0.7
2,152,324	+		Ga0059261_2048	0.15	-0.6
2,152,324	+		Ga0059261_2048	0.15	-1.9
2,152,324	+		Ga0059261_2048	0.15	-0.8
2,152,324	+		Ga0059261_2048	0.15	-0.4
2,152,324	+		Ga0059261_2048	0.15	+0.1
2,152,325	-		Ga0059261_2048	0.15	+0.1
2,152,325	-		Ga0059261_2048	0.15	-0.4
2,152,325	-		Ga0059261_2048	0.15	+2.9
2,152,334	+		Ga0059261_2048	0.17	+4.3
2,152,335	-		Ga0059261_2048	0.17	+1.4
2,152,354	+		Ga0059261_2048	0.20	+2.1
2,152,354	+		Ga0059261_2048	0.20	+0.0
2,152,354	+		Ga0059261_2048	0.20	+1.0
2,152,354	+		Ga0059261_2048	0.20	+0.5
2,152,355	-		Ga0059261_2048	0.20	-1.6
2,152,355	-		Ga0059261_2048	0.20	-0.6
2,152,355	-		Ga0059261_2048	0.20	-1.3
2,152,423	+		Ga0059261_2048	0.32	-0.6
2,152,423	+		Ga0059261_2048	0.32	-1.0
2,152,423	+		Ga0059261_2048	0.32	-1.3
2,152,423	+		Ga0059261_2048	0.32	-0.6
2,152,423	+		Ga0059261_2048	0.32	-0.9
2,152,423	+		Ga0059261_2048	0.32	-0.0
2,152,423	+		Ga0059261_2048	0.32	+0.1
2,152,424	-		Ga0059261_2048	0.32	-0.6
2,152,424	-		Ga0059261_2048	0.32	-1.3
2,152,424	-		Ga0059261_2048	0.32	-1.5
2,152,424	-		Ga0059261_2048	0.32	-0.4
2,152,424	-		Ga0059261_2048	0.32	-0.4
2,152,424	-		Ga0059261_2048	0.32	-0.8
2,152,424	-		Ga0059261_2048	0.32	+1.3
2,152,424	-		Ga0059261_2048	0.32	+0.4
2,152,424	-				+0.4