Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1780

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,889,783	+		Ga0059261_1779	0.67	+0.5
1,889,783	+		Ga0059261_1779	0.67	+0.5
1,889,831	+		Ga0059261_1779	0.69	-1.0
1,889,831	+		Ga0059261_1779	0.69	-0.3
1,889,831	+		Ga0059261_1779	0.69	-1.0
1,889,831	+		Ga0059261_1779	0.69	+3.4
1,889,831	+		Ga0059261_1779	0.69	-0.6
1,889,831	+		Ga0059261_1779	0.69	-2.7
1,889,831	+		Ga0059261_1779	0.69	+1.2
1,889,831	+		Ga0059261_1779	0.69	-0.1
1,889,831	+		Ga0059261_1779	0.69	+1.7
1,889,832	-		Ga0059261_1779	0.69	-2.4
1,889,832	-		Ga0059261_1779	0.69	-0.2
1,889,832	-		Ga0059261_1779	0.69	+1.1
1,889,832	-		Ga0059261_1779	0.69	+3.0
1,889,832	-		Ga0059261_1779	0.69	-1.3
1,889,832	-		Ga0059261_1779	0.69	+1.2
1,889,832	-		Ga0059261_1779	0.69	+1.0
1,889,832	-		Ga0059261_1779	0.69	+0.5
1,889,832	-		Ga0059261_1779	0.69	-0.2
1,889,832	-		Ga0059261_1779	0.69	-1.3
1,889,832	-		Ga0059261_1779	0.69	-0.8
1,889,832	-		Ga0059261_1779	0.69	+1.3
1,889,832	-		Ga0059261_1779	0.69	+1.3
1,889,832	-		Ga0059261_1779	0.69	-1.0
1,889,832	-		Ga0059261_1779	0.69	+1.6
1,889,832	-		Ga0059261_1779	0.69	+0.6
1,889,832	-		Ga0059261_1779	0.69	+1.8
1,889,996	+		Ga0059261_1779	0.74	-1.8
1,889,996	+		Ga0059261_1779	0.74	+0.6
1,889,997	-		Ga0059261_1779	0.74	-3.1
1,889,997	-		Ga0059261_1779	0.74	-0.4
1,889,997	-		Ga0059261_1779	0.74	-0.6
1,889,997	-		Ga0059261_1779	0.74	+1.5
1,890,053	+		Ga0059261_1779	0.76	-0.6
1,890,053	+		Ga0059261_1779	0.76	+0.1
1,890,053	+		Ga0059261_1779	0.76	-2.8
1,890,053	+		Ga0059261_1779	0.76	-0.2
1,890,054	-		Ga0059261_1779	0.77	-2.1
1,890,054	-		Ga0059261_1779	0.77	-0.1
1,890,054	-		Ga0059261_1779	0.77	+1.4
1,890,071	+		Ga0059261_1779	0.77	+1.7
1,890,072	-		Ga0059261_1779	0.77	+0.9
1,890,074	+		Ga0059261_1779	0.77	-0.2
1,890,074	+		Ga0059261_1779	0.77	-0.6
1,890,074	+		Ga0059261_1779	0.77	+0.6
1,890,074	+		Ga0059261_1779	0.77	-0.2
1,890,075	-		Ga0059261_1779	0.77	+0.8
1,890,075	-				+2.4
1,890,113	+		Ga0059261_1779	0.79	+1.5
1,890,113	+		Ga0059261_1779	0.79	+1.3
1,890,113	+		Ga0059261_1779	0.79	+0.1
1,890,113	+		Ga0059261_1779	0.79	+2.4
1,890,113	+		Ga0059261_1779	0.79	+1.1
1,890,114	-		Ga0059261_1779	0.79	-0.6
1,890,114	-		Ga0059261_1779	0.79	-0.4
1,890,114	-		Ga0059261_1779	0.79	+0.8
1,890,143	+		Ga0059261_1779	0.80	-1.1
1,890,143	+		Ga0059261_1779	0.80	-2.5
1,890,143	+		Ga0059261_1779	0.80	-1.9
1,890,143	+		Ga0059261_1779	0.80	+1.5
1,890,143	+		Ga0059261_1779	0.80	-0.2
1,890,143	+		Ga0059261_1779	0.80	+0.6
1,890,143	+		Ga0059261_1779	0.80	+2.3
1,890,143	+		Ga0059261_1779	0.80	-0.9
1,890,143	+		Ga0059261_1779	0.80	+1.5
1,890,143	+		Ga0059261_1779	0.80	+2.3
1,890,143	+		Ga0059261_1779	0.80	-0.0
1,890,143	+		Ga0059261_1779	0.80	-0.0
1,890,144	-		Ga0059261_1779	0.80	+0.6
1,890,144	-		Ga0059261_1779	0.80	-1.5
1,890,144	-		Ga0059261_1779	0.80	+0.4
1,890,144	-		Ga0059261_1779	0.80	-1.0
1,890,144	-		Ga0059261_1779	0.80	+0.7
1,890,144	-		Ga0059261_1779	0.80	-1.3
1,890,144	-		Ga0059261_1779	0.80	-0.9
1,890,144	-		Ga0059261_1779	0.80	+0.4
1,890,144	-		Ga0059261_1779	0.80	-0.5
1,890,144	-		Ga0059261_1779	0.80	-0.2
1,890,144	-		Ga0059261_1779	0.80	-0.7
1,890,146	-		Ga0059261_1779	0.80	+1.6
1,890,146	-		Ga0059261_1779	0.80	-0.7
1,890,146	-		Ga0059261_1779	0.80	-1.1
1,890,171	-		Ga0059261_1779	0.81	+1.1
1,890,305	+		Ga0059261_1779	0.86	-2.3
1,890,305	+				+2.4
1,890,305	+		Ga0059261_1779	0.86	+0.7
1,890,305	+		Ga0059261_1779	0.86	-0.1
1,890,305	+		Ga0059261_1779	0.86	-0.3
1,890,305	+		Ga0059261_1779	0.86	+0.6
1,890,305	+		Ga0059261_1779	0.86	+0.1
1,890,305	+				+4.4
1,890,306	-		Ga0059261_1779	0.86	-1.5
1,890,306	-		Ga0059261_1779	0.86	-0.9
1,890,389	+		Ga0059261_1779	0.89	-0.3
1,890,389	+		Ga0059261_1779	0.89	-1.4
1,890,390	-		Ga0059261_1779	0.89	+0.5
1,890,407	+		Ga0059261_1779	0.89	+1.2
1,890,424	-		Ga0059261_1779	0.90	+4.0
1,890,440	+				-1.3
1,890,440	+				+1.5
1,890,440	+				-1.2
1,890,441	-				-0.3
1,890,470	+				+0.1
1,890,470	+				+3.9
1,890,470	+				-0.1
1,890,470	+				+1.1
1,890,470	+				+0.2
1,890,470	+				+1.5
1,890,471	-				+0.7
1,890,471	-				+0.5
1,890,471	-				-0.4
1,890,471	-				-0.1
1,890,471	-				+0.6
1,890,471	-				-0.5
1,890,471	-				+0.5
1,890,471	-				-0.8
1,890,497	+				-0.7
1,890,497	+				+2.1
1,890,498	-				-0.5
1,890,548	+				+1.4
1,890,548	+				-0.5
1,890,548	+				+1.8
1,890,548	+				-0.5
1,890,548	+				-0.4
1,890,549	-				-1.3
1,890,549	-				-0.9
1,890,549	-				+0.4
1,890,549	-				-0.0
1,890,549	-				-0.6
1,890,623	+				+0.1
1,890,624	-				+0.3
1,890,626	+				+1.3
1,890,627	-				-1.8
1,890,627	-				-0.2
1,890,627	-				+0.5
1,890,628	+				-0.0
1,890,629	-				-0.0
1,890,641	+				+0.4
1,890,641	+				-0.6
1,890,642	-				+0.5
1,890,642	-				-0.0
1,890,675	-				-2.5
1,890,675	-				-1.3
1,890,961	+		Ga0059261_1780	0.13	-1.3
1,890,961	+		Ga0059261_1780	0.13	-0.5
1,890,961	+		Ga0059261_1780	0.13	+3.6
1,890,961	+		Ga0059261_1780	0.13	-1.7
1,890,962	-		Ga0059261_1780	0.13	+1.8
1,890,962	-		Ga0059261_1780	0.13	-0.6
1,891,008	+		Ga0059261_1780	0.16	+1.3
1,891,008	+		Ga0059261_1780	0.16	-0.0
1,891,008	+		Ga0059261_1780	0.16	-0.6
1,891,023	+		Ga0059261_1780	0.17	-1.9
1,891,023	+		Ga0059261_1780	0.17	-0.4
1,891,023	+		Ga0059261_1780	0.17	-0.7
1,891,035	+		Ga0059261_1780	0.18	-2.5
1,891,036	-		Ga0059261_1780	0.18	+0.7
1,891,147	-		Ga0059261_1780	0.25	+1.8
1,891,203	+		Ga0059261_1780	0.29	-0.0
1,891,204	-		Ga0059261_1780	0.29	+0.6
1,891,204	-		Ga0059261_1780	0.29	-1.3
1,891,204	-		Ga0059261_1780	0.29	-1.7
1,891,204	-		Ga0059261_1780	0.29	-0.3
1,891,204	-		Ga0059261_1780	0.29	-0.4
1,891,204	-		Ga0059261_1780	0.29	-0.4
1,891,204	-		Ga0059261_1780	0.29	-0.3
1,891,204	-		Ga0059261_1780	0.29	+2.1
1,891,320	+		Ga0059261_1780	0.37	-1.6
1,891,321	-		Ga0059261_1780	0.37	-1.4
1,891,321	-		Ga0059261_1780	0.37	+0.1
1,891,428	+		Ga0059261_1780	0.44	-0.4
1,891,428	+		Ga0059261_1780	0.44	-2.0
1,891,428	+		Ga0059261_1780	0.44	-0.2
1,891,428	+		Ga0059261_1780	0.44	+0.7
1,891,428	+		Ga0059261_1780	0.44	+1.8
1,891,428	+		Ga0059261_1780	0.44	+1.6
1,891,428	+		Ga0059261_1780	0.44	-2.6
1,891,429	-		Ga0059261_1780	0.44	+0.2
1,891,429	-		Ga0059261_1780	0.44	+0.3
1,891,429	-		Ga0059261_1780	0.44	-0.5
1,891,429	-		Ga0059261_1780	0.44	+3.0
1,891,429	-		Ga0059261_1780	0.44	+1.3
1,891,473	+		Ga0059261_1780	0.47	-0.8
1,891,473	+		Ga0059261_1780	0.47	+0.3
1,891,473	+		Ga0059261_1780	0.47	-1.3
1,891,474	-		Ga0059261_1780	0.48	-0.4
1,891,474	-		Ga0059261_1780	0.48	-0.5
1,891,474	-		Ga0059261_1780	0.48	-0.1
1,891,474	-		Ga0059261_1780	0.48	-3.2
1,891,474	-		Ga0059261_1780	0.48	+0.6
1,891,545	+		Ga0059261_1780	0.52	-1.4
1,891,546	-		Ga0059261_1780	0.52	+1.0
1,891,546	-		Ga0059261_1780	0.52	-0.2
1,891,562	+		Ga0059261_1780	0.54	+1.5
1,891,562	+		Ga0059261_1780	0.54	+0.9
1,891,562	+		Ga0059261_1780	0.54	-0.7
1,891,563	-		Ga0059261_1780	0.54	+0.2
1,891,563	-		Ga0059261_1780	0.54	+0.1
1,891,581	+				+2.0
1,891,582	-		Ga0059261_1780	0.55	-0.2
1,891,582	-		Ga0059261_1780	0.55	+2.1
1,891,586	+				+2.4
1,891,586	+		Ga0059261_1780	0.55	+0.1
1,891,586	+		Ga0059261_1780	0.55	-2.0
1,891,587	-		Ga0059261_1780	0.55	-1.7
1,891,587	-		Ga0059261_1780	0.55	-1.6
1,891,587	-		Ga0059261_1780	0.55	+0.1
1,891,587	-		Ga0059261_1780	0.55	+0.1
1,891,587	-		Ga0059261_1780	0.55	-0.0
1,891,587	-		Ga0059261_1780	0.55	+2.8
1,891,587	-		Ga0059261_1780	0.55	-0.0
1,891,611	+		Ga0059261_1780	0.57	+0.1
1,891,611	+		Ga0059261_1780	0.57	-0.8
1,891,611	+		Ga0059261_1780	0.57	-1.9
1,891,611	+		Ga0059261_1780	0.57	-0.8
1,891,612	-		Ga0059261_1780	0.57	-0.4
1,891,612	-		Ga0059261_1780	0.57	+0.5
1,891,612	-		Ga0059261_1780	0.57	-1.1
1,891,612	-		Ga0059261_1780	0.57	-0.4
1,891,612	-		Ga0059261_1780	0.57	+0.2
1,891,612	-		Ga0059261_1780	0.57	-2.1
1,891,612	-		Ga0059261_1780	0.57	-0.9
1,891,612	-		Ga0059261_1780	0.57	+4.3
1,891,612	-		Ga0059261_1780	0.57	-0.1
1,891,617	+		Ga0059261_1780	0.57	-1.4
1,891,617	+		Ga0059261_1780	0.57	+4.0
1,891,617	+		Ga0059261_1780	0.57	+2.0
1,891,617	+		Ga0059261_1780	0.57	-0.6
1,891,617	+		Ga0059261_1780	0.57	-0.9
1,891,618	-		Ga0059261_1780	0.57	+4.4
1,891,618	-		Ga0059261_1780	0.57	+0.7
1,891,618	-		Ga0059261_1780	0.57	-1.0
1,891,618	-		Ga0059261_1780	0.57	+0.1
1,891,618	-		Ga0059261_1780	0.57	+0.6
1,891,653	+		Ga0059261_1780	0.60	-0.1
1,891,653	+		Ga0059261_1780	0.60	+0.7
1,891,653	+		Ga0059261_1780	0.60	-0.1
1,891,654	-		Ga0059261_1780	0.60	-0.7
1,891,654	-		Ga0059261_1780	0.60	-0.3
1,891,654	-		Ga0059261_1780	0.60	-0.0
1,891,762	+		Ga0059261_1780	0.67	+3.1
1,891,762	+		Ga0059261_1780	0.67	-0.1
1,891,762	+		Ga0059261_1780	0.67	-0.9
1,891,762	+		Ga0059261_1780	0.67	+1.4
1,891,762	+		Ga0059261_1780	0.67	-0.9
1,891,763	-		Ga0059261_1780	0.67	-0.5
1,891,763	-		Ga0059261_1780	0.67	+0.7
1,892,025	-		Ga0059261_1780	0.85	+0.4
1,892,030	+		Ga0059261_1780	0.85	+0.2
1,892,127	+				-0.4
1,892,128	-				+0.9
1,892,128	-				-1.7
1,892,128	-				-1.6
1,892,128	-				-0.1
1,892,128	-				-0.1
1,892,128	-				-1.9
1,892,160	+				-2.6
1,892,161	-				-1.1
1,892,163	+				+0.5
1,892,163	+				-0.1
1,892,163	+				-0.4
1,892,163	+				+0.9
1,892,163	+				-1.2
1,892,163	+				+0.1
1,892,163	+				-1.6
1,892,163	+				+1.7
1,892,164	-				-0.6
1,892,164	-				+2.2
1,892,164	-				-2.2
1,892,164	-				-1.3
1,892,164	-				-2.2
1,892,164	-				-1.7
1,892,164	-				-1.5
1,892,164	-				+2.9
1,892,164	-				+0.8
1,892,193	+				+0.8
1,892,193	+				-0.2
1,892,194	-				+3.3
1,892,212	+				+0.8
1,892,213	-				+3.4
1,892,213	-				+0.7
1,892,269	+				-1.3
1,892,269	+				-0.6
1,892,269	+				-1.8
1,892,269	+				+0.5
1,892,284	+				+3.6
1,892,284	+				-0.4
1,892,284	+				+0.5
1,892,284	+				-1.0
1,892,284	+				-1.4
1,892,284	+				-0.6
1,892,284	+				+0.0
1,892,284	+				-0.4
1,892,284	+				-2.4
1,892,284	+				+0.9
1,892,284	+				+0.8
1,892,284	+				+1.4
1,892,284	+				+0.9
1,892,285	-				+0.1
1,892,285	-				-0.7
1,892,285	-				-2.0
1,892,285	-				+0.0
1,892,285	-				-1.2
1,892,285	-				-0.6
1,892,285	-				-1.7
1,892,285	-				-0.4
1,892,285	-				-0.0
1,892,285	-				+1.6
1,892,286	+				+0.1
1,892,286	+				-0.2
1,892,286	+				-1.1
1,892,286	+				+3.8
1,892,286	+				-0.7
1,892,286	+				+0.2
1,892,286	+				+3.2
1,892,286	+				-1.1
1,892,286	+				-1.1
1,892,286	+				-0.6
1,892,286	+				+2.8
1,892,286	+				+0.1
1,892,286	+				-0.7
1,892,286	+				-1.1
1,892,286	+				+0.6
1,892,286	+				+1.0
1,892,286	+				+0.1
1,892,286	+				-1.2
1,892,286	+				-1.0
1,892,287	-				+0.7
1,892,287	-				-0.9
1,892,287	-				+2.4
1,892,287	-				-0.6
1,892,287	-				-0.8
1,892,287	-				-0.7
1,892,287	-				-0.8
1,892,287	-				+0.8
1,892,287	-				-1.1
1,892,287	-				+1.3
1,892,287	-				+2.4
1,892,287	-				-1.1
1,892,287	-				+1.5
1,892,287	-				-0.4
1,892,287	-				+0.4
1,892,293	-				-1.4
1,892,293	-				+1.2
1,892,344	+				-0.7
1,892,344	+				-0.8
1,892,345	-				-2.0
1,892,345	-				-1.7
1,892,345	-				+1.4
1,892,345	-				-0.6
1,892,504	+		Ga0059261_1781	0.32	+0.4
1,892,527	+		Ga0059261_1781	0.36	+1.5
1,892,527	+		Ga0059261_1781	0.36	-1.2
1,892,527	+		Ga0059261_1781	0.36	-0.3
1,892,527	+		Ga0059261_1781	0.36	+1.8
1,892,528	-		Ga0059261_1781	0.36	-1.7
1,892,550	-		Ga0059261_1781	0.39	-0.8
1,892,584	+		Ga0059261_1781	0.44	+0.6
1,892,584	+		Ga0059261_1781	0.44	-0.6
1,892,585	-		Ga0059261_1781	0.44	-2.6
1,892,585	-		Ga0059261_1781	0.44	-2.4
1,892,603	+		Ga0059261_1781	0.47	+1.5
1,892,708	+		Ga0059261_1781	0.62	-3.1
1,892,708	+		Ga0059261_1781	0.62	+1.8
1,892,708	+		Ga0059261_1781	0.62	-0.6
1,892,709	-		Ga0059261_1781	0.63	+0.6
1,892,709	-		Ga0059261_1781	0.63	+0.6
1,892,709	-		Ga0059261_1781	0.63	+0.3
1,892,713	+		Ga0059261_1781	0.63	-0.9
1,892,713	+		Ga0059261_1781	0.63	-0.3
1,892,714	-		Ga0059261_1781	0.63	+1.1
1,892,714	-		Ga0059261_1781	0.63	-2.0
1,892,714	-		Ga0059261_1781	0.63	-1.0
1,892,714	-		Ga0059261_1781	0.63	-0.2
1,892,843	+		Ga0059261_1781	0.82	-0.6
1,892,843	+		Ga0059261_1781	0.82	-2.0
1,892,843	+		Ga0059261_1781	0.82	-2.4
1,892,843	+		Ga0059261_1781	0.82	+0.5
1,892,863	+		Ga0059261_1781	0.85	-0.8
1,892,863	+		Ga0059261_1781	0.85	+0.2
1,892,864	-		Ga0059261_1781	0.85	+0.1
1,892,905	+				+1.1
1,892,905	+				+3.3
1,892,905	+				+4.5
1,892,905	+				+0.8
1,892,905	+				-0.3
1,892,906	-				+1.2
1,892,906	-				-1.0
1,892,906	-				+1.5
1,892,945	+				+0.2
1,892,945	+				+0.6
1,892,945	+				-0.4
1,892,963	+				-0.1
1,892,963	+				+0.7
1,892,963	+				+0.6
1,892,964	-				+0.5
1,892,964	-				+0.5
1,892,976	+				-0.1
1,892,976	+				-0.2
1,892,976	+				-0.1
1,892,976	+				-2.0
1,892,976	+				+1.5
1,892,976	+				+2.1
1,892,977	-				-0.3
1,892,977	-				+2.1
1,892,993	+				+0.4
1,892,993	+				-0.4
1,892,994	-				-1.1
1,893,092	+				+1.4
1,893,092	+				-2.3
1,893,092	+				+0.4
1,893,092	+				+3.3
1,893,093	-				-1.6
1,893,093	-				-0.8
1,893,093	-				-0.7
1,893,106	+				-0.9
1,893,106	+				-1.6
1,893,106	+				-0.7
1,893,106	+				+0.3
1,893,107	-				+0.8
1,893,107	-				-2.4
1,893,107	-				-1.4
1,893,108	+				+0.4
1,893,108	+				+0.2
1,893,108	+				+4.0
1,893,108	+				-0.9
1,893,108	+				-0.7
1,893,109	-				-1.0
1,893,109	-				+2.7
1,893,109	-				-0.6
1,893,109	-				-1.3
1,893,109	-				+0.8
1,893,109	-				-0.7
1,893,116	+				+0.7
1,893,116	+				+1.2
1,893,117	-				-1.0
1,893,141	+				-0.9
1,893,168	+				-1.6
1,893,169	-				-1.7
1,893,187	+				-0.7
1,893,187	+				+3.1
1,893,188	-				+2.6
1,893,188	-				-1.5
1,893,188	-				-3.2
1,893,239	+				+0.8
1,893,239	+				-1.1
1,893,240	-				-0.9