Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1483

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,565,790	+				-0.2
1,565,790	+				-1.0
1,565,790	+				+0.7
1,566,019	+				+0.3
1,566,019	+				-1.6
1,566,019	+				+0.6
1,566,020	-				+3.1
1,566,020	-				+1.7
1,566,020	-				-1.3
1,566,023	+				+0.4
1,566,024	-				+1.5
1,566,024	-				+0.1
1,566,030	-				+1.1
1,566,034	+				-1.9
1,566,034	+				-0.2
1,566,034	+				-1.3
1,566,035	-				+0.0
1,566,035	-				+1.6
1,566,035	-				+0.5
1,566,279	+				+1.2
1,566,280	-				-1.1
1,566,280	-				-1.1
1,566,280	-				+0.5
1,566,280	-				+0.3
1,566,453	+		Ga0059261_1482	0.44	-1.0
1,566,453	+		Ga0059261_1482	0.44	-1.9
1,566,453	+		Ga0059261_1482	0.44	+3.5
1,566,453	+		Ga0059261_1482	0.44	-0.1
1,566,453	+		Ga0059261_1482	0.44	-0.9
1,566,453	+		Ga0059261_1482	0.44	-1.1
1,566,453	+		Ga0059261_1482	0.44	+1.5
1,566,453	+		Ga0059261_1482	0.44	-1.3
1,566,453	+		Ga0059261_1482	0.44	+0.1
1,566,453	+				-0.0
1,566,453	+		Ga0059261_1482	0.44	-0.1
1,566,453	+		Ga0059261_1482	0.44	+1.3
1,566,453	+				+1.3
1,566,453	+		Ga0059261_1482	0.44	+0.5
1,566,453	+		Ga0059261_1482	0.44	+2.9
1,566,453	+		Ga0059261_1482	0.44	-0.1
1,566,454	-		Ga0059261_1482	0.44	+0.3
1,566,454	-		Ga0059261_1482	0.44	+1.1
1,566,454	-		Ga0059261_1482	0.44	-1.3
1,566,474	-		Ga0059261_1482	0.48	-0.0
1,566,501	+		Ga0059261_1482	0.54	-0.4
1,566,501	+		Ga0059261_1482	0.54	-1.0
1,566,501	+		Ga0059261_1482	0.54	-0.8
1,566,501	+		Ga0059261_1482	0.54	-0.3
1,566,501	+		Ga0059261_1482	0.54	+0.7
1,566,501	+		Ga0059261_1482	0.54	+1.2
1,566,501	+		Ga0059261_1482	0.54	+0.7
1,566,501	+		Ga0059261_1482	0.54	+0.3
1,566,501	+		Ga0059261_1482	0.54	-2.2
1,566,501	+		Ga0059261_1482	0.54	+0.0
1,566,501	+		Ga0059261_1482	0.54	+1.5
1,566,501	+		Ga0059261_1482	0.54	+0.4
1,566,501	+		Ga0059261_1482	0.54	-1.4
1,566,501	+		Ga0059261_1482	0.54	-0.1
1,566,501	+		Ga0059261_1482	0.54	-1.0
1,566,502	-		Ga0059261_1482	0.54	-0.3
1,566,502	-		Ga0059261_1482	0.54	+1.2
1,566,502	-		Ga0059261_1482	0.54	-1.0
1,566,502	-		Ga0059261_1482	0.54	+0.5
1,566,502	-		Ga0059261_1482	0.54	-0.2
1,566,502	-		Ga0059261_1482	0.54	-0.6
1,566,502	-		Ga0059261_1482	0.54	+0.2
1,566,533	+		Ga0059261_1482	0.61	-0.5
1,566,533	+		Ga0059261_1482	0.61	-1.6
1,566,719	+				-1.5
1,566,719	+				+0.0
1,566,719	+				-0.3
1,566,720	-				-0.2
1,566,720	-				+0.7
1,566,720	-				-1.5
1,566,770	-				-2.9
1,567,461	+		Ga0059261_1483	0.57	-0.7
1,567,462	-		Ga0059261_1483	0.57	+0.4
1,567,512	+		Ga0059261_1483	0.61	-1.0
1,567,512	+		Ga0059261_1483	0.61	-0.5
1,567,512	+		Ga0059261_1483	0.61	+1.1
1,567,512	+		Ga0059261_1483	0.61	-2.2
1,567,512	+		Ga0059261_1483	0.61	-1.7
1,567,512	+		Ga0059261_1483	0.61	-0.4
1,567,512	+		Ga0059261_1483	0.61	+0.1
1,567,512	+		Ga0059261_1483	0.61	-1.6
1,567,512	+		Ga0059261_1483	0.61	+1.1
1,567,513	-		Ga0059261_1483	0.61	-0.6
1,567,513	-		Ga0059261_1483	0.61	-1.6
1,567,513	-		Ga0059261_1483	0.61	+1.3
1,567,513	-		Ga0059261_1483	0.61	-1.7
1,567,540	+		Ga0059261_1483	0.64	+0.7
1,567,540	+		Ga0059261_1483	0.64	-0.7
1,567,540	+		Ga0059261_1483	0.64	+1.3
1,567,540	+		Ga0059261_1483	0.64	-0.5
1,567,540	+		Ga0059261_1483	0.64	-0.6
1,567,540	+		Ga0059261_1483	0.64	-0.0
1,567,540	+		Ga0059261_1483	0.64	-2.8
1,567,540	+		Ga0059261_1483	0.64	-1.5
1,567,541	-		Ga0059261_1483	0.64	-0.1
1,567,541	-		Ga0059261_1483	0.64	-0.5
1,567,541	-		Ga0059261_1483	0.64	-0.9
1,567,541	-		Ga0059261_1483	0.64	+1.8
1,567,541	-		Ga0059261_1483	0.64	+0.1
1,567,541	-		Ga0059261_1483	0.64	+2.6
1,567,541	-				+0.7
1,567,541	-		Ga0059261_1483	0.64	-1.8
1,567,541	-		Ga0059261_1483	0.64	-1.4
1,567,541	-		Ga0059261_1483	0.64	+0.3
1,567,541	-				+0.7
1,567,541	-		Ga0059261_1483	0.64	-0.3
1,567,600	-		Ga0059261_1483	0.69	+1.3
1,567,600	-		Ga0059261_1483	0.69	+1.7
1,567,600	-		Ga0059261_1483	0.69	-1.1
1,567,600	-		Ga0059261_1483	0.69	+0.9
1,567,600	-		Ga0059261_1483	0.69	+2.3
1,567,600	-		Ga0059261_1483	0.69	+1.9
1,567,810	+		Ga0059261_1483	0.86	+0.4
1,567,810	+		Ga0059261_1483	0.86	-1.2
1,567,811	-		Ga0059261_1483	0.86	+1.3
1,567,811	-		Ga0059261_1483	0.86	+0.1
1,567,812	+		Ga0059261_1483	0.86	+0.2
1,567,812	+		Ga0059261_1483	0.86	-0.8
1,567,812	+		Ga0059261_1483	0.86	+0.4
1,567,812	+		Ga0059261_1483	0.86	+0.1
1,567,812	+		Ga0059261_1483	0.86	+0.2
1,567,812	+		Ga0059261_1483	0.86	+0.8
1,567,812	+		Ga0059261_1483	0.86	+0.6
1,567,812	+		Ga0059261_1483	0.86	+0.0
1,567,812	+		Ga0059261_1483	0.86	-1.3
1,567,812	+		Ga0059261_1483	0.86	-0.3
1,567,812	+		Ga0059261_1483	0.86	+0.3
1,567,812	+		Ga0059261_1483	0.86	-0.7
1,567,812	+		Ga0059261_1483	0.86	-0.3
1,567,813	-		Ga0059261_1483	0.87	-0.3
1,567,813	-		Ga0059261_1483	0.87	-1.9
1,567,813	-		Ga0059261_1483	0.87	+1.0
1,567,813	-		Ga0059261_1483	0.87	-2.4
1,567,813	-		Ga0059261_1483	0.87	-0.6
1,567,813	-		Ga0059261_1483	0.87	-0.4
1,567,813	-		Ga0059261_1483	0.87	-1.8
1,567,813	-		Ga0059261_1483	0.87	-1.8
1,567,813	-		Ga0059261_1483	0.87	+0.6
1,567,813	-		Ga0059261_1483	0.87	-0.2
1,567,813	-		Ga0059261_1483	0.87	+0.2
1,567,813	-		Ga0059261_1483	0.87	-0.8
1,567,813	-		Ga0059261_1483	0.87	-2.1
1,567,813	-		Ga0059261_1483	0.87	+0.0
1,567,813	-		Ga0059261_1483	0.87	+0.0
1,567,813	-		Ga0059261_1483	0.87	-0.5
1,567,941	+				-0.4
1,567,941	+				-1.0
1,567,941	+				-0.0
1,567,941	+				-1.3
1,567,941	+				-1.1
1,567,941	+				-1.7
1,567,941	+				+0.7
1,567,941	+				-0.7
1,567,941	+				+1.1
1,567,941	+				+3.4
1,567,941	+				+0.3
1,567,941	+				+0.5
1,567,941	+				+0.0
1,567,942	-				-0.8
1,567,942	-				-0.2
1,567,942	-				-1.0
1,567,942	-				+0.1
1,567,942	-				-1.8
1,567,942	-				-0.8
1,567,942	-				+1.6
1,567,946	+				-1.4
1,567,946	+				-1.6
1,567,946	+				-0.4
1,567,946	+				+3.6
1,567,946	+				-2.0
1,567,946	+				-1.0
1,567,947	-				+1.0
1,567,947	-				-0.1
1,567,947	-				-2.3
1,567,947	-				-0.5
1,567,947	-				-0.2
1,567,947	-				+3.6
1,567,947	-				-0.5
1,567,947	-				+0.6
1,567,947	-				-0.4
1,567,947	-				+0.2
1,568,010	+				+0.5
1,568,011	-				-1.1
1,568,019	+				-2.2
1,568,265	+		Ga0059261_1484	0.86	+0.0
1,568,265	+		Ga0059261_1484	0.86	-1.5
1,568,265	+		Ga0059261_1484	0.86	-1.8
1,568,265	+		Ga0059261_1484	0.86	-0.7
1,568,266	-		Ga0059261_1484	0.86	-0.8
1,568,266	-		Ga0059261_1484	0.86	-1.8
1,568,272	-		Ga0059261_1484	0.88	-3.3
1,568,470	+		Ga0059261_1485	0.24	-0.2
1,568,470	+		Ga0059261_1485	0.24	-0.4
1,568,470	+		Ga0059261_1485	0.24	-0.6
1,568,471	-		Ga0059261_1485	0.24	+1.1
1,568,471	-		Ga0059261_1485	0.24	-1.2
1,568,471	-		Ga0059261_1485	0.24	+0.2
1,568,471	-		Ga0059261_1485	0.24	-2.4
1,568,471	-		Ga0059261_1485	0.24	+0.6
1,568,471	-		Ga0059261_1485	0.24	+0.7
1,568,471	-		Ga0059261_1485	0.24	-0.2
1,568,471	-		Ga0059261_1485	0.24	-0.6
1,568,794	+		Ga0059261_1485	0.67	-0.4
1,568,794	+		Ga0059261_1485	0.67	+0.0
1,568,795	-		Ga0059261_1485	0.67	-1.8
1,568,796	-		Ga0059261_1485	0.67	+1.4