Experiment: inner cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0836 and Ga0059261_0837 are separated by 138 nucleotides Ga0059261_0837 and Ga0059261_0838 overlap by 8 nucleotides
Ga0059261_0836: Ga0059261_0836 - Beta-lactamase class C and other penicillin binding proteins, at 874,407 to 875,633
_0836
Ga0059261_0837: Ga0059261_0837 - 3-hydroxyacyl-CoA dehydrogenase, at 875,772 to 877,802
_0837
Ga0059261_0838: Ga0059261_0838 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases, at 877,795 to 879,156
_0838
Position (kb) 875
876
877
878 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 874.839 kb on + strand, within Ga0059261_0836 at 874.839 kb on + strand, within Ga0059261_0836 at 874.839 kb on + strand, within Ga0059261_0836 at 874.839 kb on + strand, within Ga0059261_0836 at 874.840 kb on - strand, within Ga0059261_0836 at 874.840 kb on - strand, within Ga0059261_0836 at 874.840 kb on - strand, within Ga0059261_0836 at 874.902 kb on + strand, within Ga0059261_0836 at 874.902 kb on + strand, within Ga0059261_0836 at 874.902 kb on + strand, within Ga0059261_0836 at 874.903 kb on - strand, within Ga0059261_0836 at 874.913 kb on + strand, within Ga0059261_0836 at 874.913 kb on + strand, within Ga0059261_0836 at 874.914 kb on - strand, within Ga0059261_0836 at 874.983 kb on + strand, within Ga0059261_0836 at 874.983 kb on + strand, within Ga0059261_0836 at 874.984 kb on - strand, within Ga0059261_0836 at 874.984 kb on - strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.169 kb on + strand, within Ga0059261_0836 at 875.170 kb on - strand, within Ga0059261_0836 at 875.170 kb on - strand, within Ga0059261_0836 at 875.170 kb on - strand, within Ga0059261_0836 at 875.170 kb on - strand, within Ga0059261_0836 at 875.170 kb on - strand, within Ga0059261_0836 at 875.253 kb on + strand, within Ga0059261_0836 at 875.350 kb on + strand, within Ga0059261_0836 at 875.351 kb on - strand, within Ga0059261_0836 at 875.351 kb on - strand, within Ga0059261_0836 at 875.351 kb on - strand, within Ga0059261_0836 at 875.351 kb on - strand, within Ga0059261_0836 at 875.490 kb on + strand, within Ga0059261_0836 at 875.491 kb on - strand, within Ga0059261_0836 at 875.491 kb on - strand, within Ga0059261_0836 at 875.491 kb on - strand, within Ga0059261_0836 at 875.616 kb on + strand at 875.616 kb on + strand at 875.616 kb on + strand at 875.617 kb on - strand at 875.617 kb on - strand at 875.617 kb on - strand at 875.650 kb on + strand at 875.650 kb on + strand at 876.110 kb on + strand, within Ga0059261_0837 at 876.111 kb on - strand, within Ga0059261_0837 at 876.327 kb on + strand, within Ga0059261_0837 at 876.327 kb on + strand, within Ga0059261_0837 at 876.327 kb on + strand, within Ga0059261_0837 at 876.327 kb on + strand, within Ga0059261_0837 at 876.328 kb on - strand, within Ga0059261_0837 at 876.328 kb on - strand, within Ga0059261_0837 at 876.328 kb on - strand, within Ga0059261_0837 at 876.328 kb on - strand, within Ga0059261_0837 at 876.498 kb on + strand, within Ga0059261_0837 at 876.499 kb on - strand, within Ga0059261_0837 at 876.784 kb on - strand, within Ga0059261_0837 at 876.784 kb on - strand, within Ga0059261_0837 at 876.906 kb on + strand, within Ga0059261_0837 at 876.906 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.914 kb on + strand, within Ga0059261_0837 at 876.915 kb on - strand, within Ga0059261_0837 at 876.915 kb on - strand, within Ga0059261_0837 at 876.993 kb on + strand, within Ga0059261_0837 at 876.993 kb on + strand, within Ga0059261_0837 at 876.993 kb on + strand, within Ga0059261_0837 at 876.993 kb on + strand, within Ga0059261_0837 at 876.993 kb on + strand, within Ga0059261_0837 at 876.994 kb on - strand, within Ga0059261_0837 at 876.994 kb on - strand, within Ga0059261_0837 at 876.994 kb on - strand, within Ga0059261_0837 at 876.994 kb on - strand, within Ga0059261_0837 at 877.189 kb on - strand, within Ga0059261_0837 at 877.189 kb on - strand, within Ga0059261_0837 at 877.379 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.437 kb on + strand, within Ga0059261_0837 at 877.438 kb on - strand, within Ga0059261_0837 at 877.438 kb on - strand, within Ga0059261_0837 at 877.438 kb on - strand, within Ga0059261_0837 at 877.438 kb on - strand, within Ga0059261_0837 at 877.443 kb on + strand at 877.444 kb on - strand, within Ga0059261_0837 at 877.444 kb on - strand, within Ga0059261_0837 at 877.444 kb on - strand, within Ga0059261_0837 at 877.566 kb on + strand, within Ga0059261_0837 at 877.566 kb on + strand, within Ga0059261_0837 at 877.566 kb on + strand, within Ga0059261_0837 at 877.566 kb on + strand, within Ga0059261_0837 at 877.566 kb on + strand, within Ga0059261_0837 at 877.566 kb on + strand, within Ga0059261_0837 at 877.567 kb on - strand, within Ga0059261_0837 at 877.630 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.647 kb on + strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.648 kb on - strand at 877.653 kb on + strand at 877.668 kb on + strand at 878.127 kb on + strand, within Ga0059261_0838 at 878.127 kb on + strand, within Ga0059261_0838 at 878.128 kb on - strand, within Ga0059261_0838 at 878.242 kb on + strand at 878.242 kb on + strand, within Ga0059261_0838 at 878.242 kb on + strand, within Ga0059261_0838 at 878.242 kb on + strand, within Ga0059261_0838 at 878.242 kb on + strand, within Ga0059261_0838 at 878.243 kb on - strand, within Ga0059261_0838 at 878.243 kb on - strand, within Ga0059261_0838 at 878.243 kb on - strand, within Ga0059261_0838 at 878.243 kb on - strand, within Ga0059261_0838 at 878.413 kb on + strand, within Ga0059261_0838 at 878.413 kb on + strand, within Ga0059261_0838 at 878.413 kb on + strand, within Ga0059261_0838 at 878.414 kb on - strand, within Ga0059261_0838 at 878.414 kb on - strand, within Ga0059261_0838 at 878.414 kb on - strand, within Ga0059261_0838 at 878.414 kb on - strand, within Ga0059261_0838 at 878.431 kb on + strand, within Ga0059261_0838 at 878.431 kb on + strand, within Ga0059261_0838 at 878.431 kb on + strand, within Ga0059261_0838 at 878.432 kb on - strand, within Ga0059261_0838 at 878.530 kb on - strand, within Ga0059261_0838 at 878.541 kb on + strand, within Ga0059261_0838 at 878.542 kb on - strand, within Ga0059261_0838 at 878.542 kb on - strand, within Ga0059261_0838 at 878.591 kb on + strand, within Ga0059261_0838 at 878.591 kb on + strand, within Ga0059261_0838 at 878.591 kb on + strand, within Ga0059261_0838 at 878.591 kb on + strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.592 kb on - strand, within Ga0059261_0838 at 878.740 kb on + strand, within Ga0059261_0838 at 878.740 kb on + strand, within Ga0059261_0838 at 878.740 kb on + strand, within Ga0059261_0838
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, LB soft agar motility assay remove 874,839 + Ga0059261_0836 0.35 -1.2 874,839 + Ga0059261_0836 0.35 -0.1 874,839 + Ga0059261_0836 0.35 -0.8 874,839 + Ga0059261_0836 0.35 -1.2 874,840 - Ga0059261_0836 0.35 -0.7 874,840 - Ga0059261_0836 0.35 +0.6 874,840 - Ga0059261_0836 0.35 -1.4 874,902 + Ga0059261_0836 0.40 -2.0 874,902 + Ga0059261_0836 0.40 +2.6 874,902 + Ga0059261_0836 0.40 -0.5 874,903 - Ga0059261_0836 0.40 -1.3 874,913 + Ga0059261_0836 0.41 -0.3 874,913 + Ga0059261_0836 0.41 +1.7 874,914 - Ga0059261_0836 0.41 -0.5 874,983 + Ga0059261_0836 0.47 -2.2 874,983 + Ga0059261_0836 0.47 +1.3 874,984 - Ga0059261_0836 0.47 -2.9 874,984 - Ga0059261_0836 0.47 -1.0 875,169 + Ga0059261_0836 0.62 +1.5 875,169 + Ga0059261_0836 0.62 -2.4 875,169 + Ga0059261_0836 0.62 -2.3 875,169 + Ga0059261_0836 0.62 -0.7 875,169 + Ga0059261_0836 0.62 -1.3 875,169 + Ga0059261_0836 0.62 -0.5 875,169 + Ga0059261_0836 0.62 +0.4 875,169 + Ga0059261_0836 0.62 +2.8 875,169 + Ga0059261_0836 0.62 -3.0 875,169 + Ga0059261_0836 0.62 +2.3 875,170 - Ga0059261_0836 0.62 +0.7 875,170 - Ga0059261_0836 0.62 +1.0 875,170 - Ga0059261_0836 0.62 +1.3 875,170 - Ga0059261_0836 0.62 +0.6 875,170 - Ga0059261_0836 0.62 -0.2 875,253 + Ga0059261_0836 0.69 -2.2 875,350 + Ga0059261_0836 0.77 +2.3 875,351 - Ga0059261_0836 0.77 +0.4 875,351 - Ga0059261_0836 0.77 -0.3 875,351 - Ga0059261_0836 0.77 +0.3 875,351 - Ga0059261_0836 0.77 -1.1 875,490 + Ga0059261_0836 0.88 -0.5 875,491 - Ga0059261_0836 0.88 -2.2 875,491 - Ga0059261_0836 0.88 -1.1 875,491 - Ga0059261_0836 0.88 +1.1 875,616 + +0.2 875,616 + +0.6 875,616 + -1.3 875,617 - -1.9 875,617 - -1.1 875,617 - +0.1 875,650 + -1.2 875,650 + -0.3 876,110 + Ga0059261_0837 0.17 +1.1 876,111 - Ga0059261_0837 0.17 -0.2 876,327 + Ga0059261_0837 0.27 -0.7 876,327 + Ga0059261_0837 0.27 +0.9 876,327 + Ga0059261_0837 0.27 -2.7 876,327 + Ga0059261_0837 0.27 -1.1 876,328 - Ga0059261_0837 0.27 -2.0 876,328 - Ga0059261_0837 0.27 -1.4 876,328 - Ga0059261_0837 0.27 -0.0 876,328 - Ga0059261_0837 0.27 -0.3 876,498 + Ga0059261_0837 0.36 -2.0 876,499 - Ga0059261_0837 0.36 -1.8 876,784 - Ga0059261_0837 0.50 -1.5 876,784 - Ga0059261_0837 0.50 +1.7 876,906 + Ga0059261_0837 0.56 +0.0 876,906 + Ga0059261_0837 0.56 -0.1 876,914 + Ga0059261_0837 0.56 +0.5 876,914 + Ga0059261_0837 0.56 +0.8 876,914 + Ga0059261_0837 0.56 +1.3 876,914 + Ga0059261_0837 0.56 +1.5 876,914 + Ga0059261_0837 0.56 -0.1 876,914 + Ga0059261_0837 0.56 +1.5 876,914 + Ga0059261_0837 0.56 +0.7 876,914 + Ga0059261_0837 0.56 -0.6 876,914 + Ga0059261_0837 0.56 +1.5 876,914 + Ga0059261_0837 0.56 +1.5 876,915 - Ga0059261_0837 0.56 -2.1 876,915 - Ga0059261_0837 0.56 -3.2 876,993 + Ga0059261_0837 0.60 -1.6 876,993 + Ga0059261_0837 0.60 -1.4 876,993 + Ga0059261_0837 0.60 -0.1 876,993 + Ga0059261_0837 0.60 -1.5 876,993 + Ga0059261_0837 0.60 +1.0 876,994 - Ga0059261_0837 0.60 +0.1 876,994 - Ga0059261_0837 0.60 -1.3 876,994 - Ga0059261_0837 0.60 -2.3 876,994 - Ga0059261_0837 0.60 +0.5 877,189 - Ga0059261_0837 0.70 +0.9 877,189 - Ga0059261_0837 0.70 -1.1 877,379 + Ga0059261_0837 0.79 -1.3 877,437 + Ga0059261_0837 0.82 +0.4 877,437 + Ga0059261_0837 0.82 -1.9 877,437 + Ga0059261_0837 0.82 -0.6 877,437 + Ga0059261_0837 0.82 +0.7 877,437 + Ga0059261_0837 0.82 -1.1 877,437 + Ga0059261_0837 0.82 +0.5 877,437 + Ga0059261_0837 0.82 +0.9 877,438 - Ga0059261_0837 0.82 -0.2 877,438 - Ga0059261_0837 0.82 +2.7 877,438 - Ga0059261_0837 0.82 -1.5 877,438 - Ga0059261_0837 0.82 -0.9 877,443 + -0.1 877,444 - Ga0059261_0837 0.82 +1.7 877,444 - Ga0059261_0837 0.82 -0.1 877,444 - Ga0059261_0837 0.82 +0.9 877,566 + Ga0059261_0837 0.88 +1.1 877,566 + Ga0059261_0837 0.88 +0.3 877,566 + Ga0059261_0837 0.88 -0.3 877,566 + Ga0059261_0837 0.88 +0.0 877,566 + Ga0059261_0837 0.88 -0.7 877,566 + Ga0059261_0837 0.88 -0.2 877,567 - Ga0059261_0837 0.88 -0.7 877,630 + +1.1 877,647 + +2.6 877,647 + -0.7 877,647 + -0.1 877,647 + +0.9 877,647 + -0.0 877,647 + -0.1 877,647 + +0.3 877,647 + +1.8 877,647 + -1.4 877,647 + -1.4 877,648 - -0.1 877,648 - -0.9 877,648 - -2.6 877,648 - -1.5 877,648 - -1.1 877,648 - +3.3 877,648 - -1.4 877,648 - -0.9 877,648 - -0.3 877,648 - -0.7 877,648 - +2.5 877,648 - +3.3 877,648 - +1.3 877,648 - +1.8 877,648 - +1.0 877,653 + +1.0 877,668 + -2.1 878,127 + Ga0059261_0838 0.24 +0.9 878,127 + Ga0059261_0838 0.24 +2.6 878,128 - Ga0059261_0838 0.24 -0.5 878,242 + +2.3 878,242 + Ga0059261_0838 0.33 +0.1 878,242 + Ga0059261_0838 0.33 -0.7 878,242 + Ga0059261_0838 0.33 -0.2 878,242 + Ga0059261_0838 0.33 -1.2 878,243 - Ga0059261_0838 0.33 -1.0 878,243 - Ga0059261_0838 0.33 +0.3 878,243 - Ga0059261_0838 0.33 +0.3 878,243 - Ga0059261_0838 0.33 -1.6 878,413 + Ga0059261_0838 0.45 -1.7 878,413 + Ga0059261_0838 0.45 +0.7 878,413 + Ga0059261_0838 0.45 +0.8 878,414 - Ga0059261_0838 0.45 +0.5 878,414 - Ga0059261_0838 0.45 -1.1 878,414 - Ga0059261_0838 0.45 +1.4 878,414 - Ga0059261_0838 0.45 +1.8 878,431 + Ga0059261_0838 0.47 -1.8 878,431 + Ga0059261_0838 0.47 +1.2 878,431 + Ga0059261_0838 0.47 -1.8 878,432 - Ga0059261_0838 0.47 +0.9 878,530 - Ga0059261_0838 0.54 -1.9 878,541 + Ga0059261_0838 0.55 +2.8 878,542 - Ga0059261_0838 0.55 -1.4 878,542 - Ga0059261_0838 0.55 -0.6 878,591 + Ga0059261_0838 0.58 +1.8 878,591 + Ga0059261_0838 0.58 -1.9 878,591 + Ga0059261_0838 0.58 -1.2 878,591 + Ga0059261_0838 0.58 +0.4 878,592 - Ga0059261_0838 0.59 -0.2 878,592 - Ga0059261_0838 0.59 -0.5 878,592 - Ga0059261_0838 0.59 +0.3 878,592 - Ga0059261_0838 0.59 -2.1 878,592 - Ga0059261_0838 0.59 +0.9 878,592 - Ga0059261_0838 0.59 +0.3 878,592 - Ga0059261_0838 0.59 -1.2 878,740 + Ga0059261_0838 0.69 +1.1 878,740 + Ga0059261_0838 0.69 +0.5 878,740 + Ga0059261_0838 0.69 -1.2
Or see this region's nucleotide sequence