Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_13260

Experiment: LB_0.5%bileacids_Anaerobic_180MIN_ZN17A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
2,819,427	-				-0.6
2,819,448	-				+1.0
2,819,509	+				+0.1
2,819,594	+				+0.2
2,819,594	+				+1.4
2,819,599	+				-0.4
2,819,599	+				-0.1
2,819,622	-		CSW01_13255	0.11	+0.5
2,819,627	-		CSW01_13255	0.12	+1.4
2,819,627	-		CSW01_13255	0.12	-0.9
2,819,632	-		CSW01_13255	0.13	-0.3
2,819,642	+		CSW01_13255	0.14	+0.4
2,819,649	-		CSW01_13255	0.16	+0.6
2,819,689	+		CSW01_13255	0.23	+0.3
2,819,690	+		CSW01_13255	0.23	+0.4
2,819,708	-		CSW01_13255	0.26	-0.4
2,819,713	+		CSW01_13255	0.27	+0.3
2,819,721	-		CSW01_13255	0.28	-0.2
2,819,731	-		CSW01_13255	0.30	-0.5
2,819,795	+		CSW01_13255	0.41	-0.2
2,819,795	+		CSW01_13255	0.41	-0.1
2,819,801	+		CSW01_13255	0.42	+0.2
2,819,801	+		CSW01_13255	0.42	-0.0
2,819,809	-		CSW01_13255	0.43	+0.2
2,819,838	+		CSW01_13255	0.48	+0.4
2,819,851	-		CSW01_13255	0.50	+0.1
2,819,861	+		CSW01_13255	0.52	+1.1
2,819,908	+		CSW01_13255	0.60	-1.1
2,819,957	+		CSW01_13255	0.69	+0.2
2,820,051	-		CSW01_13255	0.85	+0.1
2,820,057	+		CSW01_13255	0.86	-0.3
2,820,057	+		CSW01_13255	0.86	-0.6
2,820,057	+		CSW01_13255	0.86	+0.7
2,820,057	+		CSW01_13255	0.86	+0.9
2,820,057	+		CSW01_13255	0.86	-0.7
2,820,057	+		CSW01_13255	0.86	-0.9
2,820,057	+		CSW01_13255	0.86	-0.7
2,820,057	+		CSW01_13255	0.86	+0.3
2,820,065	-		CSW01_13255	0.87	-0.2
2,820,065	-		CSW01_13255	0.87	+0.6
2,820,065	-		CSW01_13255	0.87	-0.2
2,820,065	-		CSW01_13255	0.87	+0.1
2,820,065	-		CSW01_13255	0.87	+0.6
2,820,065	-		CSW01_13255	0.87	-0.7
2,820,065	-		CSW01_13255	0.87	+0.3
2,820,065	-		CSW01_13255	0.87	-0.6
2,820,065	-		CSW01_13255	0.87	-0.1
2,820,141	+				+0.7
2,820,178	+				-0.2
2,820,183	-				+0.4
2,820,191	+				+0.4
2,820,199	-				+0.0
2,820,208	+				+0.4
2,820,208	+				+0.4
2,820,211	-				+0.1
2,820,230	-				-0.0
2,820,342	-				-0.3
2,820,386	-				-0.3
2,820,399	+				+0.9
2,820,407	-				+0.0
2,820,422	+				-0.3
2,820,581	+		CSW01_13260	0.13	+0.1
2,820,645	+		CSW01_13260	0.18	+0.6
2,820,645	+		CSW01_13260	0.18	-1.2
2,820,645	+		CSW01_13260	0.18	-0.5
2,820,645	+		CSW01_13260	0.18	+0.5
2,820,653	-		CSW01_13260	0.18	+0.2
2,820,653	-		CSW01_13260	0.18	-0.5
2,820,653	-		CSW01_13260	0.18	-0.4
2,820,653	-		CSW01_13260	0.18	-0.6
2,820,712	+		CSW01_13260	0.23	+1.5
2,820,771	-		CSW01_13260	0.27	+2.4
2,820,815	-		CSW01_13260	0.30	-0.4
2,820,847	+		CSW01_13260	0.32	-0.2
2,820,865	+		CSW01_13260	0.33	-0.1
2,820,884	+		CSW01_13260	0.35	-0.4
2,820,884	+		CSW01_13260	0.35	-0.3
2,820,884	+		CSW01_13260	0.35	-0.6
2,820,884	+		CSW01_13260	0.35	-0.3
2,820,884	+		CSW01_13260	0.35	+0.5
2,820,892	-		CSW01_13260	0.35	+0.4
2,820,913	+		CSW01_13260	0.37	-0.7
2,820,913	+		CSW01_13260	0.37	-0.1
2,820,923	+		CSW01_13260	0.38	-0.2
2,820,923	+		CSW01_13260	0.38	-2.1
2,820,923	+		CSW01_13260	0.38	-0.3
2,820,931	-		CSW01_13260	0.38	-0.7
2,820,931	-		CSW01_13260	0.38	-0.2
2,821,100	+		CSW01_13260	0.50	+0.3
2,821,100	+		CSW01_13260	0.50	-0.0
2,821,135	+		CSW01_13260	0.53	-0.6
2,821,135	+		CSW01_13260	0.53	+0.1
2,821,135	+		CSW01_13260	0.53	-0.4
2,821,135	+		CSW01_13260	0.53	-0.3
2,821,135	+		CSW01_13260	0.53	-0.5
2,821,141	-		CSW01_13260	0.53	+0.5
2,821,143	-		CSW01_13260	0.53	+0.5
2,821,143	-		CSW01_13260	0.53	+0.0
2,821,143	-		CSW01_13260	0.53	+0.4
2,821,143	-		CSW01_13260	0.53	-0.3
2,821,143	-		CSW01_13260	0.53	+0.6
2,821,143	-		CSW01_13260	0.53	-0.2
2,821,143	-		CSW01_13260	0.53	+0.7
2,821,143	-		CSW01_13260	0.53	+0.3
2,821,167	+		CSW01_13260	0.55	-0.6
2,821,172	+		CSW01_13260	0.55	-0.1
2,821,177	+		CSW01_13260	0.55	-0.3
2,821,178	+		CSW01_13260	0.56	+0.2
2,821,178	+		CSW01_13260	0.56	+0.2
2,821,180	-		CSW01_13260	0.56	+0.1
2,821,184	+		CSW01_13260	0.56	-0.6
2,821,186	-		CSW01_13260	0.56	+0.7
2,821,214	+		CSW01_13260	0.58	+0.5
2,821,233	+		CSW01_13260	0.59	-1.0
2,821,241	-		CSW01_13260	0.60	-0.9
2,821,278	-		CSW01_13260	0.63	+0.2
2,821,318	+		CSW01_13260	0.65	+0.4
2,821,318	+		CSW01_13260	0.65	-0.0
2,821,318	+		CSW01_13260	0.65	+1.2
2,821,318	+		CSW01_13260	0.65	-0.5
2,821,318	+		CSW01_13260	0.65	-0.1
2,821,318	+		CSW01_13260	0.65	-0.2
2,821,318	+		CSW01_13260	0.65	+0.6
2,821,326	-		CSW01_13260	0.66	-0.2
2,821,326	-		CSW01_13260	0.66	+0.4
2,821,326	-		CSW01_13260	0.66	+0.1
2,821,326	-		CSW01_13260	0.66	+0.6
2,821,326	-		CSW01_13260	0.66	-0.1
2,821,326	-		CSW01_13260	0.66	+0.7
2,821,326	-		CSW01_13260	0.66	+0.5
2,821,326	-		CSW01_13260	0.66	+0.3
2,821,326	-		CSW01_13260	0.66	-1.3
2,821,326	-		CSW01_13260	0.66	-0.1
2,821,359	-		CSW01_13260	0.68	-0.5
2,821,382	-		CSW01_13260	0.70	+0.0
2,821,383	-		CSW01_13260	0.70	+0.2
2,821,451	-		CSW01_13260	0.75	-0.3
2,821,465	+		CSW01_13260	0.76	-0.4
2,821,465	+		CSW01_13260	0.76	+0.0
2,821,465	+		CSW01_13260	0.76	-0.5
2,821,473	-		CSW01_13260	0.76	-0.4
2,821,473	-		CSW01_13260	0.76	+0.9
2,821,512	-		CSW01_13260	0.79	+0.4
2,821,604	+		CSW01_13260	0.86	-0.5
2,821,663	-		CSW01_13260	0.90	+0.1
2,821,744	-				+0.2
2,821,788	-				-0.3
2,821,793	-				+0.3
2,821,813	+				-1.8
2,821,814	-				-0.8
2,821,906	+				-0.3
2,821,907	-				-0.2
2,821,913	+				-1.0
2,821,927	+				-0.8
2,821,975	+				+0.1
2,821,993	+				-0.2
2,822,001	-				+0.4
2,822,001	-				+0.2
2,822,029	-				-0.3
2,822,029	-				+0.0
2,822,029	-				+0.7
2,822,106	+				-0.0
2,822,106	+				+0.1
2,822,106	+				+1.3
2,822,106	+				-0.2
2,822,114	-				+0.5
2,822,114	-				+0.1
2,822,212	+		CSW01_13265	0.13	+0.0
2,822,221	-		CSW01_13265	0.13	+0.1
2,822,234	+		CSW01_13265	0.14	-0.5
2,822,234	+		CSW01_13265	0.14	-0.6
2,822,252	-		CSW01_13265	0.14	+0.5
2,822,252	-		CSW01_13265	0.14	+0.3
2,822,342	-		CSW01_13265	0.18	-0.0
2,822,350	+		CSW01_13265	0.18	+0.1
2,822,350	+		CSW01_13265	0.18	-0.3
2,822,458	+		CSW01_13265	0.22	+0.2
2,822,499	+		CSW01_13265	0.24	+0.7
2,822,499	+		CSW01_13265	0.24	-1.3
2,822,530	+		CSW01_13265	0.25	+0.3
2,822,646	+		CSW01_13265	0.29	-0.2
2,822,654	-		CSW01_13265	0.30	+0.6
2,822,654	-		CSW01_13265	0.30	-0.3
2,822,654	-		CSW01_13265	0.30	-0.5
2,822,654	-		CSW01_13265	0.30	+1.1
2,822,716	+		CSW01_13265	0.32	+0.2
2,822,716	+		CSW01_13265	0.32	-1.2
2,822,721	+		CSW01_13265	0.32	+0.3
2,822,724	-		CSW01_13265	0.32	+0.4
2,822,729	-		CSW01_13265	0.33	+0.6
2,822,736	+		CSW01_13265	0.33	+0.3
2,822,736	+		CSW01_13265	0.33	+0.1
2,822,736	+		CSW01_13265	0.33	-2.4
2,822,736	+		CSW01_13265	0.33	+0.9
2,822,736	+		CSW01_13265	0.33	-0.3
2,822,736	-		CSW01_13265	0.33	+0.5
2,822,738	+		CSW01_13265	0.33	-0.5
2,822,738	+		CSW01_13265	0.33	-0.7
2,822,744	-		CSW01_13265	0.33	-0.8
2,822,744	-		CSW01_13265	0.33	+0.1
2,822,744	-		CSW01_13265	0.33	+0.5
2,822,744	-		CSW01_13265	0.33	+0.3
2,822,744	-		CSW01_13265	0.33	-0.2
2,822,744	-		CSW01_13265	0.33	+0.4
2,822,744	-		CSW01_13265	0.33	-0.9